RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 C1orf194Q5T5A4 169 aa17.27■□□□□ 0.36
SMARCB1-205ENST00000417137 ZNF546Q86UE3 836 aa17.27■□□□□ 0.36
SMARCB1-205ENST00000417137 GBGT1Q8N5D6 347 aa17.27■□□□□ 0.36
SMARCB1-205ENST00000417137 MS4A6AQ9H2W1 248 aa17.27■□□□□ 0.36
SMARCB1-205ENST00000417137 FBXL17Q9UF56 701 aa17.27■□□□□ 0.36
SMARCB1-205ENST00000417137 AGPAT2O15120 278 aa17.26■□□□□ 0.35
SMARCB1-205ENST00000417137 FRMD6-AS1P0C7T7 363 aa17.26■□□□□ 0.35
SMARCB1-205ENST00000417137 FGL1Q08830 312 aa17.26■□□□□ 0.35
SMARCB1-205ENST00000417137 TMEM182Q6ZP80 229 aaPredicted RBP17.26■□□□□ 0.35
SMARCB1-205ENST00000417137 OR1B1Q8NGR6 318 aa17.26■□□□□ 0.35
SMARCB1-205ENST00000417137 GLMPQ8WWB7 406 aa17.26■□□□□ 0.35
SMARCB1-205ENST00000417137 FAM110AQ9BQ89 295 aa17.26■□□□□ 0.35
SMARCB1-205ENST00000417137 C19orf73Q9NVV2 129 aa17.26■□□□□ 0.35
SMARCB1-205ENST00000417137 HYPMO75409 117 aa17.25■□□□□ 0.35
SMARCB1-205ENST00000417137 LINC00869P0C866 280 aa17.25■□□□□ 0.35
SMARCB1-205ENST00000417137 PLP1P60201 277 aa17.25■□□□□ 0.35
SMARCB1-205ENST00000417137 RAP2BP61225 183 aa17.25■□□□□ 0.35
SMARCB1-205ENST00000417137 PXDC1Q5TGL8 231 aa17.25■□□□□ 0.35
SMARCB1-205ENST00000417137 WFDC3Q8IUB2 231 aa17.25■□□□□ 0.35
SMARCB1-205ENST00000417137 DEFB125Q8N687 156 aa17.25■□□□□ 0.35
SMARCB1-205ENST00000417137 STXBP6Q8NFX7 210 aa17.25■□□□□ 0.35
SMARCB1-205ENST00000417137 OR5C1Q8NGR4 320 aa17.25■□□□□ 0.35
SMARCB1-205ENST00000417137 MBD2Q9UBB5 411 aa17.25■□□□□ 0.35
SMARCB1-205ENST00000417137 WDR83OSQ9Y284 106 aa17.25■□□□□ 0.35
SMARCB1-205ENST00000417137 GIPP09681 153 aaPredicted RBP17.24■□□□□ 0.35
SMARCB1-205ENST00000417137 CAMLGP49069 296 aa17.24■□□□□ 0.35
SMARCB1-205ENST00000417137 SIGLEC15Q6ZMC9 328 aa17.24■□□□□ 0.35
SMARCB1-205ENST00000417137 UBE2L5PA0A1B0GUS4 154 aa17.23■□□□□ 0.35
SMARCB1-205ENST00000417137 MPDU1O75352 247 aa17.23■□□□□ 0.35
SMARCB1-205ENST00000417137 NHLRC4P0CG21 123 aaPredicted RBP17.23■□□□□ 0.35
SMARCB1-205ENST00000417137 LYL1P12980 280 aa17.23■□□□□ 0.35
SMARCB1-205ENST00000417137 RPL12P30050 165 aaKnown RBP17.23■□□□□ 0.35
SMARCB1-205ENST00000417137 OR8I2Q8N0Y5 310 aa17.23■□□□□ 0.35
SMARCB1-205ENST00000417137 MGST2Q99735 147 aa17.23■□□□□ 0.35
SMARCB1-205ENST00000417137 SRD5A3Q9H8P0 318 aa17.23■□□□□ 0.35
SMARCB1-205ENST00000417137 RNF24Q9Y225 148 aa17.23■□□□□ 0.35
SMARCB1-205ENST00000417137 HIGD1AQ9Y241 93 aa17.23■□□□□ 0.35
SMARCB1-205ENST00000417137 OR5G3P0C626 314 aa17.22■□□□□ 0.35
SMARCB1-205ENST00000417137 Q6ZRG5 221 aa17.22■□□□□ 0.35
SMARCB1-205ENST00000417137 ARL6Q9H0F7 186 aa17.22■□□□□ 0.35
SMARCB1-205ENST00000417137 DOK5Q9P104 306 aa17.22■□□□□ 0.35
SMARCB1-205ENST00000417137 UBQLN2Q9UHD9 624 aa17.22■□□□□ 0.35
SMARCB1-205ENST00000417137 STPG3Q8N7X2 389 aa17.21■□□□□ 0.35
SMARCB1-205ENST00000417137 CHAC2Q8WUX2 184 aa17.21■□□□□ 0.35
SMARCB1-205ENST00000417137 WFDC10AQ9H1F0 79 aa17.21■□□□□ 0.35
SMARCB1-205ENST00000417137 HSPB11Q9Y547 144 aa17.21■□□□□ 0.35
SMARCB1-205ENST00000417137 ZNF98A6NK75 572 aa17.2■□□□□ 0.34
SMARCB1-205ENST00000417137 FGF7P21781 194 aa17.2■□□□□ 0.34
SMARCB1-205ENST00000417137 CLINT1Q14677 625 aa17.2■□□□□ 0.34
SMARCB1-205ENST00000417137 ODF3L2Q3SX64 289 aa17.2■□□□□ 0.34
SMARCB1-205ENST00000417137 GPR82Q96P67 336 aa17.2■□□□□ 0.34
SMARCB1-205ENST00000417137 ASCL2Q99929 193 aa17.2■□□□□ 0.34
SMARCB1-205ENST00000417137 NRN1Q9NPD7 142 aa17.2■□□□□ 0.34
SMARCB1-205ENST00000417137 ELOA3CA0A087WX78 387 aaPredicted RBP17.19■□□□□ 0.34
SMARCB1-205ENST00000417137 K7EQG2 157 aa17.19■□□□□ 0.34
SMARCB1-205ENST00000417137 RPL29P47914 159 aaKnown RBP17.19■□□□□ 0.34
SMARCB1-205ENST00000417137 GGTLC1Q9BX51 225 aa17.19■□□□□ 0.34
SMARCB1-205ENST00000417137 SLC25A39Q9BZJ4 359 aaPredicted RBP17.19■□□□□ 0.34
SMARCB1-205ENST00000417137 SLC25A22Q9H936 323 aa17.19■□□□□ 0.34
SMARCB1-205ENST00000417137 GALR1P47211 349 aa17.18■□□□□ 0.34
SMARCB1-205ENST00000417137 SBSPONQ8IVN8 264 aa17.18■□□□□ 0.34
SMARCB1-205ENST00000417137 DCANP1Q8TF63 244 aa17.18■□□□□ 0.34
SMARCB1-205ENST00000417137 ATP5SQ99766 215 aa17.18■□□□□ 0.34
SMARCB1-205ENST00000417137 SHANK2-AS3Q9BTD1 123 aa17.18■□□□□ 0.34
SMARCB1-205ENST00000417137 ARV1Q9H2C2 271 aa17.18■□□□□ 0.34
SMARCB1-205ENST00000417137 H3BRN7 92 aa17.17■□□□□ 0.34
SMARCB1-205ENST00000417137 COX7A2P2O60397 106 aa17.17■□□□□ 0.34
SMARCB1-205ENST00000417137 ZNF709Q8N972 641 aa17.17■□□□□ 0.34
SMARCB1-205ENST00000417137 OR1L4Q8NGR5 311 aa17.17■□□□□ 0.34
SMARCB1-205ENST00000417137 MAP6D1Q9H9H5 199 aa17.17■□□□□ 0.34
SMARCB1-205ENST00000417137 SEPSECSQ9HD40 501 aaKnown RBP17.17■□□□□ 0.34
SMARCB1-205ENST00000417137 DNAJC4Q9NNZ3 241 aa17.17■□□□□ 0.34
SMARCB1-205ENST00000417137 LOC102724200A0A096LPH7 203 aaPredicted RBP17.16■□□□□ 0.34
SMARCB1-205ENST00000417137 IFNA5P01569 189 aa17.16■□□□□ 0.34
SMARCB1-205ENST00000417137 B2MP61769 119 aa17.16■□□□□ 0.34
SMARCB1-205ENST00000417137 SNRPD3P62318 126 aaKnown RBP17.16■□□□□ 0.34
SMARCB1-205ENST00000417137 PRR20EP86478 221 aa17.16■□□□□ 0.34
SMARCB1-205ENST00000417137 PRR20CP86479 221 aa17.16■□□□□ 0.34
SMARCB1-205ENST00000417137 PRR20DP86480 221 aa17.16■□□□□ 0.34
SMARCB1-205ENST00000417137 PRR20BP86481 221 aa17.16■□□□□ 0.34
SMARCB1-205ENST00000417137 PRR20AP86496 221 aa17.16■□□□□ 0.34
SMARCB1-205ENST00000417137 OPCMLQ14982 345 aa17.16■□□□□ 0.34
SMARCB1-205ENST00000417137 SAMD13Q5VXD3 122 aa17.16■□□□□ 0.34
SMARCB1-205ENST00000417137 MIC13Q5XKP0 118 aa17.16■□□□□ 0.34
SMARCB1-205ENST00000417137 LINC00322Q6ZN03 302 aaPredicted RBP17.16■□□□□ 0.34
SMARCB1-205ENST00000417137 OR2T35Q8NGX2 323 aa17.16■□□□□ 0.34
SMARCB1-205ENST00000417137 NPCDR1Q9BY65 106 aa17.16■□□□□ 0.34
SMARCB1-205ENST00000417137 KCNIP2Q9NS61 270 aa17.16■□□□□ 0.34
SMARCB1-205ENST00000417137 SLC39A9Q9NUM3 307 aa17.16■□□□□ 0.34
SMARCB1-205ENST00000417137 RBMY1BA6NDE4 496 aaKnown RBP17.15■□□□□ 0.34
SMARCB1-205ENST00000417137 RBMY1EA6NEQ0 496 aaKnown RBP17.15■□□□□ 0.34
SMARCB1-205ENST00000417137 RBMY1DP0C7P1 496 aaKnown RBP17.15■□□□□ 0.34
SMARCB1-205ENST00000417137 RPL7P18124 248 aaKnown RBP17.15■□□□□ 0.34
SMARCB1-205ENST00000417137 DEFB131AP59861 70 aa17.15■□□□□ 0.34
SMARCB1-205ENST00000417137 HAGHQ16775 308 aa17.15■□□□□ 0.34
SMARCB1-205ENST00000417137 C10orf113Q5VZT2 155 aa17.15■□□□□ 0.34
SMARCB1-205ENST00000417137 PATE2Q6UY27 113 aa17.15■□□□□ 0.34
SMARCB1-205ENST00000417137 APRG1Q8IVJ8 170 aa17.15■□□□□ 0.34
SMARCB1-205ENST00000417137 SCGB1C1Q8TD33 95 aa17.15■□□□□ 0.34
SMARCB1-205ENST00000417137 PFDN5Q99471 154 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms