RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 EXOC3-AS1Q8N2X6 119 aa11.55□□□□□ -0.56
HDAC9-208ENST00000417496 C8orf31Q8N9H6 132 aa11.55□□□□□ -0.56
HDAC9-208ENST00000417496 TMEM116Q8NCL8 245 aa11.55□□□□□ -0.56
HDAC9-208ENST00000417496 PGLYRP4Q96LB8 373 aa11.55□□□□□ -0.56
HDAC9-208ENST00000417496 Q9H3A6 140 aa11.55□□□□□ -0.56
HDAC9-208ENST00000417496 PSG1P11464 419 aa11.54□□□□□ -0.56
HDAC9-208ENST00000417496 Q56UQ5 140 aa11.54□□□□□ -0.56
HDAC9-208ENST00000417496 MLST8Q9BVC4 326 aa11.54□□□□□ -0.56
HDAC9-208ENST00000417496 JKAMPQ9P055 326 aa11.54□□□□□ -0.56
HDAC9-208ENST00000417496 KAAG1Q9UBP8 84 aa11.54□□□□□ -0.56
HDAC9-208ENST00000417496 IGHV1-3A0A0C4DH29 117 aa11.54□□□□□ -0.56
HDAC9-208ENST00000417496 M0QZK8 103 aa11.54□□□□□ -0.56
HDAC9-208ENST00000417496 M0R2Z0 102 aa11.54□□□□□ -0.56
HDAC9-208ENST00000417496 NPSP0C0P6 89 aa11.54□□□□□ -0.56
HDAC9-208ENST00000417496 ETFRF1Q6IPR1 90 aa11.54□□□□□ -0.56
HDAC9-208ENST00000417496 PPP1R27Q86WC6 154 aa11.54□□□□□ -0.56
HDAC9-208ENST00000417496 TRGV9Q99603 122 aa11.54□□□□□ -0.56
HDAC9-208ENST00000417496 LPAR2Q9HBW0 351 aa11.54□□□□□ -0.56
HDAC9-208ENST00000417496 KLF12Q9Y4X4 402 aa11.54□□□□□ -0.56
HDAC9-208ENST00000417496 MED13LQ71F56 2210 aa11.54□□□□□ -0.56
HDAC9-208ENST00000417496 IGLV1-47P01700 117 aa11.53□□□□□ -0.56
HDAC9-208ENST00000417496 CIARTQ8N365 385 aaPredicted RBP11.53□□□□□ -0.56
HDAC9-208ENST00000417496 TEX45Q8NA69 505 aa11.53□□□□□ -0.56
HDAC9-208ENST00000417496 URB1-AS1Q96HZ7 61 aa11.53□□□□□ -0.56
HDAC9-208ENST00000417496 CLEC5AQ9NY25 188 aa11.53□□□□□ -0.56
HDAC9-208ENST00000417496 ANKHD1Q8IWZ3 2542 aaKnown RBP11.53□□□□□ -0.56
HDAC9-208ENST00000417496 FAM181BA6NEQ2 426 aa11.53□□□□□ -0.56
HDAC9-208ENST00000417496 VSTM5A8MXK1 200 aa11.53□□□□□ -0.56
HDAC9-208ENST00000417496 TEX22C9J3V5 150 aa11.53□□□□□ -0.56
HDAC9-208ENST00000417496 BUB1B-PAK6H3BSN5 160 aa11.53□□□□□ -0.56
HDAC9-208ENST00000417496 LY6HO94772 140 aa11.53□□□□□ -0.56
HDAC9-208ENST00000417496 TCRAP04437 139 aa11.53□□□□□ -0.56
HDAC9-208ENST00000417496 CRYGBP07316 175 aa11.53□□□□□ -0.56
HDAC9-208ENST00000417496 IGLC2P0DOY2 106 aa11.53□□□□□ -0.56
HDAC9-208ENST00000417496 IGLC3P0DOY3 106 aa11.53□□□□□ -0.56
HDAC9-208ENST00000417496 TCF15Q12870 199 aa11.53□□□□□ -0.56
HDAC9-208ENST00000417496 Q6ZN92 141 aa11.53□□□□□ -0.56
HDAC9-208ENST00000417496 SPATA12Q7Z6I5 190 aa11.53□□□□□ -0.56
HDAC9-208ENST00000417496 STXBP6Q8NFX7 210 aa11.53□□□□□ -0.56
HDAC9-208ENST00000417496 C8orf46Q8TAG6 207 aa11.53□□□□□ -0.56
HDAC9-208ENST00000417496 C22orf15Q8WYQ4 148 aa11.53□□□□□ -0.56
HDAC9-208ENST00000417496 TXN2Q99757 166 aa11.53□□□□□ -0.56
HDAC9-208ENST00000417496 RALYQ9UKM9 306 aaKnown RBP11.53□□□□□ -0.56
HDAC9-208ENST00000417496 S4R3C0 116 aa11.53□□□□□ -0.56
HDAC9-208ENST00000417496 RBP4P02753 201 aa11.52□□□□□ -0.56
HDAC9-208ENST00000417496 SSX8Q7RTT4 187 aa11.52□□□□□ -0.56
HDAC9-208ENST00000417496 LINC01560Q8TB33 94 aa11.52□□□□□ -0.56
HDAC9-208ENST00000417496 C17orf77Q96MU5 243 aa11.52□□□□□ -0.56
HDAC9-208ENST00000417496 RPP21Q9H633 154 aaKnown RBP11.52□□□□□ -0.56
HDAC9-208ENST00000417496 MRPL27Q9P0M9 148 aaKnown RBP11.52□□□□□ -0.56
HDAC9-208ENST00000417496 A0A1B0GXF2 115 aa11.52□□□□□ -0.57
HDAC9-208ENST00000417496 P01737 135 aa11.52□□□□□ -0.57
HDAC9-208ENST00000417496 LDLRAD2Q5SZI1 272 aa11.52□□□□□ -0.57
HDAC9-208ENST00000417496 RASL11AQ6T310 242 aa11.52□□□□□ -0.57
HDAC9-208ENST00000417496 TP73-AS1Q9UF72 201 aa11.52□□□□□ -0.57
HDAC9-208ENST00000417496 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.51□□□□□ -0.57
HDAC9-208ENST00000417496 LTAP01374 205 aa11.51□□□□□ -0.57
HDAC9-208ENST00000417496 PLGLAQ15195 96 aa11.51□□□□□ -0.57
HDAC9-208ENST00000417496 C5orf17Q8NAS9 161 aa11.51□□□□□ -0.57
HDAC9-208ENST00000417496 SRSF12Q8WXF0 261 aaKnown RBP11.51□□□□□ -0.57
HDAC9-208ENST00000417496 PRSS22Q9GZN4 317 aa11.51□□□□□ -0.57
HDAC9-208ENST00000417496 F11RQ9Y624 299 aaKnown RBP11.51□□□□□ -0.57
HDAC9-208ENST00000417496 TOMM40O96008 361 aa11.51□□□□□ -0.57
HDAC9-208ENST00000417496 IGLC1P0CG04 106 aa11.51□□□□□ -0.57
HDAC9-208ENST00000417496 GRNP28799 593 aaKnown RBP11.51□□□□□ -0.57
HDAC9-208ENST00000417496 ZNF138P52744 262 aa11.51□□□□□ -0.57
HDAC9-208ENST00000417496 HBBP68871 147 aa11.51□□□□□ -0.57
HDAC9-208ENST00000417496 PVRIGQ6DKI7 326 aa11.51□□□□□ -0.57
HDAC9-208ENST00000417496 GOLT1AQ6ZVE7 132 aa11.51□□□□□ -0.57
HDAC9-208ENST00000417496 PRNTQ86SH4 94 aa11.51□□□□□ -0.57
HDAC9-208ENST00000417496 STPG4Q8N801 248 aa11.51□□□□□ -0.57
HDAC9-208ENST00000417496 HIGD1AQ9Y241 93 aa11.51□□□□□ -0.57
HDAC9-208ENST00000417496 KLF17Q5JT82 389 aaPredicted RBP11.5□□□□□ -0.57
HDAC9-208ENST00000417496 LINC00173Q6ZV60 143 aa11.5□□□□□ -0.57
HDAC9-208ENST00000417496 RPEQ96AT9 228 aa11.5□□□□□ -0.57
HDAC9-208ENST00000417496 SLC25A39Q9BZJ4 359 aaPredicted RBP11.5□□□□□ -0.57
HDAC9-208ENST00000417496 ATRXP46100 2492 aa11.5□□□□□ -0.57
HDAC9-208ENST00000417496 PPIAL4CA0A0B4J2A2 164 aa11.5□□□□□ -0.57
HDAC9-208ENST00000417496 C19orf71A6NCJ1 209 aa11.5□□□□□ -0.57
HDAC9-208ENST00000417496 DLEU1O43261 78 aa11.5□□□□□ -0.57
HDAC9-208ENST00000417496 OR2J3O76001 311 aa11.5□□□□□ -0.57
HDAC9-208ENST00000417496 PPIAL4GP0DN37 164 aa11.5□□□□□ -0.57
HDAC9-208ENST00000417496 APOBEC3AP31941 199 aaPredicted RBP11.5□□□□□ -0.57
HDAC9-208ENST00000417496 KLF5Q13887 457 aaPredicted RBP11.5□□□□□ -0.57
HDAC9-208ENST00000417496 DAZAP1Q96EP5 407 aaKnown RBP11.5□□□□□ -0.57
HDAC9-208ENST00000417496 OR8B2Q96RD0 313 aa11.5□□□□□ -0.57
HDAC9-208ENST00000417496 UQCR10Q9UDW1 63 aa11.5□□□□□ -0.57
HDAC9-208ENST00000417496 C2orf70A6NJV1 201 aa11.49□□□□□ -0.57
HDAC9-208ENST00000417496 CA7P43166 264 aa11.49□□□□□ -0.57
HDAC9-208ENST00000417496 Q6ZVH6 145 aa11.49□□□□□ -0.57
HDAC9-208ENST00000417496 FMC1Q96HJ9 113 aa11.49□□□□□ -0.57
HDAC9-208ENST00000417496 CHRDL1Q9BU40 450 aa11.49□□□□□ -0.57
HDAC9-208ENST00000417496 PTPRQQ9UMZ3 2332 aa11.49□□□□□ -0.57
HDAC9-208ENST00000417496 A8MWL6 223 aa11.49□□□□□ -0.57
HDAC9-208ENST00000417496 CNIH1O95406 144 aa11.49□□□□□ -0.57
HDAC9-208ENST00000417496 IGKV1-17P01599 117 aa11.49□□□□□ -0.57
HDAC9-208ENST00000417496 COL8A1P27658 744 aa11.49□□□□□ -0.57
HDAC9-208ENST00000417496 HNRNPA3P51991 378 aaKnown RBP11.49□□□□□ -0.57
HDAC9-208ENST00000417496 BCL6BQ8N143 479 aaPredicted RBP11.49□□□□□ -0.57
HDAC9-208ENST00000417496 RASL11BQ9BPW5 248 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms