RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 C12orf74Q32Q52 190 aa11.19□□□□□ -0.62
ACTB-202ENST00000414620 SPANXN5Q5MJ07 72 aa11.19□□□□□ -0.62
ACTB-202ENST00000414620 GGNBP1Q5YKI7 109 aa11.19□□□□□ -0.62
ACTB-202ENST00000414620 CCDC190Q86UF4 302 aa11.19□□□□□ -0.62
ACTB-202ENST00000414620 OR8I2Q8N0Y5 310 aa11.19□□□□□ -0.62
ACTB-202ENST00000414620 THAP8Q8NA92 274 aa11.19□□□□□ -0.62
ACTB-202ENST00000414620 OR4B1Q8NGF8 309 aa11.19□□□□□ -0.62
ACTB-202ENST00000414620 SAV1Q9H4B6 383 aaPredicted RBP11.19□□□□□ -0.62
ACTB-202ENST00000414620 F6UB75 175 aa11.18□□□□□ -0.62
ACTB-202ENST00000414620 GATA2P23769 480 aaPredicted RBP11.18□□□□□ -0.62
ACTB-202ENST00000414620 PSMB3P49720 205 aa11.18□□□□□ -0.62
ACTB-202ENST00000414620 EMP1P54849 157 aa11.18□□□□□ -0.62
ACTB-202ENST00000414620 FOXI2Q6ZQN5 318 aa11.18□□□□□ -0.62
ACTB-202ENST00000414620 CIB3Q96Q77 187 aaPredicted RBP11.18□□□□□ -0.62
ACTB-202ENST00000414620 SCRT1Q9BWW7 348 aa11.18□□□□□ -0.62
ACTB-202ENST00000414620 SRRQ9GZT4 340 aa11.18□□□□□ -0.62
ACTB-202ENST00000414620 SLC25A32Q9H2D1 315 aa11.18□□□□□ -0.62
ACTB-202ENST00000414620 SLC25A22Q9H936 323 aa11.18□□□□□ -0.62
ACTB-202ENST00000414620 DEFB131BA0A096LNP1 70 aa11.17□□□□□ -0.62
ACTB-202ENST00000414620 PRSS46E5RG02 174 aa11.17□□□□□ -0.62
ACTB-202ENST00000414620 ADAP1O75689 374 aa11.17□□□□□ -0.62
ACTB-202ENST00000414620 RPP30P78346 268 aaKnown RBP11.17□□□□□ -0.62
ACTB-202ENST00000414620 AKR1C1Q04828 323 aa11.17□□□□□ -0.62
ACTB-202ENST00000414620 C1orf194Q5T5A4 169 aa11.17□□□□□ -0.62
ACTB-202ENST00000414620 TMEM182Q6ZP80 229 aaPredicted RBP11.17□□□□□ -0.62
ACTB-202ENST00000414620 RBM38Q9H0Z9 239 aaKnown RBP11.17□□□□□ -0.62
ACTB-202ENST00000414620 SLC35B3Q9H1N7 401 aa11.17□□□□□ -0.62
ACTB-202ENST00000414620 LINC00854A0A1B0GVQ3 168 aa11.16□□□□□ -0.62
ACTB-202ENST00000414620 ORM2P19652 201 aa11.16□□□□□ -0.62
ACTB-202ENST00000414620 INPP1P49441 399 aa11.16□□□□□ -0.62
ACTB-202ENST00000414620 ZNF705AQ6ZN79 300 aaPredicted RBP11.16□□□□□ -0.62
ACTB-202ENST00000414620 ACOT7LQ6ZUV0 252 aa11.16□□□□□ -0.62
ACTB-202ENST00000414620 ZNF709Q8N972 641 aa11.16□□□□□ -0.62
ACTB-202ENST00000414620 C16orf92Q96LL3 132 aa11.16□□□□□ -0.62
ACTB-202ENST00000414620 C20orf173Q96LM9 149 aa11.16□□□□□ -0.62
ACTB-202ENST00000414620 FLVCR2Q9UPI3 526 aa11.16□□□□□ -0.62
ACTB-202ENST00000414620 C9orf170A2RU37 121 aa11.15□□□□□ -0.62
ACTB-202ENST00000414620 SMCO3A2RU48 225 aa11.15□□□□□ -0.62
ACTB-202ENST00000414620 ZNF98A6NK75 572 aa11.15□□□□□ -0.62
ACTB-202ENST00000414620 POLR2GP62487 172 aaKnown RBP eCLIP11.15□□□□□ -0.62
ACTB-202ENST00000414620 BAK1Q16611 211 aa11.15□□□□□ -0.62
ACTB-202ENST00000414620 SPANXN2Q5MJ10 180 aa11.15□□□□□ -0.62
ACTB-202ENST00000414620 TRIQKQ629K1 86 aa11.15□□□□□ -0.62
ACTB-202ENST00000414620 EBLN2Q6P2I7 272 aa11.15□□□□□ -0.62
ACTB-202ENST00000414620 BPIFCQ8NFQ6 507 aa11.15□□□□□ -0.62
ACTB-202ENST00000414620 OR1B1Q8NGR6 318 aa11.15□□□□□ -0.62
ACTB-202ENST00000414620 DEDD2Q8WXF8 326 aa11.15□□□□□ -0.62
ACTB-202ENST00000414620 DOK5Q9P104 306 aa11.15□□□□□ -0.62
ACTB-202ENST00000414620 STRAPQ9Y3F4 350 aaKnown RBP11.15□□□□□ -0.62
ACTB-202ENST00000414620 ZNF705FA8MVS1 300 aaPredicted RBP11.14□□□□□ -0.63
ACTB-202ENST00000414620 ISLRO14498 428 aa11.14□□□□□ -0.63
ACTB-202ENST00000414620 ZNF705DP0CH99 300 aaPredicted RBP11.14□□□□□ -0.63
ACTB-202ENST00000414620 ZNF705BP0CI00 300 aaPredicted RBP11.14□□□□□ -0.63
ACTB-202ENST00000414620 GALR1P47211 349 aa11.14□□□□□ -0.63
ACTB-202ENST00000414620 PSG9Q00887 426 aa11.14□□□□□ -0.63
ACTB-202ENST00000414620 FAM78BQ5VT40 261 aa11.14□□□□□ -0.63
ACTB-202ENST00000414620 RSG1Q9BU20 258 aa11.14□□□□□ -0.63
ACTB-202ENST00000414620 RNF126Q9BV68 326 aa11.14□□□□□ -0.63
ACTB-202ENST00000414620 TMEM147Q9BVK8 224 aa11.14□□□□□ -0.63
ACTB-202ENST00000414620 VPS13DQ5THJ4 4388 aa11.14□□□□□ -0.63
ACTB-202ENST00000414620 DNAH6Q9C0G6 4158 aa11.13□□□□□ -0.63
ACTB-202ENST00000414620 SSSCA1O60232 199 aa11.13□□□□□ -0.63
ACTB-202ENST00000414620 CCNKO75909 580 aa11.13□□□□□ -0.63
ACTB-202ENST00000414620 NDUFB6O95139 128 aa11.13□□□□□ -0.63
ACTB-202ENST00000414620 CFDP00746 253 aaPredicted RBP11.13□□□□□ -0.63
ACTB-202ENST00000414620 AMBPP02760 352 aa11.13□□□□□ -0.63
ACTB-202ENST00000414620 UBE2MP61081 183 aaKnown RBP11.13□□□□□ -0.63
ACTB-202ENST00000414620 FGL1Q08830 312 aa11.13□□□□□ -0.63
ACTB-202ENST00000414620 IGFL4Q6B9Z1 124 aa11.13□□□□□ -0.63
ACTB-202ENST00000414620 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.13□□□□□ -0.63
ACTB-202ENST00000414620 C17orf77Q96MU5 243 aa11.13□□□□□ -0.63
ACTB-202ENST00000414620 NEU1Q99519 415 aa11.13□□□□□ -0.63
ACTB-202ENST00000414620 C7orf50Q9BRJ6 194 aaKnown RBP11.13□□□□□ -0.63
ACTB-202ENST00000414620 RPRMQ9NS64 109 aa11.13□□□□□ -0.63
ACTB-202ENST00000414620 PSENENQ9NZ42 101 aa11.13□□□□□ -0.63
ACTB-202ENST00000414620 RFNGQ9Y644 331 aa11.13□□□□□ -0.63
ACTB-202ENST00000414620 DNAH10Q8IVF4 4471 aa11.12□□□□□ -0.63
ACTB-202ENST00000414620 A0A0J9YX75 114 aa11.12□□□□□ -0.63
ACTB-202ENST00000414620 SCGB1D2O95969 90 aa11.12□□□□□ -0.63
ACTB-202ENST00000414620 SPART-AS1P0CW21 52 aa11.12□□□□□ -0.63
ACTB-202ENST00000414620 ANXA7P20073 488 aaKnown RBP11.12□□□□□ -0.63
ACTB-202ENST00000414620 MEOX2P50222 304 aa11.12□□□□□ -0.63
ACTB-202ENST00000414620 PAX9P55771 341 aa11.12□□□□□ -0.63
ACTB-202ENST00000414620 RRAS2P62070 204 aaPredicted RBP11.12□□□□□ -0.63
ACTB-202ENST00000414620 ID3Q02535 119 aa11.12□□□□□ -0.63
ACTB-202ENST00000414620 CYP2G1PQ6ZSU1 146 aa11.12□□□□□ -0.63
ACTB-202ENST00000414620 PLA2G2EQ9NZK7 142 aa11.12□□□□□ -0.63
ACTB-202ENST00000414620 GOLT1BQ9Y3E0 138 aa11.12□□□□□ -0.63
ACTB-202ENST00000414620 NAP1L6A6NFF2 107 aa11.11□□□□□ -0.63
ACTB-202ENST00000414620 SMIM9A6NGZ8 99 aa11.11□□□□□ -0.63
ACTB-202ENST00000414620 H3BRN7 92 aa11.11□□□□□ -0.63
ACTB-202ENST00000414620 OR4E1P0C645 316 aa11.11□□□□□ -0.63
ACTB-202ENST00000414620 FAM222AQ5U5X8 452 aa11.11□□□□□ -0.63
ACTB-202ENST00000414620 SPATA31B1PQ5VZV4 182 aa11.11□□□□□ -0.63
ACTB-202ENST00000414620 TMEM144Q7Z5S9 345 aa11.11□□□□□ -0.63
ACTB-202ENST00000414620 C1orf158Q8N1D5 194 aa11.11□□□□□ -0.63
ACTB-202ENST00000414620 RNF182Q8N6D2 247 aa11.11□□□□□ -0.63
ACTB-202ENST00000414620 OR4D5Q8NGN0 318 aa11.11□□□□□ -0.63
ACTB-202ENST00000414620 CLUHP3Q96NS8 147 aa11.11□□□□□ -0.63
ACTB-202ENST00000414620 SDHCQ99643 169 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms