RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 OR13C8Q8NGS7 320 aa5.49□□□□□ -1.53
HLA-DPA1-241ENST00000417724 GPR146Q96CH1 333 aa5.49□□□□□ -1.53
HLA-DPA1-241ENST00000417724 C16orf92Q96LL3 132 aa5.49□□□□□ -1.53
HLA-DPA1-241ENST00000417724 A0A1W2PPQ1 181 aa5.48□□□□□ -1.53
HLA-DPA1-241ENST00000417724 PRM2P04554 102 aa5.48□□□□□ -1.53
HLA-DPA1-241ENST00000417724 ELK1P19419 428 aa5.48□□□□□ -1.53
HLA-DPA1-241ENST00000417724 GPX4P36969 197 aaPredicted RBP5.48□□□□□ -1.53
HLA-DPA1-241ENST00000417724 GALR1P47211 349 aa5.48□□□□□ -1.53
HLA-DPA1-241ENST00000417724 LYZP61626 148 aa5.48□□□□□ -1.53
HLA-DPA1-241ENST00000417724 LSM3P62310 102 aaKnown RBP5.48□□□□□ -1.53
HLA-DPA1-241ENST00000417724 ZNF90Q03938 601 aa5.48□□□□□ -1.53
HLA-DPA1-241ENST00000417724 MEF2DQ14814 521 aa5.48□□□□□ -1.53
HLA-DPA1-241ENST00000417724 FCN2Q15485 313 aa5.48□□□□□ -1.53
HLA-DPA1-241ENST00000417724 SPINK13Q1W4C9 94 aa5.48□□□□□ -1.53
HLA-DPA1-241ENST00000417724 SCGB2B2Q4G0G5 96 aa5.48□□□□□ -1.53
HLA-DPA1-241ENST00000417724 TMEM268Q5VZI3 342 aa5.48□□□□□ -1.53
HLA-DPA1-241ENST00000417724 SELENOHQ8IZQ5 122 aaKnown RBP5.48□□□□□ -1.53
HLA-DPA1-241ENST00000417724 LGI3Q8N145 548 aa5.48□□□□□ -1.53
HLA-DPA1-241ENST00000417724 MARCH1Q8TCQ1 289 aa5.48□□□□□ -1.53
HLA-DPA1-241ENST00000417724 RNF141Q8WVD5 230 aa5.48□□□□□ -1.53
HLA-DPA1-241ENST00000417724 RSG1Q9BU20 258 aa5.48□□□□□ -1.53
HLA-DPA1-241ENST00000417724 Q9H3A6 140 aa5.48□□□□□ -1.53
HLA-DPA1-241ENST00000417724 PTTG2Q9NZH5 202 aa5.48□□□□□ -1.53
HLA-DPA1-241ENST00000417724 C14orf166Q9Y224 244 aaKnown RBP5.48□□□□□ -1.53
HLA-DPA1-241ENST00000417724 M0R2Z0 102 aa5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 CRXO43186 299 aaPredicted RBP5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 HPGDSO60760 199 aa5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 RAB3DO95716 219 aa5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 CFDP00746 253 aaPredicted RBP5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 SULT1A3P0DMM9 295 aa5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 SULT1A4P0DMN0 295 aa5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 ZNF182P17025 639 aaPredicted RBP5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 AZU1P20160 251 aa5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 CNN1P51911 297 aaKnown RBP5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 OR2F1Q13607 317 aa5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 GAMTQ14353 236 aa5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 RNASE12Q5GAN4 147 aaKnown RBP5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 GGNBP1Q5YKI7 109 aa5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 TMEM256Q8N2U0 113 aa5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 OR11H7Q8NGC8 314 aa5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 OR52I2Q8NH67 350 aa5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 LHFPL5Q8TAF8 219 aa5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 GNPNAT1Q96EK6 184 aaPredicted RBP5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 ZNF503Q96F45 646 aa5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 SLC35E1Q96K37 410 aa5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 C20orf173Q96LM9 149 aa5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 LINC01587Q99440 93 aa5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 NAA60Q9H7X0 242 aa5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 PGPEP1Q9NXJ5 209 aa5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 MTFP1Q9UDX5 166 aa5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 TIMM8BQ9Y5J9 83 aaPredicted RBP5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 LRP1BQ9NZR2 4599 aa5.47□□□□□ -1.53
HLA-DPA1-241ENST00000417724 IGKV1D-37A0A075B6S9 117 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 PLAC8L1A1L4L8 177 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 FAM25AB3EWG3 89 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 FAM25CB3EWG5 89 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 FAM25GB3EWG6 89 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 HTN1P15515 57 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 S100A7P31151 101 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 TAS2R19P59542 299 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 TAS2R60P59551 318 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 DLK1P80370 383 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 OR5I1Q13606 314 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 SURF2Q15527 256 aaPredicted RBP5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 GPR107Q5VW38 600 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 MZT2AQ6P582 158 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 ZNF493Q6ZR52 646 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 LYPD1Q8N2G4 141 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 TMEM229BQ8NBD8 167 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 OR4D10Q8NGI6 311 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 OR4D5Q8NGN0 318 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 OR1B1Q8NGR6 318 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 OR10J6PQ8NGY7 276 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 DTD1Q8TEA8 209 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 C15orf40Q8WUR7 153 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 YIPF6Q96EC8 236 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 C16orf74Q96GX8 76 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 GPR82Q96P67 336 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 TRGV9Q99603 122 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 RTBDNQ9BSG5 229 aaPredicted RBP5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 KRTAP1-5Q9BYS1 174 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 SLC25A22Q9H936 323 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 PPP1R14DQ9NXH3 145 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 HSPB7Q9UBY9 170 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 SLC45A2Q9UMX9 530 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 KCNIP3Q9Y2W7 256 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 TMEM56-RWDD3S4R434 201 aa5.46□□□□□ -1.54
HLA-DPA1-241ENST00000417724 TRAV12-2A0A075B6T6 113 aa5.45□□□□□ -1.54
HLA-DPA1-241ENST00000417724 TRAV26-1A0A087WT03 109 aa5.45□□□□□ -1.54
HLA-DPA1-241ENST00000417724 ZNF98A6NK75 572 aa5.45□□□□□ -1.54
HLA-DPA1-241ENST00000417724 BOLA2-SMG1P6H3BVE0 249 aa5.45□□□□□ -1.54
HLA-DPA1-241ENST00000417724 EREGO14944 169 aa5.45□□□□□ -1.54
HLA-DPA1-241ENST00000417724 ADAP1O75689 374 aa5.45□□□□□ -1.54
HLA-DPA1-241ENST00000417724 M6PRP20645 277 aa5.45□□□□□ -1.54
HLA-DPA1-241ENST00000417724 CCR6P51684 374 aa5.45□□□□□ -1.54
HLA-DPA1-241ENST00000417724 RHOBP62745 196 aa5.45□□□□□ -1.54
HLA-DPA1-241ENST00000417724 STEAP1BQ6NZ63 245 aa5.45□□□□□ -1.54
HLA-DPA1-241ENST00000417724 TMEM144Q7Z5S9 345 aa5.45□□□□□ -1.54
HLA-DPA1-241ENST00000417724 BAP18Q8IXM2 172 aa5.45□□□□□ -1.54
HLA-DPA1-241ENST00000417724 RXFP4Q8TDU9 374 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms