RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 FXYD2P54710 66 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 SSBP2P81877 361 aaPredicted RBP6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 IL11RAQ14626 422 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 FAM106AQ4KMX7 169 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 TM4SF20Q53R12 229 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 TMEM164Q5U3C3 297 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 STXBP6Q8NFX7 210 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 SPAG8Q99932 426 aaPredicted RBP6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 BOKQ9UMX3 212 aaPredicted RBP6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 DNAJC13O75165 2243 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 PCNX2A6NKB5 2137 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 CT45A6P0DMU7 189 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 CT45A5P0DMU8 189 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 CT45A7P0DMV0 189 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 COL8A1P27658 744 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 PRDX2P32119 198 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 MPV17P39210 176 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 Q0VFX4 171 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 CT45A1Q5HYN5 189 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 UTF1Q5T230 341 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 CT45A3Q8NHU0 189 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 HIGD1BQ9P298 99 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 F11RQ9Y624 299 aaKnown RBP6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 TCRBV4S1A1TA0A5B7 111 aa6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 CT45A10P0DMU9 189 aa6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 GCSHP23434 173 aa6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 IFI27P40305 119 aaPredicted RBP6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 CYB561P49447 251 aa6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 LOXL1Q08397 574 aaPredicted RBP6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 LINC00305Q7Z4B0 112 aa6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 BCL6BQ8N143 479 aaPredicted RBP6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 KLF14Q8TD94 323 aaPredicted RBP6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 NBEAQ8NFP9 2946 aa6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 LY6G6EA0A0G2JKS1 128 aa6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 A0A1W2PRD5 423 aa6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 A0A1W2PRF3 423 aa6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 A0A1W2PRM7 423 aa6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 TCRAP04437 139 aa6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 PIFOQ8TCI5 191 aa6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 LEAP2Q969E1 77 aa6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 C12orf49Q9H741 205 aa6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 U3KQA8 63 aa6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 FAM186AA6NE01 2351 aa6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 CACNA1EQ15878 2313 aa6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 PLAUP00749 431 aa6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 ARMS2P0C7Q2 107 aa6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 FOLR3P41439 243 aa6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 RIGQ13278 110 aa6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 ZNF414Q96IQ9 312 aa6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 GEMIN7Q9H840 131 aaKnown RBP6.44□□□□□ -1.38
HMGXB4-202ENST00000418170 IGKV1D-37A0A075B6S9 117 aa6.43□□□□□ -1.38
HMGXB4-202ENST00000418170 PRR33A8MZF0 331 aa6.43□□□□□ -1.38
HMGXB4-202ENST00000418170 E9PLD3 99 aa6.43□□□□□ -1.38
HMGXB4-202ENST00000418170 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.43□□□□□ -1.38
HMGXB4-202ENST00000418170 DSCAML1Q8TD84 2053 aa6.43□□□□□ -1.38
HMGXB4-202ENST00000418170 A0A1B0GW15 77 aa6.43□□□□□ -1.38
HMGXB4-202ENST00000418170 K7ERJ3 54 aa6.43□□□□□ -1.38
HMGXB4-202ENST00000418170 K7ESF4 209 aa6.43□□□□□ -1.38
HMGXB4-202ENST00000418170 KIR2DL2P43627 348 aaPredicted RBP6.43□□□□□ -1.38
HMGXB4-202ENST00000418170 MTURNQ8N3F0 131 aa6.43□□□□□ -1.38
HMGXB4-202ENST00000418170 DUSP23Q9BVJ7 150 aa6.43□□□□□ -1.38
HMGXB4-202ENST00000418170 CALYQ9NYX4 217 aa6.43□□□□□ -1.38
HMGXB4-202ENST00000418170 ETDBQ3ZM63 59 aa6.43□□□□□ -1.38
HMGXB4-202ENST00000418170 Q86TA4 180 aa6.43□□□□□ -1.38
HMGXB4-202ENST00000418170 MRPL16Q9NX20 251 aaKnown RBP6.43□□□□□ -1.38
HMGXB4-202ENST00000418170 TANC2Q9HCD6 1990 aa6.43□□□□□ -1.38
HMGXB4-202ENST00000418170 IGKV1D-17A0A075B6S4 117 aa6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 KBTBD11-OT1A0A1B0GTJ5 212 aa6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 SH2D6Q7Z4S9 175 aa6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 THAP8Q8NA92 274 aa6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 NPIPB3Q92617 1050 aa6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 HBDP02042 147 aa6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 IGKV1-16P04430 117 aa6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 SPINK14Q6IE38 97 aa6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 CIARTQ8N365 385 aaPredicted RBP6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 RBMXL3Q8N7X1 1067 aaKnown RBP6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 ARPC1AQ92747 370 aa6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 IFI27L1Q96BM0 104 aa6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 CGB3P0DN86 165 aa6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 CGB7P0DN87 165 aa6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 CFHR2P36980 270 aa6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 PAX8Q06710 450 aa6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 PSMG4Q5JS54 123 aa6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 HES3Q5TGS1 186 aa6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 ABHD17BQ5VST6 288 aa6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 PPP1R35Q8TAP8 253 aa6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 CHAC1Q9BUX1 264 aa6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 TM2D2Q9BX73 214 aa6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 NDUFA4L2Q9NRX3 87 aa6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 B4GALT7Q9UBV7 327 aa6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 COLQQ9Y215 455 aaPredicted RBP6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 SAA1P0DJI8 122 aaPredicted RBP6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 ERHP84090 104 aaKnown RBP6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 FAM173AQ9BQD7 235 aa6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 Q9H3A6 140 aa6.42□□□□□ -1.38
HMGXB4-202ENST00000418170 INS-IGF2F8WCM5 200 aa6.41□□□□□ -1.38
HMGXB4-202ENST00000418170 GP9P14770 177 aa6.41□□□□□ -1.38
HMGXB4-202ENST00000418170 C17orf58Q2M2W7 97 aa6.41□□□□□ -1.38
HMGXB4-202ENST00000418170 ZNF493Q6ZR52 646 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms