RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 A8MWP6 167 aa6.47□□□□□ -1.37
TRIM48-201ENST00000417545 K7EMT4 169 aa6.47□□□□□ -1.37
TRIM48-201ENST00000417545 FOLR2P14207 255 aa6.47□□□□□ -1.37
TRIM48-201ENST00000417545 CXCL2P19875 107 aa6.47□□□□□ -1.37
TRIM48-201ENST00000417545 RPL29P47914 159 aaKnown RBP6.47□□□□□ -1.37
TRIM48-201ENST00000417545 NKX2-5P52952 324 aaPredicted RBP6.47□□□□□ -1.37
TRIM48-201ENST00000417545 RPL11P62913 178 aaKnown RBP6.47□□□□□ -1.37
TRIM48-201ENST00000417545 ACOT6Q3I5F7 207 aaPredicted RBP6.47□□□□□ -1.37
TRIM48-201ENST00000417545 TM4SF20Q53R12 229 aa6.47□□□□□ -1.37
TRIM48-201ENST00000417545 C10orf113Q5VZT2 155 aa6.47□□□□□ -1.37
TRIM48-201ENST00000417545 LAMTOR1Q6IAA8 161 aa6.47□□□□□ -1.37
TRIM48-201ENST00000417545 EIF5AL1Q6IS14 154 aaKnown RBP6.47□□□□□ -1.37
TRIM48-201ENST00000417545 RBPMS2Q6ZRY4 209 aaKnown RBP6.47□□□□□ -1.37
TRIM48-201ENST00000417545 ZFAND3Q9H8U3 227 aa6.47□□□□□ -1.37
TRIM48-201ENST00000417545 SLC25A22Q9H936 323 aa6.47□□□□□ -1.37
TRIM48-201ENST00000417545 WFDC1Q9HC57 220 aa6.47□□□□□ -1.37
TRIM48-201ENST00000417545 SLC39A9Q9NUM3 307 aa6.47□□□□□ -1.37
TRIM48-201ENST00000417545 MRPL27Q9P0M9 148 aaKnown RBP6.47□□□□□ -1.37
TRIM48-201ENST00000417545 SLC45A2Q9UMX9 530 aa6.47□□□□□ -1.37
TRIM48-201ENST00000417545 LSM4Q9Y4Z0 139 aaKnown RBP6.47□□□□□ -1.37
TRIM48-201ENST00000417545 TIMM9Q9Y5J7 89 aa6.47□□□□□ -1.37
TRIM48-201ENST00000417545 IGHV3OR16-13A0A075B7E8 117 aa6.46□□□□□ -1.38
TRIM48-201ENST00000417545 ELOA3CA0A087WX78 387 aaPredicted RBP6.46□□□□□ -1.38
TRIM48-201ENST00000417545 IGHV3-74A0A0B4J1X5 117 aa6.46□□□□□ -1.38
TRIM48-201ENST00000417545 IGHV3-66A0A0C4DH42 116 aa6.46□□□□□ -1.38
TRIM48-201ENST00000417545 IGHV7-4-1A0A0J9YVY3 117 aa6.46□□□□□ -1.38
TRIM48-201ENST00000417545 WI2-2373I1.2A0A1W2PRP0 233 aa6.46□□□□□ -1.38
TRIM48-201ENST00000417545 ATP6V0CP27449 155 aa6.46□□□□□ -1.38
TRIM48-201ENST00000417545 INSL3P51460 131 aa6.46□□□□□ -1.38
TRIM48-201ENST00000417545 USF2Q15853 346 aaPredicted RBP6.46□□□□□ -1.38
TRIM48-201ENST00000417545 AKR1C8PQ5T2L2 129 aa6.46□□□□□ -1.38
TRIM48-201ENST00000417545 OR2G3Q8NGZ4 309 aa6.46□□□□□ -1.38
TRIM48-201ENST00000417545 RNF2Q99496 336 aa6.46□□□□□ -1.38
TRIM48-201ENST00000417545 A0A1W2PPV4 95 aa6.45□□□□□ -1.38
TRIM48-201ENST00000417545 TMEM213A2RRL7 107 aa6.45□□□□□ -1.38
TRIM48-201ENST00000417545 BOLA2-SMG1P6H3BVE0 249 aa6.45□□□□□ -1.38
TRIM48-201ENST00000417545 MBP02144 154 aa6.45□□□□□ -1.38
TRIM48-201ENST00000417545 IGLL1P15814 213 aa6.45□□□□□ -1.38
TRIM48-201ENST00000417545 CBLN1P23435 193 aa6.45□□□□□ -1.38
TRIM48-201ENST00000417545 LGALSLQ3ZCW2 172 aaPredicted RBP6.45□□□□□ -1.38
TRIM48-201ENST00000417545 LCN12Q6JVE5 192 aa6.45□□□□□ -1.38
TRIM48-201ENST00000417545 TMEM182Q6ZP80 229 aaPredicted RBP6.45□□□□□ -1.38
TRIM48-201ENST00000417545 SLC51BQ86UW2 128 aa6.45□□□□□ -1.38
TRIM48-201ENST00000417545 OR8I2Q8N0Y5 310 aa6.45□□□□□ -1.38
TRIM48-201ENST00000417545 C9orf62Q8N4C0 152 aa6.45□□□□□ -1.38
TRIM48-201ENST00000417545 PSMG3Q9BT73 122 aaPredicted RBP6.45□□□□□ -1.38
TRIM48-201ENST00000417545 RHPN1-AS1Q9BWJ2 59 aa6.45□□□□□ -1.38
TRIM48-201ENST00000417545 ARV1Q9H2C2 271 aa6.45□□□□□ -1.38
TRIM48-201ENST00000417545 SLC25A32Q9H2D1 315 aa6.45□□□□□ -1.38
TRIM48-201ENST00000417545 DNAJC4Q9NNZ3 241 aa6.45□□□□□ -1.38
TRIM48-201ENST00000417545 TECRQ9NZ01 308 aaKnown RBP6.45□□□□□ -1.38
TRIM48-201ENST00000417545 ZMAT5Q9UDW3 170 aaKnown RBP6.45□□□□□ -1.38
TRIM48-201ENST00000417545 IGKV3-7A0A075B6H7 116 aa6.44□□□□□ -1.38
TRIM48-201ENST00000417545 HELTA6NFD8 242 aa6.44□□□□□ -1.38
TRIM48-201ENST00000417545 DNASE2O00115 360 aaPredicted RBP6.44□□□□□ -1.38
TRIM48-201ENST00000417545 CD5P06127 495 aa6.44□□□□□ -1.38
TRIM48-201ENST00000417545 CSN3P07498 182 aa6.44□□□□□ -1.38
TRIM48-201ENST00000417545 ATF4P18848 351 aaPredicted RBP6.44□□□□□ -1.38
TRIM48-201ENST00000417545 CRYBB3P26998 211 aa6.44□□□□□ -1.38
TRIM48-201ENST00000417545 GALR1P47211 349 aa6.44□□□□□ -1.38
TRIM48-201ENST00000417545 TAS2R45P59539 299 aa6.44□□□□□ -1.38
TRIM48-201ENST00000417545 RHOBP62745 196 aa6.44□□□□□ -1.38
TRIM48-201ENST00000417545 PAFAH1B2P68402 229 aa6.44□□□□□ -1.38
TRIM48-201ENST00000417545 SERF2P84101 59 aa6.44□□□□□ -1.38
TRIM48-201ENST00000417545 GUCA2BQ16661 112 aa6.44□□□□□ -1.38
TRIM48-201ENST00000417545 FAM78BQ5VT40 261 aa6.44□□□□□ -1.38
TRIM48-201ENST00000417545 FAM122CQ6P4D5 195 aa6.44□□□□□ -1.38
TRIM48-201ENST00000417545 LINC00305Q7Z4B0 112 aa6.44□□□□□ -1.38
TRIM48-201ENST00000417545 BAP18Q8IXM2 172 aa6.44□□□□□ -1.38
TRIM48-201ENST00000417545 GATAD1Q8WUU5 269 aa6.44□□□□□ -1.38
TRIM48-201ENST00000417545 ST8SIA2Q92186 375 aa6.44□□□□□ -1.38
TRIM48-201ENST00000417545 GPR82Q96P67 336 aa6.44□□□□□ -1.38
TRIM48-201ENST00000417545 UHRF2Q96PU4 802 aa6.44□□□□□ -1.38
TRIM48-201ENST00000417545 MRPL32Q9BYC8 188 aaKnown RBP6.44□□□□□ -1.38
TRIM48-201ENST00000417545 SLC25A39Q9BZJ4 359 aaPredicted RBP6.44□□□□□ -1.38
TRIM48-201ENST00000417545 SMPXQ9UHP9 88 aa6.44□□□□□ -1.38
TRIM48-201ENST00000417545 SELENOKQ9Y6D0 94 aa6.44□□□□□ -1.38
TRIM48-201ENST00000417545 WNK1Q9H4A3 2382 aa6.44□□□□□ -1.38
TRIM48-201ENST00000417545 ZNF785A8K8V0 405 aa6.43□□□□□ -1.38
TRIM48-201ENST00000417545 H3BRN7 92 aa6.43□□□□□ -1.38
TRIM48-201ENST00000417545 CHEK1O14757 476 aa6.43□□□□□ -1.38
TRIM48-201ENST00000417545 RPL7P18124 248 aaKnown RBP6.43□□□□□ -1.38
TRIM48-201ENST00000417545 M6PRP20645 277 aa6.43□□□□□ -1.38
TRIM48-201ENST00000417545 CDC34P49427 236 aaPredicted RBP6.43□□□□□ -1.38
TRIM48-201ENST00000417545 PLP1P60201 277 aa6.43□□□□□ -1.38
TRIM48-201ENST00000417545 TMEM41BQ5BJD5 291 aa6.43□□□□□ -1.38
TRIM48-201ENST00000417545 SIGLEC15Q6ZMC9 328 aa6.43□□□□□ -1.38
TRIM48-201ENST00000417545 TCF24Q7RTU0 167 aa6.43□□□□□ -1.38
TRIM48-201ENST00000417545 IQCF2Q8IXL9 164 aa6.43□□□□□ -1.38
TRIM48-201ENST00000417545 STXBP6Q8NFX7 210 aa6.43□□□□□ -1.38
TRIM48-201ENST00000417545 OR10G4Q8NGN3 311 aa6.43□□□□□ -1.38
TRIM48-201ENST00000417545 OR10G9Q8NGN4 311 aa6.43□□□□□ -1.38
TRIM48-201ENST00000417545 OR10G7Q8NGN6 311 aa6.43□□□□□ -1.38
TRIM48-201ENST00000417545 OR2K2Q8NGT1 345 aa6.43□□□□□ -1.38
TRIM48-201ENST00000417545 LRRC20Q8TCA0 184 aa6.43□□□□□ -1.38
TRIM48-201ENST00000417545 SCRT1Q9BWW7 348 aa6.43□□□□□ -1.38
TRIM48-201ENST00000417545 SH3BGRL3Q9H299 93 aa6.43□□□□□ -1.38
TRIM48-201ENST00000417545 ZNF98A6NK75 572 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 OR7C2O60412 319 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 APOHP02749 345 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms