RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 B9D2Q9BPU9 175 aa9.32□□□□□ -0.92
SKA1-203ENST00000417656 RNF126Q9BV68 326 aa9.32□□□□□ -0.92
SKA1-203ENST00000417656 SLC25A31Q9H0C2 315 aa9.32□□□□□ -0.92
SKA1-203ENST00000417656 UQCC1Q9NVA1 299 aa9.32□□□□□ -0.92
SKA1-203ENST00000417656 C19orf73Q9NVV2 129 aa9.32□□□□□ -0.92
SKA1-203ENST00000417656 DOK5Q9P104 306 aa9.32□□□□□ -0.92
SKA1-203ENST00000417656 OR11H12B2RN74 326 aa9.31□□□□□ -0.92
SKA1-203ENST00000417656 AGPAT2O15120 278 aa9.31□□□□□ -0.92
SKA1-203ENST00000417656 BUB3O43684 328 aa9.31□□□□□ -0.92
SKA1-203ENST00000417656 CFDP00746 253 aaPredicted RBP9.31□□□□□ -0.92
SKA1-203ENST00000417656 CD5P06127 495 aa9.31□□□□□ -0.92
SKA1-203ENST00000417656 ORM2P19652 201 aa9.31□□□□□ -0.92
SKA1-203ENST00000417656 S100A11P31949 105 aa9.31□□□□□ -0.92
SKA1-203ENST00000417656 NUP62P37198 522 aaPredicted RBP9.31□□□□□ -0.92
SKA1-203ENST00000417656 NHLH2Q02577 135 aa9.31□□□□□ -0.92
SKA1-203ENST00000417656 ZNF546Q86UE3 836 aa9.31□□□□□ -0.92
SKA1-203ENST00000417656 WFDC3Q8IUB2 231 aa9.31□□□□□ -0.92
SKA1-203ENST00000417656 STXBP6Q8NFX7 210 aa9.31□□□□□ -0.92
SKA1-203ENST00000417656 OR1B1Q8NGR6 318 aa9.31□□□□□ -0.92
SKA1-203ENST00000417656 PPP1R14BQ96C90 147 aa9.31□□□□□ -0.92
SKA1-203ENST00000417656 ASCL2Q99929 193 aa9.31□□□□□ -0.92
SKA1-203ENST00000417656 MS4A6AQ9H2W1 248 aa9.31□□□□□ -0.92
SKA1-203ENST00000417656 SRD5A3Q9H8P0 318 aa9.31□□□□□ -0.92
SKA1-203ENST00000417656 WDR83OSQ9Y284 106 aa9.31□□□□□ -0.92
SKA1-203ENST00000417656 A8MZ25 164 aa9.3□□□□□ -0.92
SKA1-203ENST00000417656 GIPP09681 153 aaPredicted RBP9.3□□□□□ -0.92
SKA1-203ENST00000417656 SELENOTP62341 195 aa9.3□□□□□ -0.92
SKA1-203ENST00000417656 BAXQ07812 192 aa9.3□□□□□ -0.92
SKA1-203ENST00000417656 CLINT1Q14677 625 aa9.3□□□□□ -0.92
SKA1-203ENST00000417656 SIGLEC15Q6ZMC9 328 aa9.3□□□□□ -0.92
SKA1-203ENST00000417656 FAM24BQ8N5W8 94 aa9.3□□□□□ -0.92
SKA1-203ENST00000417656 OR5C1Q8NGR4 320 aa9.3□□□□□ -0.92
SKA1-203ENST00000417656 GGTLC1Q9BX51 225 aa9.3□□□□□ -0.92
SKA1-203ENST00000417656 TUBA4BQ9H853 241 aa9.3□□□□□ -0.92
SKA1-203ENST00000417656 DNAH9Q9NYC9 4486 aa9.3□□□□□ -0.92
SKA1-203ENST00000417656 HELTA6NFD8 242 aa9.29□□□□□ -0.92
SKA1-203ENST00000417656 DNASE2O00115 360 aaPredicted RBP9.29□□□□□ -0.92
SKA1-203ENST00000417656 FGF7P21781 194 aa9.29□□□□□ -0.92
SKA1-203ENST00000417656 CAMLGP49069 296 aa9.29□□□□□ -0.92
SKA1-203ENST00000417656 PAFAH1B2P68402 229 aa9.29□□□□□ -0.92
SKA1-203ENST00000417656 THAP6Q8TBB0 222 aa9.29□□□□□ -0.92
SKA1-203ENST00000417656 SCRT1Q9BWW7 348 aa9.29□□□□□ -0.92
SKA1-203ENST00000417656 MAP6D1Q9H9H5 199 aa9.29□□□□□ -0.92
SKA1-203ENST00000417656 PFDN2Q9UHV9 154 aa9.29□□□□□ -0.92
SKA1-203ENST00000417656 SLC45A2Q9UMX9 530 aa9.29□□□□□ -0.92
SKA1-203ENST00000417656 HSPB11Q9Y547 144 aa9.29□□□□□ -0.92
SKA1-203ENST00000417656 TRAV2A0A0B4J234 112 aa9.28□□□□□ -0.92
SKA1-203ENST00000417656 RBMY1BA6NDE4 496 aaKnown RBP9.28□□□□□ -0.92
SKA1-203ENST00000417656 RBMY1EA6NEQ0 496 aaKnown RBP9.28□□□□□ -0.92
SKA1-203ENST00000417656 H3BRN7 92 aa9.28□□□□□ -0.92
SKA1-203ENST00000417656 K7EQG2 157 aa9.28□□□□□ -0.92
SKA1-203ENST00000417656 HYPMO75409 117 aa9.28□□□□□ -0.92
SKA1-203ENST00000417656 OR5G3P0C626 314 aa9.28□□□□□ -0.92
SKA1-203ENST00000417656 RBMY1DP0C7P1 496 aaKnown RBP9.28□□□□□ -0.92
SKA1-203ENST00000417656 LYL1P12980 280 aa9.28□□□□□ -0.92
SKA1-203ENST00000417656 RPL12P30050 165 aaKnown RBP9.28□□□□□ -0.92
SKA1-203ENST00000417656 PLP1P60201 277 aa9.28□□□□□ -0.92
SKA1-203ENST00000417656 RAP2BP61225 183 aa9.28□□□□□ -0.92
SKA1-203ENST00000417656 OPCMLQ14982 345 aa9.28□□□□□ -0.92
SKA1-203ENST00000417656 ZNF124Q15973 351 aa9.28□□□□□ -0.92
SKA1-203ENST00000417656 ATP6V1FQ16864 119 aa9.28□□□□□ -0.92
SKA1-203ENST00000417656 MIC13Q5XKP0 118 aa9.28□□□□□ -0.92
SKA1-203ENST00000417656 SBSPONQ8IVN8 264 aa9.28□□□□□ -0.92
SKA1-203ENST00000417656 DCANP1Q8TF63 244 aa9.28□□□□□ -0.92
SKA1-203ENST00000417656 UHRF2Q96PU4 802 aa9.28□□□□□ -0.92
SKA1-203ENST00000417656 CITED4Q96RK1 184 aa9.28□□□□□ -0.92
SKA1-203ENST00000417656 SMIM3Q9BZL3 60 aa9.28□□□□□ -0.92
SKA1-203ENST00000417656 ARL6Q9H0F7 186 aa9.28□□□□□ -0.92
SKA1-203ENST00000417656 SLC25A32Q9H2D1 315 aa9.28□□□□□ -0.92
SKA1-203ENST00000417656 SLC25A22Q9H936 323 aa9.28□□□□□ -0.92
SKA1-203ENST00000417656 HIGD1AQ9Y241 93 aa9.28□□□□□ -0.92
SKA1-203ENST00000417656 ZNF98A6NK75 572 aa9.27□□□□□ -0.93
SKA1-203ENST00000417656 RAB31Q13636 194 aa9.27□□□□□ -0.93
SKA1-203ENST00000417656 Q5BKY6 102 aa9.27□□□□□ -0.93
SKA1-203ENST00000417656 C1orf194Q5T5A4 169 aa9.27□□□□□ -0.93
SKA1-203ENST00000417656 LEMD1Q68G75 181 aa9.27□□□□□ -0.93
SKA1-203ENST00000417656 PATE2Q6UY27 113 aa9.27□□□□□ -0.93
SKA1-203ENST00000417656 APRG1Q8IVJ8 170 aa9.27□□□□□ -0.93
SKA1-203ENST00000417656 OR8I2Q8N0Y5 310 aa9.27□□□□□ -0.93
SKA1-203ENST00000417656 ASB13Q8WXK3 278 aa9.27□□□□□ -0.93
SKA1-203ENST00000417656 SHANK2-AS3Q9BTD1 123 aa9.27□□□□□ -0.93
SKA1-203ENST00000417656 SLC25A39Q9BZJ4 359 aaPredicted RBP9.27□□□□□ -0.93
SKA1-203ENST00000417656 NRN1Q9NPD7 142 aa9.27□□□□□ -0.93
SKA1-203ENST00000417656 FBXL17Q9UF56 701 aa9.27□□□□□ -0.93
SKA1-203ENST00000417656 TGP01266 2768 aa9.27□□□□□ -0.93
SKA1-203ENST00000417656 COX7A2P2O60397 106 aa9.26□□□□□ -0.93
SKA1-203ENST00000417656 ZNF688P0C7X2 276 aa9.26□□□□□ -0.93
SKA1-203ENST00000417656 AP2S1P53680 142 aaPredicted RBP9.26□□□□□ -0.93
SKA1-203ENST00000417656 DEFB131AP59861 70 aa9.26□□□□□ -0.93
SKA1-203ENST00000417656 LINC00322Q6ZN03 302 aaPredicted RBP9.26□□□□□ -0.93
SKA1-203ENST00000417656 OR2T35Q8NGX2 323 aa9.26□□□□□ -0.93
SKA1-203ENST00000417656 ATP5SQ99766 215 aa9.26□□□□□ -0.93
SKA1-203ENST00000417656 FAM110AQ9BQ89 295 aa9.26□□□□□ -0.93
SKA1-203ENST00000417656 NPCDR1Q9BY65 106 aa9.26□□□□□ -0.93
SKA1-203ENST00000417656 ARV1Q9H2C2 271 aa9.26□□□□□ -0.93
SKA1-203ENST00000417656 PXMP4Q9Y6I8 212 aa9.26□□□□□ -0.93
SKA1-203ENST00000417656 MPDU1O75352 247 aa9.25□□□□□ -0.93
SKA1-203ENST00000417656 S100A7P31151 101 aa9.25□□□□□ -0.93
SKA1-203ENST00000417656 B2MP61769 119 aa9.25□□□□□ -0.93
SKA1-203ENST00000417656 FGL1Q08830 312 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms