RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 GYPAP02724 150 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 CST2P09228 141 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 COX5BP10606 129 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 SLC2A1P11166 492 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 COX7A1P24310 79 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 GNRHRP30968 328 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 CEACAM3P40198 252 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 GUCA1AP43080 201 aaPredicted RBP4.39□□□□□ -1.71
EPHA4-204ENST00000415749 CBX5P45973 191 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 CDC34P49427 236 aaPredicted RBP4.39□□□□□ -1.71
EPHA4-204ENST00000415749 TAS2R31P59538 309 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 KLRD1Q13241 179 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 ARFRP1Q13795 201 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 KIAA0087Q14695 138 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 OR8B8Q15620 311 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 KISS1Q15726 138 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 TCTEX1D4Q5JR98 221 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 ZNF343Q6P1L6 599 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 TMED4Q7Z7H5 227 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 STPG2Q8N412 459 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 Q8N7P7 452 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 CHST4Q8NCG5 386 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 LY6G5BQ8NDX9 201 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 OR51G1Q8NGK1 321 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 OR5L1Q8NGL2 311 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 OR1N2Q8NGR9 330 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 OR4K15Q8NH41 348 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 COQ8AQ8NI60 647 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 PIFOQ8TCI5 191 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 PPP1R1CQ8WVI7 109 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 IL22RA2Q969J5 263 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 ARHGAP5-AS1Q96IT6 56 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 ADTRPQ96IZ2 230 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 SPACA5Q96QH8 159 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 TSNAXQ99598 290 aaKnown RBP4.39□□□□□ -1.71
EPHA4-204ENST00000415749 PHB2Q99623 299 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 PECRQ9BY49 303 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 CHST5Q9GZS9 411 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 IFT46Q9NQC8 304 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 MOB4Q9Y3A3 225 aa4.39□□□□□ -1.71
EPHA4-204ENST00000415749 NOP16Q9Y3C1 178 aaKnown RBP4.39□□□□□ -1.71
EPHA4-204ENST00000415749 HUWE1Q7Z6Z7 4374 aaKnown RBP4.39□□□□□ -1.71
EPHA4-204ENST00000415749 TMEM213A2RRL7 107 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 LHBP01229 141 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 PMP2P02689 132 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 CSN2P05814 226 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 PGA5P0DJD9 388 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 OR5H8P0DN80 308 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 F2RP25116 425 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 PAX6P26367 422 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 OR2B8PP59922 312 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 SURF2Q15527 256 aaPredicted RBP4.38□□□□□ -1.71
EPHA4-204ENST00000415749 SCGB2B2Q4G0G5 96 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 SMUG1Q53HV7 270 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 TMEM128Q5BJH2 165 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 C10orf91Q5T1B1 145 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 FBXW12Q6X9E4 464 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 TMEM61Q8N0U2 210 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 NECAP1Q8NC96 275 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 ZNF738Q8NE65 137 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 PXT1Q8NFP0 134 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 LHFPL5Q8TAF8 219 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 PP6455Q8WZ26 134 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 RPUSD4Q96CM3 377 aaKnown RBP4.38□□□□□ -1.71
EPHA4-204ENST00000415749 UBE2E2Q96LR5 201 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 KIR2DL4Q99706 377 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 SAV1Q9H4B6 383 aaPredicted RBP4.38□□□□□ -1.71
EPHA4-204ENST00000415749 BANF2Q9H503 90 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 ZNF581Q9P0T4 197 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 KAAG1Q9UBP8 84 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 GLS2Q9UI32 602 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 OR51B2Q9Y5P1 312 aa4.38□□□□□ -1.71
EPHA4-204ENST00000415749 IGKV1-27A0A075B6S5 117 aa4.37□□□□□ -1.71
EPHA4-204ENST00000415749 KANTRA0A1W2PQU2 76 aa4.37□□□□□ -1.71
EPHA4-204ENST00000415749 IQCF6A8MYZ5 107 aa4.37□□□□□ -1.71
EPHA4-204ENST00000415749 H7C423 109 aa4.37□□□□□ -1.71
EPHA4-204ENST00000415749 DNASE2O00115 360 aaPredicted RBP4.37□□□□□ -1.71
EPHA4-204ENST00000415749 GATCO43716 136 aaKnown RBP4.37□□□□□ -1.71
EPHA4-204ENST00000415749 SYNGR1O43759 233 aa4.37□□□□□ -1.71
EPHA4-204ENST00000415749 ADAP1O75689 374 aa4.37□□□□□ -1.71
EPHA4-204ENST00000415749 APOC1P02654 83 aa4.37□□□□□ -1.71
EPHA4-204ENST00000415749 PET100P0DJ07 73 aa4.37□□□□□ -1.71
EPHA4-204ENST00000415749 CD200P41217 278 aa4.37□□□□□ -1.71
EPHA4-204ENST00000415749 FGF8P55075 233 aaPredicted RBP4.37□□□□□ -1.71
EPHA4-204ENST00000415749 BLCAPP62952 87 aa4.37□□□□□ -1.71
EPHA4-204ENST00000415749 RPL18AQ02543 176 aaKnown RBP4.37□□□□□ -1.71
EPHA4-204ENST00000415749 REG3AQ06141 175 aa4.37□□□□□ -1.71
EPHA4-204ENST00000415749 C14orf177Q52M58 125 aa4.37□□□□□ -1.71
EPHA4-204ENST00000415749 PRSS54Q6PEW0 395 aa4.37□□□□□ -1.71
EPHA4-204ENST00000415749 DRAM2Q6UX65 266 aa4.37□□□□□ -1.71
EPHA4-204ENST00000415749 LINC00173Q6ZV60 143 aa4.37□□□□□ -1.71
EPHA4-204ENST00000415749 LRRC29Q8WV35 223 aa4.37□□□□□ -1.71
EPHA4-204ENST00000415749 C2orf50Q96LR7 162 aa4.37□□□□□ -1.71
EPHA4-204ENST00000415749 AQP10Q96PS8 301 aa4.37□□□□□ -1.71
EPHA4-204ENST00000415749 CCL13Q99616 98 aa4.37□□□□□ -1.71
EPHA4-204ENST00000415749 SLC25A22Q9H936 323 aa4.37□□□□□ -1.71
EPHA4-204ENST00000415749 COMMD9Q9P000 198 aa4.37□□□□□ -1.71
EPHA4-204ENST00000415749 POLR1DQ9Y2S0 133 aa4.37□□□□□ -1.71
EPHA4-204ENST00000415749 KLF12Q9Y4X4 402 aa4.37□□□□□ -1.71
EPHA4-204ENST00000415749 HERC2O95714 4834 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms