RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 EIF2B2P49770 351 aaKnown RBP9.08□□□□□ -0.96
LINC00339-203ENST00000420503 NUTF2P61970 127 aaKnown RBP9.08□□□□□ -0.96
LINC00339-203ENST00000420503 ZNF90Q03938 601 aa9.08□□□□□ -0.96
LINC00339-203ENST00000420503 TRIQKQ629K1 86 aa9.08□□□□□ -0.96
LINC00339-203ENST00000420503 SELENOHQ8IZQ5 122 aaKnown RBP9.08□□□□□ -0.96
LINC00339-203ENST00000420503 MAPKAPK5-AS1Q8N8E1 139 aa9.08□□□□□ -0.96
LINC00339-203ENST00000420503 GLYATL2Q8WU03 294 aa9.08□□□□□ -0.96
LINC00339-203ENST00000420503 S100ZQ8WXG8 99 aa9.08□□□□□ -0.96
LINC00339-203ENST00000420503 RRNAD1Q96FB5 475 aaKnown RBP9.08□□□□□ -0.96
LINC00339-203ENST00000420503 C17orf77Q96MU5 243 aa9.08□□□□□ -0.96
LINC00339-203ENST00000420503 DNAH5Q8TE73 4624 aa9.07□□□□□ -0.96
LINC00339-203ENST00000420503 HERC1Q15751 4861 aa9.07□□□□□ -0.96
LINC00339-203ENST00000420503 IGKV1D-37A0A075B6S9 117 aa9.07□□□□□ -0.96
LINC00339-203ENST00000420503 CEBPZOSA8MTT3 80 aa9.07□□□□□ -0.96
LINC00339-203ENST00000420503 SLC25A4P12235 298 aa9.07□□□□□ -0.96
LINC00339-203ENST00000420503 BTCP35070 178 aa9.07□□□□□ -0.96
LINC00339-203ENST00000420503 AP2S1P53680 142 aaPredicted RBP9.07□□□□□ -0.96
LINC00339-203ENST00000420503 RNF125Q96EQ8 232 aa9.07□□□□□ -0.96
LINC00339-203ENST00000420503 CCDC32Q9BV29 185 aa9.07□□□□□ -0.96
LINC00339-203ENST00000420503 TMEM222Q9H0R3 208 aa9.07□□□□□ -0.96
LINC00339-203ENST00000420503 CRYM-AS1A6NIL9 109 aa9.06□□□□□ -0.96
LINC00339-203ENST00000420503 PLA2G10O15496 165 aa9.06□□□□□ -0.96
LINC00339-203ENST00000420503 CDS2O95674 445 aa9.06□□□□□ -0.96
LINC00339-203ENST00000420503 FCN2Q15485 313 aa9.06□□□□□ -0.96
LINC00339-203ENST00000420503 FAM78BQ5VT40 261 aa9.06□□□□□ -0.96
LINC00339-203ENST00000420503 TMEM268Q5VZI3 342 aa9.06□□□□□ -0.96
LINC00339-203ENST00000420503 FOXI2Q6ZQN5 318 aa9.06□□□□□ -0.96
LINC00339-203ENST00000420503 CCDC71LQ8N9Z2 235 aa9.06□□□□□ -0.96
LINC00339-203ENST00000420503 OR52E5Q8NH55 327 aa9.06□□□□□ -0.96
LINC00339-203ENST00000420503 RNASEH2CQ8TDP1 164 aaKnown RBP9.06□□□□□ -0.96
LINC00339-203ENST00000420503 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.06□□□□□ -0.96
LINC00339-203ENST00000420503 C14orf166Q9Y224 244 aaKnown RBP9.06□□□□□ -0.96
LINC00339-203ENST00000420503 TMEM189A5PLL7 270 aa9.05□□□□□ -0.96
LINC00339-203ENST00000420503 NAP1L6A6NFF2 107 aa9.05□□□□□ -0.96
LINC00339-203ENST00000420503 SMIM9A6NGZ8 99 aa9.05□□□□□ -0.96
LINC00339-203ENST00000420503 ZNF705GA8MUZ8 300 aaPredicted RBP9.05□□□□□ -0.96
LINC00339-203ENST00000420503 SCGB2A1O75556 95 aa9.05□□□□□ -0.96
LINC00339-203ENST00000420503 B3GALNT1O75752 331 aa9.05□□□□□ -0.96
LINC00339-203ENST00000420503 ATG12O94817 140 aa9.05□□□□□ -0.96
LINC00339-203ENST00000420503 INPP1P49441 399 aa9.05□□□□□ -0.96
LINC00339-203ENST00000420503 SUPT4H1P63272 117 aaKnown RBP9.05□□□□□ -0.96
LINC00339-203ENST00000420503 OR2F1Q13607 317 aa9.05□□□□□ -0.96
LINC00339-203ENST00000420503 RNF212Q495C1 297 aa9.05□□□□□ -0.96
LINC00339-203ENST00000420503 NMSQ5H8A3 153 aa9.05□□□□□ -0.96
LINC00339-203ENST00000420503 SCGB3A2Q96PL1 93 aa9.05□□□□□ -0.96
LINC00339-203ENST00000420503 SLC25A21Q9BQT8 299 aaPredicted RBP9.05□□□□□ -0.96
LINC00339-203ENST00000420503 C7orf50Q9BRJ6 194 aaKnown RBP9.05□□□□□ -0.96
LINC00339-203ENST00000420503 NAA60Q9H7X0 242 aa9.05□□□□□ -0.96
LINC00339-203ENST00000420503 SEPSECSQ9HD40 501 aaKnown RBP9.05□□□□□ -0.96
LINC00339-203ENST00000420503 TEX13DA0A0J9YY54 714 aaPredicted RBP9.04□□□□□ -0.96
LINC00339-203ENST00000420503 HBE1P02100 147 aa9.04□□□□□ -0.96
LINC00339-203ENST00000420503 CCR6P51684 374 aa9.04□□□□□ -0.96
LINC00339-203ENST00000420503 LYZP61626 148 aa9.04□□□□□ -0.96
LINC00339-203ENST00000420503 DAD1P61803 113 aa9.04□□□□□ -0.96
LINC00339-203ENST00000420503 PSG9Q00887 426 aa9.04□□□□□ -0.96
LINC00339-203ENST00000420503 SOHLH1Q5JUK2 328 aa9.04□□□□□ -0.96
LINC00339-203ENST00000420503 IGFL4Q6B9Z1 124 aa9.04□□□□□ -0.96
LINC00339-203ENST00000420503 AMTNQ6UX39 209 aa9.04□□□□□ -0.96
LINC00339-203ENST00000420503 ZNRF2Q8NHG8 242 aa9.04□□□□□ -0.96
LINC00339-203ENST00000420503 COQ8AQ8NI60 647 aa9.04□□□□□ -0.96
LINC00339-203ENST00000420503 RBPMSQ93062 196 aaKnown RBP9.04□□□□□ -0.96
LINC00339-203ENST00000420503 FAM210BQ96KR6 192 aa9.04□□□□□ -0.96
LINC00339-203ENST00000420503 A0A0J9YX75 114 aa9.03□□□□□ -0.96
LINC00339-203ENST00000420503 NBDYA0A0U1RRE5 68 aa9.03□□□□□ -0.96
LINC00339-203ENST00000420503 M0R2Z0 102 aa9.03□□□□□ -0.96
LINC00339-203ENST00000420503 CDK2AP2O75956 126 aa9.03□□□□□ -0.96
LINC00339-203ENST00000420503 NDUFB6O95139 128 aa9.03□□□□□ -0.96
LINC00339-203ENST00000420503 PSMB3P49720 205 aa9.03□□□□□ -0.96
LINC00339-203ENST00000420503 GAMTQ14353 236 aa9.03□□□□□ -0.96
LINC00339-203ENST00000420503 ZNF846Q147U1 533 aa9.03□□□□□ -0.96
LINC00339-203ENST00000420503 KRTAP1-5Q9BYS1 174 aa9.03□□□□□ -0.96
LINC00339-203ENST00000420503 GOLT1BQ9Y3E0 138 aa9.03□□□□□ -0.96
LINC00339-203ENST00000420503 IGKV1OR2-108A0A075B7D4 117 aa9.02□□□□□ -0.97
LINC00339-203ENST00000420503 LINC00854A0A1B0GVQ3 168 aa9.02□□□□□ -0.97
LINC00339-203ENST00000420503 PLAC8L1A1L4L8 177 aa9.02□□□□□ -0.97
LINC00339-203ENST00000420503 CENPXA8MT69 81 aa9.02□□□□□ -0.97
LINC00339-203ENST00000420503 CRXO43186 299 aaPredicted RBP9.02□□□□□ -0.97
LINC00339-203ENST00000420503 LYRM1O43325 122 aa9.02□□□□□ -0.97
LINC00339-203ENST00000420503 DEFB130BP0DP73 79 aa9.02□□□□□ -0.97
LINC00339-203ENST00000420503 DEFB130AP0DP74 79 aa9.02□□□□□ -0.97
LINC00339-203ENST00000420503 AKR1C4P17516 323 aa9.02□□□□□ -0.97
LINC00339-203ENST00000420503 AZU1P20160 251 aa9.02□□□□□ -0.97
LINC00339-203ENST00000420503 PAX9P55771 341 aa9.02□□□□□ -0.97
LINC00339-203ENST00000420503 IFITM3Q01628 133 aa9.02□□□□□ -0.97
LINC00339-203ENST00000420503 OXA1LQ15070 435 aa9.02□□□□□ -0.97
LINC00339-203ENST00000420503 RRN3P1Q2M238 152 aa9.02□□□□□ -0.97
LINC00339-203ENST00000420503 TMEM128Q5BJH2 165 aa9.02□□□□□ -0.97
LINC00339-203ENST00000420503 FAM219AQ8IW50 185 aa9.02□□□□□ -0.97
LINC00339-203ENST00000420503 BAP18Q8IXM2 172 aa9.02□□□□□ -0.97
LINC00339-203ENST00000420503 SLC25A32Q9H2D1 315 aa9.02□□□□□ -0.97
LINC00339-203ENST00000420503 RBKSQ9H477 322 aa9.02□□□□□ -0.97
LINC00339-203ENST00000420503 TMED3Q9Y3Q3 217 aa9.02□□□□□ -0.97
LINC00339-203ENST00000420503 TMEM56-RWDD3S4R434 201 aa9.02□□□□□ -0.97
LINC00339-203ENST00000420503 ZFP92A6NM28 416 aa9.01□□□□□ -0.97
LINC00339-203ENST00000420503 UPK1BO75841 260 aa9.01□□□□□ -0.97
LINC00339-203ENST00000420503 NUDT3O95989 172 aa9.01□□□□□ -0.97
LINC00339-203ENST00000420503 KRTAP10-2P60368 255 aa9.01□□□□□ -0.97
LINC00339-203ENST00000420503 SPINK13Q1W4C9 94 aa9.01□□□□□ -0.97
LINC00339-203ENST00000420503 ETFRF1Q6IPR1 90 aa9.01□□□□□ -0.97
LINC00339-203ENST00000420503 TMEM182Q6ZP80 229 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms