RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 MS4A6AQ9H2W1 248 aa10.96□□□□□ -0.65
LIMS1-206ENST00000414829 C19orf73Q9NVV2 129 aa10.96□□□□□ -0.65
LIMS1-206ENST00000414829 HYPMO75409 117 aa10.95□□□□□ -0.66
LIMS1-206ENST00000414829 APOHP02749 345 aaPredicted RBP10.95□□□□□ -0.66
LIMS1-206ENST00000414829 GIPP09681 153 aaPredicted RBP10.95□□□□□ -0.66
LIMS1-206ENST00000414829 PLP1P60201 277 aa10.95□□□□□ -0.66
LIMS1-206ENST00000414829 EWSR1Q01844 656 aaKnown RBP eCLIP10.95□□□□□ -0.66
LIMS1-206ENST00000414829 ARL16Q0P5N6 197 aa10.95□□□□□ -0.66
LIMS1-206ENST00000414829 STPG3Q8N7X2 389 aa10.95□□□□□ -0.66
LIMS1-206ENST00000414829 STXBP6Q8NFX7 210 aa10.95□□□□□ -0.66
LIMS1-206ENST00000414829 OR1B1Q8NGR6 318 aa10.95□□□□□ -0.66
LIMS1-206ENST00000414829 SRD5A3Q9H8P0 318 aa10.95□□□□□ -0.66
LIMS1-206ENST00000414829 SEPSECSQ9HD40 501 aaKnown RBP10.95□□□□□ -0.66
LIMS1-206ENST00000414829 OR5AC2Q9NZP5 309 aa10.95□□□□□ -0.66
LIMS1-206ENST00000414829 HIGD1AQ9Y241 93 aa10.95□□□□□ -0.66
LIMS1-206ENST00000414829 WDR83OSQ9Y284 106 aa10.95□□□□□ -0.66
LIMS1-206ENST00000414829 IGKV3-7A0A075B6H7 116 aa10.94□□□□□ -0.66
LIMS1-206ENST00000414829 ELOA3CA0A087WX78 387 aaPredicted RBP10.94□□□□□ -0.66
LIMS1-206ENST00000414829 UBE2L5PA0A1B0GUS4 154 aa10.94□□□□□ -0.66
LIMS1-206ENST00000414829 AGPAT2O15120 278 aa10.94□□□□□ -0.66
LIMS1-206ENST00000414829 ORM2P19652 201 aa10.94□□□□□ -0.66
LIMS1-206ENST00000414829 GALR1P47211 349 aa10.94□□□□□ -0.66
LIMS1-206ENST00000414829 CAMLGP49069 296 aa10.94□□□□□ -0.66
LIMS1-206ENST00000414829 MEOX2P50222 304 aa10.94□□□□□ -0.66
LIMS1-206ENST00000414829 SNRPD3P62318 126 aaKnown RBP10.94□□□□□ -0.66
LIMS1-206ENST00000414829 Q6ZRG5 221 aa10.94□□□□□ -0.66
LIMS1-206ENST00000414829 OR8I2Q8N0Y5 310 aa10.94□□□□□ -0.66
LIMS1-206ENST00000414829 ZMAT4Q9H898 229 aa10.94□□□□□ -0.66
LIMS1-206ENST00000414829 NRN1Q9NPD7 142 aa10.94□□□□□ -0.66
LIMS1-206ENST00000414829 MBD2Q9UBB5 411 aa10.94□□□□□ -0.66
LIMS1-206ENST00000414829 SELENOKQ9Y6D0 94 aa10.94□□□□□ -0.66
LIMS1-206ENST00000414829 TFPI2P48307 235 aa10.93□□□□□ -0.66
LIMS1-206ENST00000414829 FCN2Q15485 313 aa10.93□□□□□ -0.66
LIMS1-206ENST00000414829 GBGT1Q8N5D6 347 aa10.93□□□□□ -0.66
LIMS1-206ENST00000414829 DEFB125Q8N687 156 aa10.93□□□□□ -0.66
LIMS1-206ENST00000414829 OR5C1Q8NGR4 320 aa10.93□□□□□ -0.66
LIMS1-206ENST00000414829 CHAC2Q8WUX2 184 aa10.93□□□□□ -0.66
LIMS1-206ENST00000414829 H0YIZ8 118 aa10.92□□□□□ -0.66
LIMS1-206ENST00000414829 COX7A2P2O60397 106 aa10.92□□□□□ -0.66
LIMS1-206ENST00000414829 OR5G3P0C626 314 aa10.92□□□□□ -0.66
LIMS1-206ENST00000414829 LYL1P12980 280 aa10.92□□□□□ -0.66
LIMS1-206ENST00000414829 RPL7P18124 248 aaKnown RBP10.92□□□□□ -0.66
LIMS1-206ENST00000414829 CXCL3P19876 107 aa10.92□□□□□ -0.66
LIMS1-206ENST00000414829 APOC4P55056 127 aa10.92□□□□□ -0.66
LIMS1-206ENST00000414829 ODF3L2Q3SX64 289 aa10.92□□□□□ -0.66
LIMS1-206ENST00000414829 ZNF709Q8N972 641 aa10.92□□□□□ -0.66
LIMS1-206ENST00000414829 OR11H7Q8NGC8 314 aa10.92□□□□□ -0.66
LIMS1-206ENST00000414829 OR1L4Q8NGR5 311 aa10.92□□□□□ -0.66
LIMS1-206ENST00000414829 PFDN5Q99471 154 aa10.92□□□□□ -0.66
LIMS1-206ENST00000414829 MGST2Q99735 147 aa10.92□□□□□ -0.66
LIMS1-206ENST00000414829 GGTLC1Q9BX51 225 aa10.92□□□□□ -0.66
LIMS1-206ENST00000414829 LOC102724200A0A096LPH7 203 aaPredicted RBP10.91□□□□□ -0.66
LIMS1-206ENST00000414829 ZNF98A6NK75 572 aa10.91□□□□□ -0.66
LIMS1-206ENST00000414829 H3BRN7 92 aa10.91□□□□□ -0.66
LIMS1-206ENST00000414829 K7EQG2 157 aa10.91□□□□□ -0.66
LIMS1-206ENST00000414829 FGF7P21781 194 aa10.91□□□□□ -0.66
LIMS1-206ENST00000414829 RPL12P30050 165 aaKnown RBP10.91□□□□□ -0.66
LIMS1-206ENST00000414829 ID1P41134 155 aa10.91□□□□□ -0.66
LIMS1-206ENST00000414829 RPL29P47914 159 aaKnown RBP10.91□□□□□ -0.66
LIMS1-206ENST00000414829 WFDC3Q8IUB2 231 aa10.91□□□□□ -0.66
LIMS1-206ENST00000414829 DCANP1Q8TF63 244 aa10.91□□□□□ -0.66
LIMS1-206ENST00000414829 ATP5SQ99766 215 aa10.91□□□□□ -0.66
LIMS1-206ENST00000414829 SPATA25Q9BR10 227 aa10.91□□□□□ -0.66
LIMS1-206ENST00000414829 SHANK2-AS3Q9BTD1 123 aa10.91□□□□□ -0.66
LIMS1-206ENST00000414829 RNF126Q9BV68 326 aa10.91□□□□□ -0.66
LIMS1-206ENST00000414829 SLC25A39Q9BZJ4 359 aaPredicted RBP10.91□□□□□ -0.66
LIMS1-206ENST00000414829 ARL6Q9H0F7 186 aa10.91□□□□□ -0.66
LIMS1-206ENST00000414829 MAP6D1Q9H9H5 199 aa10.91□□□□□ -0.66
LIMS1-206ENST00000414829 HSPB11Q9Y547 144 aa10.91□□□□□ -0.66
LIMS1-206ENST00000414829 KIR2DL5BA0A0G2JN68 375 aa10.9□□□□□ -0.66
LIMS1-206ENST00000414829 KIR2DL5BA0A0G2JPC4 375 aa10.9□□□□□ -0.66
LIMS1-206ENST00000414829 C17orf112F2Z3M2 114 aa10.9□□□□□ -0.66
LIMS1-206ENST00000414829 IFNA5P01569 189 aa10.9□□□□□ -0.66
LIMS1-206ENST00000414829 GATA2P23769 480 aaPredicted RBP10.9□□□□□ -0.66
LIMS1-206ENST00000414829 B2MP61769 119 aa10.9□□□□□ -0.66
LIMS1-206ENST00000414829 NHLH2Q02577 135 aa10.9□□□□□ -0.66
LIMS1-206ENST00000414829 CLINT1Q14677 625 aa10.9□□□□□ -0.66
LIMS1-206ENST00000414829 KIR2DL5AQ8N109 375 aa10.9□□□□□ -0.66
LIMS1-206ENST00000414829 KIR2DL5BQ8NHK3 375 aa10.9□□□□□ -0.66
LIMS1-206ENST00000414829 WFDC10AQ9H1F0 79 aa10.9□□□□□ -0.66
LIMS1-206ENST00000414829 ARV1Q9H2C2 271 aa10.9□□□□□ -0.66
LIMS1-206ENST00000414829 SLC25A22Q9H936 323 aa10.9□□□□□ -0.66
LIMS1-206ENST00000414829 DOK5Q9P104 306 aa10.9□□□□□ -0.66
LIMS1-206ENST00000414829 UBQLN2Q9UHD9 624 aa10.9□□□□□ -0.66
LIMS1-206ENST00000414829 UBE2CO00762 179 aa10.89□□□□□ -0.67
LIMS1-206ENST00000414829 PSMB3P49720 205 aa10.89□□□□□ -0.67
LIMS1-206ENST00000414829 PRR20EP86478 221 aa10.89□□□□□ -0.67
LIMS1-206ENST00000414829 PRR20CP86479 221 aa10.89□□□□□ -0.67
LIMS1-206ENST00000414829 PRR20DP86480 221 aa10.89□□□□□ -0.67
LIMS1-206ENST00000414829 PRR20BP86481 221 aa10.89□□□□□ -0.67
LIMS1-206ENST00000414829 PRR20AP86496 221 aa10.89□□□□□ -0.67
LIMS1-206ENST00000414829 OPCMLQ14982 345 aa10.89□□□□□ -0.67
LIMS1-206ENST00000414829 C10orf113Q5VZT2 155 aa10.89□□□□□ -0.67
LIMS1-206ENST00000414829 SBSPONQ8IVN8 264 aa10.89□□□□□ -0.67
LIMS1-206ENST00000414829 TM2D3Q9BRN9 247 aa10.89□□□□□ -0.67
LIMS1-206ENST00000414829 NPCDR1Q9BY65 106 aa10.89□□□□□ -0.67
LIMS1-206ENST00000414829 SLC39A9Q9NUM3 307 aa10.89□□□□□ -0.67
LIMS1-206ENST00000414829 ISLRO14498 428 aa10.88□□□□□ -0.67
LIMS1-206ENST00000414829 ZNF688P0C7X2 276 aa10.88□□□□□ -0.67
LIMS1-206ENST00000414829 ATF4P18848 351 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms