RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 MLNRO43193 412 aa10.15□□□□□ -0.79
CLCN4-203ENST00000421085 MYOD1P15172 320 aa10.15□□□□□ -0.79
CLCN4-203ENST00000421085 TRAV8-3A0A0A6YYJ7 113 aa10.15□□□□□ -0.79
CLCN4-203ENST00000421085 C9JAW5 83 aa10.15□□□□□ -0.79
CLCN4-203ENST00000421085 MBNL3Q9NUK0 354 aaKnown RBP10.15□□□□□ -0.79
CLCN4-203ENST00000421085 PARP14Q460N5 1801 aa10.14□□□□□ -0.79
CLCN4-203ENST00000421085 PF4P02776 101 aa10.14□□□□□ -0.79
CLCN4-203ENST00000421085 AMN1Q8IY45 258 aa10.14□□□□□ -0.79
CLCN4-203ENST00000421085 NEU4Q8WWR8 484 aaPredicted RBP10.14□□□□□ -0.79
CLCN4-203ENST00000421085 MPDZO75970 2070 aa10.14□□□□□ -0.79
CLCN4-203ENST00000421085 FAM186AA6NE01 2351 aa10.14□□□□□ -0.79
CLCN4-203ENST00000421085 IGLV3-12A0A075B6K2 115 aa10.14□□□□□ -0.79
CLCN4-203ENST00000421085 UBR3Q6ZT12 1888 aa10.14□□□□□ -0.79
CLCN4-203ENST00000421085 OVOL1O14753 267 aa10.14□□□□□ -0.79
CLCN4-203ENST00000421085 ZNF474Q6S9Z5 364 aaPredicted RBP10.14□□□□□ -0.79
CLCN4-203ENST00000421085 MESP1Q9BRJ9 268 aa10.14□□□□□ -0.79
CLCN4-203ENST00000421085 RSPO3Q9BXY4 272 aaPredicted RBP10.14□□□□□ -0.79
CLCN4-203ENST00000421085 PNRC2Q9NPJ4 139 aaKnown RBP10.14□□□□□ -0.79
CLCN4-203ENST00000421085 C15orf62A8K5M9 175 aa10.14□□□□□ -0.79
CLCN4-203ENST00000421085 ADARB2-AS1A8MUL3 147 aa10.14□□□□□ -0.79
CLCN4-203ENST00000421085 PFN1P07737 140 aaKnown RBP10.14□□□□□ -0.79
CLCN4-203ENST00000421085 TMEM86BQ8N661 226 aa10.14□□□□□ -0.79
CLCN4-203ENST00000421085 PSME4Q14997 1843 aa10.14□□□□□ -0.79
CLCN4-203ENST00000421085 COLCA1Q6ZS62 124 aa10.14□□□□□ -0.79
CLCN4-203ENST00000421085 ZNF329Q86UD4 541 aa10.14□□□□□ -0.79
CLCN4-203ENST00000421085 Q8TAT8 98 aa10.14□□□□□ -0.79
CLCN4-203ENST00000421085 TRGV9Q99603 122 aa10.14□□□□□ -0.79
CLCN4-203ENST00000421085 IGHV1-18A0A0C4DH31 117 aa10.13□□□□□ -0.79
CLCN4-203ENST00000421085 LINC00473A8K010 186 aa10.13□□□□□ -0.79
CLCN4-203ENST00000421085 LINC00479Q96M42 142 aa10.13□□□□□ -0.79
CLCN4-203ENST00000421085 TRGV11A0A075B6L2 103 aa10.13□□□□□ -0.79
CLCN4-203ENST00000421085 DUSP14O95147 198 aaKnown RBP10.13□□□□□ -0.79
CLCN4-203ENST00000421085 CRPP02741 224 aa10.13□□□□□ -0.79
CLCN4-203ENST00000421085 TOMM40O96008 361 aa10.13□□□□□ -0.79
CLCN4-203ENST00000421085 HTN3P15516 51 aa10.13□□□□□ -0.79
CLCN4-203ENST00000421085 LINC00205P59089 165 aa10.13□□□□□ -0.79
CLCN4-203ENST00000421085 Q6ZRM9 215 aa10.13□□□□□ -0.79
CLCN4-203ENST00000421085 TSSC4Q9Y5U2 329 aaPredicted RBP10.13□□□□□ -0.79
CLCN4-203ENST00000421085 ESPL1Q14674 2120 aa10.13□□□□□ -0.79
CLCN4-203ENST00000421085 ARHGEF17Q96PE2 2063 aaPredicted RBP10.13□□□□□ -0.79
CLCN4-203ENST00000421085 IGHV2-5P01817 119 aa10.13□□□□□ -0.79
CLCN4-203ENST00000421085 SELLP14151 372 aa10.13□□□□□ -0.79
CLCN4-203ENST00000421085 FOXG1P55316 489 aaPredicted RBP10.13□□□□□ -0.79
CLCN4-203ENST00000421085 PAX8Q06710 450 aa10.13□□□□□ -0.79
CLCN4-203ENST00000421085 STHQ8IWL8 128 aa10.13□□□□□ -0.79
CLCN4-203ENST00000421085 RPUSD1Q9UJJ7 312 aaKnown RBP10.12□□□□□ -0.79
CLCN4-203ENST00000421085 ZNF876PQ49A33 203 aa10.12□□□□□ -0.79
CLCN4-203ENST00000421085 S100A7L2Q5SY68 101 aa10.12□□□□□ -0.79
CLCN4-203ENST00000421085 KLHDC3Q9BQ90 382 aa10.12□□□□□ -0.79
CLCN4-203ENST00000421085 COL5A3P25940 1745 aaPredicted RBP10.12□□□□□ -0.79
CLCN4-203ENST00000421085 PINLYPA6NC86 204 aa10.12□□□□□ -0.79
CLCN4-203ENST00000421085 IGLC2P0DOY2 106 aa10.12□□□□□ -0.79
CLCN4-203ENST00000421085 IGLC3P0DOY3 106 aa10.12□□□□□ -0.79
CLCN4-203ENST00000421085 C18orf32Q8TCD1 76 aa10.12□□□□□ -0.79
CLCN4-203ENST00000421085 KLF12Q9Y4X4 402 aa10.12□□□□□ -0.79
CLCN4-203ENST00000421085 IGHV3-73A0A0B4J1V6 119 aa10.12□□□□□ -0.79
CLCN4-203ENST00000421085 TRAV40A0A0B4J280 105 aa10.12□□□□□ -0.79
CLCN4-203ENST00000421085 Q6ZWC4 215 aa10.12□□□□□ -0.79
CLCN4-203ENST00000421085 CSTL1Q9H114 145 aa10.12□□□□□ -0.79
CLCN4-203ENST00000421085 PEMTQ9UBM1 199 aa10.12□□□□□ -0.79
CLCN4-203ENST00000421085 A0A1B0GWJ7 208 aa10.11□□□□□ -0.79
CLCN4-203ENST00000421085 C9orf118A6NHY6 69 aa10.11□□□□□ -0.79
CLCN4-203ENST00000421085 LYNX1G3V0Z9 82 aa10.11□□□□□ -0.79
CLCN4-203ENST00000421085 LYNX1P0DP58 116 aa10.11□□□□□ -0.79
CLCN4-203ENST00000421085 CITED1Q99966 193 aa10.11□□□□□ -0.79
CLCN4-203ENST00000421085 METRNQ9UJH8 293 aa10.11□□□□□ -0.79
CLCN4-203ENST00000421085 TEX43Q6ZNM6 134 aa10.11□□□□□ -0.79
CLCN4-203ENST00000421085 VWCEQ96DN2 955 aa10.11□□□□□ -0.79
CLCN4-203ENST00000421085 DPH3P1Q9H4G8 78 aa10.11□□□□□ -0.79
CLCN4-203ENST00000421085 FREM3P0C091 2139 aa10.11□□□□□ -0.79
CLCN4-203ENST00000421085 ITGB1BP1O14713 200 aa10.11□□□□□ -0.79
CLCN4-203ENST00000421085 CD177Q8N6Q3 437 aa10.11□□□□□ -0.79
CLCN4-203ENST00000421085 TMEM190Q8WZ59 177 aa10.11□□□□□ -0.79
CLCN4-203ENST00000421085 C7orf69Q9H7B7 122 aa10.11□□□□□ -0.79
CLCN4-203ENST00000421085 ZNF318Q5VUA4 2279 aa10.11□□□□□ -0.79
CLCN4-203ENST00000421085 LOC102723996A0A087X1L8 192 aa10.11□□□□□ -0.79
CLCN4-203ENST00000421085 PAX4O43316 350 aa10.11□□□□□ -0.79
CLCN4-203ENST00000421085 IGHV1-46P01743 117 aa10.11□□□□□ -0.79
CLCN4-203ENST00000421085 C10orf91Q5T1B1 145 aa10.11□□□□□ -0.79
CLCN4-203ENST00000421085 GAGE2AQ6NT46 116 aa10.11□□□□□ -0.79
CLCN4-203ENST00000421085 PLSCR4Q9NRQ2 329 aa10.11□□□□□ -0.79
CLCN4-203ENST00000421085 IGFL4Q6B9Z1 124 aa10.1□□□□□ -0.79
CLCN4-203ENST00000421085 A0A1W2PRX2 142 aa10.1□□□□□ -0.79
CLCN4-203ENST00000421085 C14orf178Q8N769 122 aaPredicted RBP10.1□□□□□ -0.79
CLCN4-203ENST00000421085 TRGV4A0A0C4DH28 118 aa10.1□□□□□ -0.79
CLCN4-203ENST00000421085 VCYO14598 125 aa10.1□□□□□ -0.79
CLCN4-203ENST00000421085 C9orf153Q5TBE3 101 aa10.1□□□□□ -0.79
CLCN4-203ENST00000421085 GAGE1Q13065 139 aa10.1□□□□□ -0.79
CLCN4-203ENST00000421085 ZNF625Q96I27 306 aaPredicted RBP10.1□□□□□ -0.79
CLCN4-203ENST00000421085 WNK3Q9BYP7 1800 aa10.1□□□□□ -0.79
CLCN4-203ENST00000421085 SRRM5B3KS81 715 aa10.1□□□□□ -0.79
CLCN4-203ENST00000421085 SP9P0CG40 484 aa10.1□□□□□ -0.79
CLCN4-203ENST00000421085 MLANAQ16655 118 aa10.1□□□□□ -0.79
CLCN4-203ENST00000421085 CHCHD5Q9BSY4 110 aa10.1□□□□□ -0.79
CLCN4-203ENST00000421085 GFRA4Q9GZZ7 299 aa10.1□□□□□ -0.79
CLCN4-203ENST00000421085 K7EP13 123 aa10.09□□□□□ -0.79
CLCN4-203ENST00000421085 SPRR3Q9UBC9 169 aa10.09□□□□□ -0.79
CLCN4-203ENST00000421085 LAMTOR3Q9UHA4 124 aa10.09□□□□□ -0.79
CLCN4-203ENST00000421085 LINC00527Q9UJ94 153 aa10.09□□□□□ -0.79
CLCN4-203ENST00000421085 PDCD11Q14690 1871 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms