RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 C9orf170A2RU37 121 aa10.89□□□□□ -0.67
UBXN4-203ENST00000416538 SYNGR2O43760 224 aa10.89□□□□□ -0.67
UBXN4-203ENST00000416538 NDUFB6O95139 128 aa10.89□□□□□ -0.67
UBXN4-203ENST00000416538 MIFP14174 115 aa10.89□□□□□ -0.67
UBXN4-203ENST00000416538 GATA2P23769 480 aaPredicted RBP10.89□□□□□ -0.67
UBXN4-203ENST00000416538 TMEM41BQ5BJD5 291 aa10.89□□□□□ -0.67
UBXN4-203ENST00000416538 SPANXN2Q5MJ10 180 aa10.89□□□□□ -0.67
UBXN4-203ENST00000416538 Q6ZTC4 211 aa10.89□□□□□ -0.67
UBXN4-203ENST00000416538 ACOT7LQ6ZUV0 252 aa10.89□□□□□ -0.67
UBXN4-203ENST00000416538 HRH4Q9H3N8 390 aa10.89□□□□□ -0.67
UBXN4-203ENST00000416538 SEPSECSQ9HD40 501 aaKnown RBP10.89□□□□□ -0.67
UBXN4-203ENST00000416538 TBC1D24Q9ULP9 559 aa10.89□□□□□ -0.67
UBXN4-203ENST00000416538 CCNKO75909 580 aa10.88□□□□□ -0.67
UBXN4-203ENST00000416538 HLA-DMBP28068 263 aa10.88□□□□□ -0.67
UBXN4-203ENST00000416538 NKX2-1P43699 371 aaPredicted RBP10.88□□□□□ -0.67
UBXN4-203ENST00000416538 SNRPD3P62318 126 aaKnown RBP10.88□□□□□ -0.67
UBXN4-203ENST00000416538 LGALS9CQ6DKI2 356 aa10.88□□□□□ -0.67
UBXN4-203ENST00000416538 C20orf173Q96LM9 149 aa10.88□□□□□ -0.67
UBXN4-203ENST00000416538 SCRT1Q9BWW7 348 aa10.88□□□□□ -0.67
UBXN4-203ENST00000416538 SLC25A32Q9H2D1 315 aa10.88□□□□□ -0.67
UBXN4-203ENST00000416538 LINC00854A0A1B0GVQ3 168 aa10.87□□□□□ -0.67
UBXN4-203ENST00000416538 PMS2P5A8MQ11 134 aa10.87□□□□□ -0.67
UBXN4-203ENST00000416538 F6UB75 175 aa10.87□□□□□ -0.67
UBXN4-203ENST00000416538 MED6O75586 246 aa10.87□□□□□ -0.67
UBXN4-203ENST00000416538 IGKV3-20P01619 116 aa10.87□□□□□ -0.67
UBXN4-203ENST00000416538 ANXA7P20073 488 aaKnown RBP10.87□□□□□ -0.67
UBXN4-203ENST00000416538 FXYD7P58549 80 aa10.87□□□□□ -0.67
UBXN4-203ENST00000416538 UBE2MP61081 183 aaKnown RBP10.87□□□□□ -0.67
UBXN4-203ENST00000416538 POLR2GP62487 172 aaKnown RBP eCLIP10.87□□□□□ -0.67
UBXN4-203ENST00000416538 RAB11AP62491 216 aa10.87□□□□□ -0.67
UBXN4-203ENST00000416538 SPANXN5Q5MJ07 72 aa10.87□□□□□ -0.67
UBXN4-203ENST00000416538 ZNF767PQ75MW2 155 aa10.87□□□□□ -0.67
UBXN4-203ENST00000416538 ZNF709Q8N972 641 aa10.87□□□□□ -0.67
UBXN4-203ENST00000416538 OR4D5Q8NGN0 318 aa10.87□□□□□ -0.67
UBXN4-203ENST00000416538 SAV1Q9H4B6 383 aaPredicted RBP10.87□□□□□ -0.67
UBXN4-203ENST00000416538 APLNQ9ULZ1 77 aa10.87□□□□□ -0.67
UBXN4-203ENST00000416538 SNRPGP15A8MWD9 76 aa10.86□□□□□ -0.67
UBXN4-203ENST00000416538 NUP62P37198 522 aaPredicted RBP10.86□□□□□ -0.67
UBXN4-203ENST00000416538 INPP1P49441 399 aa10.86□□□□□ -0.67
UBXN4-203ENST00000416538 PSMB3P49720 205 aa10.86□□□□□ -0.67
UBXN4-203ENST00000416538 ID3Q02535 119 aa10.86□□□□□ -0.67
UBXN4-203ENST00000416538 C1orf194Q5T5A4 169 aa10.86□□□□□ -0.67
UBXN4-203ENST00000416538 TRIQKQ629K1 86 aa10.86□□□□□ -0.67
UBXN4-203ENST00000416538 C2CD4CQ8TF44 421 aa10.86□□□□□ -0.67
UBXN4-203ENST00000416538 LINC00052Q96N35 136 aa10.86□□□□□ -0.67
UBXN4-203ENST00000416538 CIB3Q96Q77 187 aaPredicted RBP10.86□□□□□ -0.67
UBXN4-203ENST00000416538 OR4E1P0C645 316 aa10.85□□□□□ -0.67
UBXN4-203ENST00000416538 PAX9P55771 341 aa10.85□□□□□ -0.67
UBXN4-203ENST00000416538 ZNF705AQ6ZN79 300 aaPredicted RBP10.85□□□□□ -0.67
UBXN4-203ENST00000416538 SLC35B3Q9H1N7 401 aa10.85□□□□□ -0.67
UBXN4-203ENST00000416538 NAP1L6A6NFF2 107 aa10.84□□□□□ -0.67
UBXN4-203ENST00000416538 ZNF705FA8MVS1 300 aaPredicted RBP10.84□□□□□ -0.67
UBXN4-203ENST00000416538 IGLL5B9A064 214 aa10.84□□□□□ -0.67
UBXN4-203ENST00000416538 SSSCA1O60232 199 aa10.84□□□□□ -0.67
UBXN4-203ENST00000416538 ZNF705DP0CH99 300 aaPredicted RBP10.84□□□□□ -0.67
UBXN4-203ENST00000416538 ZNF705BP0CI00 300 aaPredicted RBP10.84□□□□□ -0.67
UBXN4-203ENST00000416538 IL7P13232 177 aa10.84□□□□□ -0.67
UBXN4-203ENST00000416538 AKR1C1Q04828 323 aa10.84□□□□□ -0.67
UBXN4-203ENST00000416538 C12orf74Q32Q52 190 aa10.84□□□□□ -0.67
UBXN4-203ENST00000416538 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.84□□□□□ -0.67
UBXN4-203ENST00000416538 FOXI2Q6ZQN5 318 aa10.84□□□□□ -0.67
UBXN4-203ENST00000416538 OR8I2Q8N0Y5 310 aa10.84□□□□□ -0.67
UBXN4-203ENST00000416538 PPP1R14BQ96C90 147 aa10.84□□□□□ -0.67
UBXN4-203ENST00000416538 SLC25A22Q9H936 323 aa10.84□□□□□ -0.67
UBXN4-203ENST00000416538 RCL1Q9Y2P8 373 aaKnown RBP10.84□□□□□ -0.67
UBXN4-203ENST00000416538 ZNF98A6NK75 572 aa10.83□□□□□ -0.68
UBXN4-203ENST00000416538 FABP1P07148 127 aa10.83□□□□□ -0.68
UBXN4-203ENST00000416538 C1QTNF4Q9BXJ3 329 aa10.83□□□□□ -0.68
UBXN4-203ENST00000416538 DOK5Q9P104 306 aa10.83□□□□□ -0.68
UBXN4-203ENST00000416538 STRAPQ9Y3F4 350 aaKnown RBP10.83□□□□□ -0.68
UBXN4-203ENST00000416538 TRAV8-2A0A0B4J237 113 aa10.82□□□□□ -0.68
UBXN4-203ENST00000416538 A0A0J9YX75 114 aa10.82□□□□□ -0.68
UBXN4-203ENST00000416538 A8MTW9 85 aa10.82□□□□□ -0.68
UBXN4-203ENST00000416538 C11orf94C9JXX5 98 aa10.82□□□□□ -0.68
UBXN4-203ENST00000416538 H3BRN7 92 aa10.82□□□□□ -0.68
UBXN4-203ENST00000416538 ISLRO14498 428 aa10.82□□□□□ -0.68
UBXN4-203ENST00000416538 PLA2G10O15496 165 aa10.82□□□□□ -0.68
UBXN4-203ENST00000416538 ORM2P19652 201 aa10.82□□□□□ -0.68
UBXN4-203ENST00000416538 FAM78BQ5VT40 261 aa10.82□□□□□ -0.68
UBXN4-203ENST00000416538 IGFL4Q6B9Z1 124 aa10.82□□□□□ -0.68
UBXN4-203ENST00000416538 AMTNQ6UX39 209 aa10.82□□□□□ -0.68
UBXN4-203ENST00000416538 TMEM14EPQ6UXP3 125 aa10.82□□□□□ -0.68
UBXN4-203ENST00000416538 TMEM144Q7Z5S9 345 aa10.82□□□□□ -0.68
UBXN4-203ENST00000416538 COQ8AQ8NI60 647 aa10.82□□□□□ -0.68
UBXN4-203ENST00000416538 PSENENQ9NZ42 101 aa10.82□□□□□ -0.68
UBXN4-203ENST00000416538 NDUFA13Q9P0J0 144 aa10.82□□□□□ -0.68
UBXN4-203ENST00000416538 IGHV4-4A0A075B6R2 117 aa10.81□□□□□ -0.68
UBXN4-203ENST00000416538 TRAV10A0A0B4J240 114 aa10.81□□□□□ -0.68
UBXN4-203ENST00000416538 ID1P41134 155 aa10.81□□□□□ -0.68
UBXN4-203ENST00000416538 NUTF2P61970 127 aaKnown RBP10.81□□□□□ -0.68
UBXN4-203ENST00000416538 RRAS2P62070 204 aaPredicted RBP10.81□□□□□ -0.68
UBXN4-203ENST00000416538 ARL16Q0P5N6 197 aa10.81□□□□□ -0.68
UBXN4-203ENST00000416538 CYP2G1PQ6ZSU1 146 aa10.81□□□□□ -0.68
UBXN4-203ENST00000416538 C1orf158Q8N1D5 194 aa10.81□□□□□ -0.68
UBXN4-203ENST00000416538 BPIFCQ8NFQ6 507 aa10.81□□□□□ -0.68
UBXN4-203ENST00000416538 OR4B1Q8NGF8 309 aa10.81□□□□□ -0.68
UBXN4-203ENST00000416538 OR1B1Q8NGR6 318 aa10.81□□□□□ -0.68
UBXN4-203ENST00000416538 CLUHP3Q96NS8 147 aa10.81□□□□□ -0.68
UBXN4-203ENST00000416538 RSG1Q9BU20 258 aa10.81□□□□□ -0.68
UBXN4-203ENST00000416538 PFDN2Q9UHV9 154 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms