RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 RGS13O14921 159 aa10.9□□□□□ -0.66
SF3B1-204ENST00000414963 S100A7P31151 101 aa10.9□□□□□ -0.66
SF3B1-204ENST00000414963 MYCNOSP40205 109 aa10.9□□□□□ -0.66
SF3B1-204ENST00000414963 DEFB136Q30KP8 78 aa10.9□□□□□ -0.66
SF3B1-204ENST00000414963 FAM74A1Q5RGS3 127 aa10.9□□□□□ -0.66
SF3B1-204ENST00000414963 UNQ9165/PRO28630Q6UXU0 137 aa10.9□□□□□ -0.66
SF3B1-204ENST00000414963 C1QL4Q86Z23 238 aa10.9□□□□□ -0.66
SF3B1-204ENST00000414963 LRRC20Q8TCA0 184 aa10.9□□□□□ -0.66
SF3B1-204ENST00000414963 SAT2Q96F10 170 aaPredicted RBP10.9□□□□□ -0.66
SF3B1-204ENST00000414963 MRPL32Q9BYC8 188 aaKnown RBP10.9□□□□□ -0.66
SF3B1-204ENST00000414963 ACTR3CQ9C0K3 210 aaPredicted RBP10.9□□□□□ -0.66
SF3B1-204ENST00000414963 HIGD1AQ9Y241 93 aa10.9□□□□□ -0.66
SF3B1-204ENST00000414963 U3KQE9 123 aa10.9□□□□□ -0.66
SF3B1-204ENST00000414963 A8MWP6 167 aa10.89□□□□□ -0.67
SF3B1-204ENST00000414963 CRYBB3P26998 211 aa10.89□□□□□ -0.67
SF3B1-204ENST00000414963 RHOBP62745 196 aa10.89□□□□□ -0.67
SF3B1-204ENST00000414963 MBD3L1Q8WWY6 194 aa10.89□□□□□ -0.67
SF3B1-204ENST00000414963 SHANK2-AS3Q9BTD1 123 aa10.89□□□□□ -0.67
SF3B1-204ENST00000414963 PBDC1Q9BVG4 233 aa10.89□□□□□ -0.67
SF3B1-204ENST00000414963 SEPSECSQ9HD40 501 aaKnown RBP10.89□□□□□ -0.67
SF3B1-204ENST00000414963 DOK5Q9P104 306 aa10.89□□□□□ -0.67
SF3B1-204ENST00000414963 PFDN2Q9UHV9 154 aa10.89□□□□□ -0.67
SF3B1-204ENST00000414963 RABAC1Q9UI14 185 aa10.89□□□□□ -0.67
SF3B1-204ENST00000414963 FUT9Q9Y231 359 aa10.89□□□□□ -0.67
SF3B1-204ENST00000414963 UFC1Q9Y3C8 167 aa10.89□□□□□ -0.67
SF3B1-204ENST00000414963 H3BRN7 92 aa10.88□□□□□ -0.67
SF3B1-204ENST00000414963 NPPCP23582 126 aa10.88□□□□□ -0.67
SF3B1-204ENST00000414963 FHITP49789 147 aa10.88□□□□□ -0.67
SF3B1-204ENST00000414963 ZNF726P1Q15940 193 aa10.88□□□□□ -0.67
SF3B1-204ENST00000414963 NSUN5P1Q3KNT7 163 aa10.88□□□□□ -0.67
SF3B1-204ENST00000414963 FAM78BQ5VT40 261 aa10.88□□□□□ -0.67
SF3B1-204ENST00000414963 LINC00305Q7Z4B0 112 aa10.88□□□□□ -0.67
SF3B1-204ENST00000414963 FAM213BQ8TBF2 198 aa10.88□□□□□ -0.67
SF3B1-204ENST00000414963 METTL26Q96S19 204 aa10.88□□□□□ -0.67
SF3B1-204ENST00000414963 C20orf24Q9BUV8 137 aa10.88□□□□□ -0.67
SF3B1-204ENST00000414963 SLC25A39Q9BZJ4 359 aaPredicted RBP10.88□□□□□ -0.67
SF3B1-204ENST00000414963 DAZ1Q9NQZ3 744 aaKnown RBP10.88□□□□□ -0.67
SF3B1-204ENST00000414963 TECRQ9NZ01 308 aaKnown RBP10.88□□□□□ -0.67
SF3B1-204ENST00000414963 RNF24Q9Y225 148 aa10.88□□□□□ -0.67
SF3B1-204ENST00000414963 COL6A5A8TX70 2615 aa10.87□□□□□ -0.67
SF3B1-204ENST00000414963 TRAV1-1A0A0B4J248 108 aa10.87□□□□□ -0.67
SF3B1-204ENST00000414963 CTXND1A0A1B0GTU2 59 aa10.87□□□□□ -0.67
SF3B1-204ENST00000414963 A0A1W2PPV4 95 aa10.87□□□□□ -0.67
SF3B1-204ENST00000414963 ZNF320A2RRD8 509 aa10.87□□□□□ -0.67
SF3B1-204ENST00000414963 ZNF705EA8MWA4 302 aaPredicted RBP10.87□□□□□ -0.67
SF3B1-204ENST00000414963 CDC34P49427 236 aaPredicted RBP10.87□□□□□ -0.67
SF3B1-204ENST00000414963 SLURP1P55000 103 aa10.87□□□□□ -0.67
SF3B1-204ENST00000414963 SYNJ2BPP57105 145 aa10.87□□□□□ -0.67
SF3B1-204ENST00000414963 BLOC1S1P78537 153 aa10.87□□□□□ -0.67
SF3B1-204ENST00000414963 C1orf194Q5T5A4 169 aa10.87□□□□□ -0.67
SF3B1-204ENST00000414963 FAM122CQ6P4D5 195 aa10.87□□□□□ -0.67
SF3B1-204ENST00000414963 RAB24Q969Q5 203 aa10.87□□□□□ -0.67
SF3B1-204ENST00000414963 DUX3Q96PT4 197 aa10.87□□□□□ -0.67
SF3B1-204ENST00000414963 UHRF2Q96PU4 802 aa10.87□□□□□ -0.67
SF3B1-204ENST00000414963 IGHV3OR16-8A0A075B7F1 116 aa10.86□□□□□ -0.67
SF3B1-204ENST00000414963 TMEM213A2RRL7 107 aa10.86□□□□□ -0.67
SF3B1-204ENST00000414963 ZNF98A6NK75 572 aa10.86□□□□□ -0.67
SF3B1-204ENST00000414963 BUB3O43684 328 aa10.86□□□□□ -0.67
SF3B1-204ENST00000414963 H2AFB1P0C5Y9 115 aa10.86□□□□□ -0.67
SF3B1-204ENST00000414963 C8orf88P0DMB2 117 aa10.86□□□□□ -0.67
SF3B1-204ENST00000414963 TM4SF20Q53R12 229 aa10.86□□□□□ -0.67
SF3B1-204ENST00000414963 MORN5Q5VZ52 161 aa10.86□□□□□ -0.67
SF3B1-204ENST00000414963 SPATA31B1PQ5VZV4 182 aa10.86□□□□□ -0.67
SF3B1-204ENST00000414963 SHISA2Q6UWI4 295 aa10.86□□□□□ -0.67
SF3B1-204ENST00000414963 C12orf54Q6X4T0 127 aa10.86□□□□□ -0.67
SF3B1-204ENST00000414963 MIR17HGQ75NE6 70 aa10.86□□□□□ -0.67
SF3B1-204ENST00000414963 C3orf56Q8N813 242 aa10.86□□□□□ -0.67
SF3B1-204ENST00000414963 OR4F17Q8NGA8 305 aa10.86□□□□□ -0.67
SF3B1-204ENST00000414963 DLX4Q92988 240 aaPredicted RBP10.86□□□□□ -0.67
SF3B1-204ENST00000414963 MARC2Q969Z3 335 aa10.86□□□□□ -0.67
SF3B1-204ENST00000414963 FAM167A-AS1Q96KT0 104 aa10.86□□□□□ -0.67
SF3B1-204ENST00000414963 OR4F4Q96R69 305 aa10.86□□□□□ -0.67
SF3B1-204ENST00000414963 SMPXQ9UHP9 88 aa10.86□□□□□ -0.67
SF3B1-204ENST00000414963 IGHV7-4-1A0A0J9YVY3 117 aa10.85□□□□□ -0.67
SF3B1-204ENST00000414963 A0A1W2PS18 150 aa10.85□□□□□ -0.67
SF3B1-204ENST00000414963 NMBP08949 121 aa10.85□□□□□ -0.67
SF3B1-204ENST00000414963 STAG3L2P0CL84 134 aa10.85□□□□□ -0.67
SF3B1-204ENST00000414963 STAG3L3P0CL85 134 aa10.85□□□□□ -0.67
SF3B1-204ENST00000414963 TAS2R45P59539 299 aa10.85□□□□□ -0.67
SF3B1-204ENST00000414963 SSX7Q7RTT5 188 aa10.85□□□□□ -0.67
SF3B1-204ENST00000414963 STXBP6Q8NFX7 210 aa10.85□□□□□ -0.67
SF3B1-204ENST00000414963 OR9G4Q8NGQ1 327 aa10.85□□□□□ -0.67
SF3B1-204ENST00000414963 LYPD6BQ8NI32 183 aa10.85□□□□□ -0.67
SF3B1-204ENST00000414963 SCRT1Q9BWW7 348 aa10.85□□□□□ -0.67
SF3B1-204ENST00000414963 SLC25A22Q9H936 323 aa10.85□□□□□ -0.67
SF3B1-204ENST00000414963 TMEM14CQ9P0S9 112 aa10.85□□□□□ -0.67
SF3B1-204ENST00000414963 TRAV5A0A0B4J249 113 aa10.84□□□□□ -0.67
SF3B1-204ENST00000414963 ZNF207O43670 478 aaKnown RBP10.84□□□□□ -0.67
SF3B1-204ENST00000414963 APOHP02749 345 aaPredicted RBP10.84□□□□□ -0.67
SF3B1-204ENST00000414963 RIPPLY3P57055 190 aa10.84□□□□□ -0.67
SF3B1-204ENST00000414963 RAB14P61106 215 aa10.84□□□□□ -0.67
SF3B1-204ENST00000414963 CLLU1Q5K131 121 aa10.84□□□□□ -0.67
SF3B1-204ENST00000414963 IL34Q6ZMJ4 242 aa10.84□□□□□ -0.67
SF3B1-204ENST00000414963 PQLC2Q6ZP29 291 aa10.84□□□□□ -0.67
SF3B1-204ENST00000414963 SFT2D1Q8WV19 159 aa10.84□□□□□ -0.67
SF3B1-204ENST00000414963 NARS2Q96I59 477 aaKnown RBP10.84□□□□□ -0.67
SF3B1-204ENST00000414963 GPR82Q96P67 336 aa10.84□□□□□ -0.67
SF3B1-204ENST00000414963 SLC25A2Q9BXI2 301 aa10.84□□□□□ -0.67
SF3B1-204ENST00000414963 PEMTQ9UBM1 199 aa10.84□□□□□ -0.67
SF3B1-204ENST00000414963 MAP1LC3B2A6NCE7 125 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 191.8 ms