RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 SLC35E1Q96K37 410 aa11.75□□□□□ -0.53
SCAMP4-203ENST00000411971 TRGV9Q99603 122 aa11.75□□□□□ -0.53
SCAMP4-203ENST00000411971 RABL2AQ9UBK7 228 aaPredicted RBP11.75□□□□□ -0.53
SCAMP4-203ENST00000411971 RABL2BQ9UNT1 228 aa11.75□□□□□ -0.53
SCAMP4-203ENST00000411971 M0R2N4 97 aa11.74□□□□□ -0.53
SCAMP4-203ENST00000411971 PSMB3P49720 205 aa11.74□□□□□ -0.53
SCAMP4-203ENST00000411971 FAM78BQ5VT40 261 aa11.74□□□□□ -0.53
SCAMP4-203ENST00000411971 IGFL4Q6B9Z1 124 aa11.74□□□□□ -0.53
SCAMP4-203ENST00000411971 LRTM2Q8N967 370 aa11.74□□□□□ -0.53
SCAMP4-203ENST00000411971 OR4B1Q8NGF8 309 aa11.74□□□□□ -0.53
SCAMP4-203ENST00000411971 MCFD2Q8NI22 146 aa11.74□□□□□ -0.53
SCAMP4-203ENST00000411971 SCGB3A2Q96PL1 93 aa11.74□□□□□ -0.53
SCAMP4-203ENST00000411971 BCL7BQ9BQE9 202 aa11.74□□□□□ -0.53
SCAMP4-203ENST00000411971 SLC25A32Q9H2D1 315 aa11.74□□□□□ -0.53
SCAMP4-203ENST00000411971 A0A0J9YX75 114 aa11.73□□□□□ -0.53
SCAMP4-203ENST00000411971 PRB4P10163 310 aaPredicted RBP11.73□□□□□ -0.53
SCAMP4-203ENST00000411971 PPP1R1AQ13522 171 aa11.73□□□□□ -0.53
SCAMP4-203ENST00000411971 FAM222AQ5U5X8 452 aa11.73□□□□□ -0.53
SCAMP4-203ENST00000411971 AMTNQ6UX39 209 aa11.73□□□□□ -0.53
SCAMP4-203ENST00000411971 POM121L12Q8N7R1 296 aa11.73□□□□□ -0.53
SCAMP4-203ENST00000411971 DKK2Q9UBU2 259 aa11.73□□□□□ -0.53
SCAMP4-203ENST00000411971 A8MTW9 85 aa11.72□□□□□ -0.53
SCAMP4-203ENST00000411971 SNRPGP15A8MWD9 76 aa11.72□□□□□ -0.53
SCAMP4-203ENST00000411971 WRBO00258 174 aa11.72□□□□□ -0.53
SCAMP4-203ENST00000411971 VAMP1P23763 118 aa11.72□□□□□ -0.53
SCAMP4-203ENST00000411971 PAX9P55771 341 aa11.72□□□□□ -0.53
SCAMP4-203ENST00000411971 SRPXP78539 464 aa11.72□□□□□ -0.53
SCAMP4-203ENST00000411971 TMEM128Q5BJH2 165 aa11.72□□□□□ -0.53
SCAMP4-203ENST00000411971 C1orf194Q5T5A4 169 aa11.72□□□□□ -0.53
SCAMP4-203ENST00000411971 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.72□□□□□ -0.53
SCAMP4-203ENST00000411971 CLUHP3Q96NS8 147 aa11.72□□□□□ -0.53
SCAMP4-203ENST00000411971 CACFD1Q9UGQ2 172 aa11.72□□□□□ -0.53
SCAMP4-203ENST00000411971 PAIP2BQ9ULR5 123 aaKnown RBP11.72□□□□□ -0.53
SCAMP4-203ENST00000411971 TRAV8-2A0A0B4J237 113 aa11.71□□□□□ -0.53
SCAMP4-203ENST00000411971 DUXBA0A1W2PPF3 345 aa11.71□□□□□ -0.53
SCAMP4-203ENST00000411971 H3BP45 60 aa11.71□□□□□ -0.53
SCAMP4-203ENST00000411971 HOXB5P09067 269 aa11.71□□□□□ -0.53
SCAMP4-203ENST00000411971 SPART-AS1P0CW21 52 aa11.71□□□□□ -0.53
SCAMP4-203ENST00000411971 ANXA3P12429 323 aa11.71□□□□□ -0.53
SCAMP4-203ENST00000411971 ATP5IP56385 69 aaPredicted RBP11.71□□□□□ -0.53
SCAMP4-203ENST00000411971 PYDC2Q56P42 97 aa11.71□□□□□ -0.53
SCAMP4-203ENST00000411971 OR8I2Q8N0Y5 310 aa11.71□□□□□ -0.53
SCAMP4-203ENST00000411971 COQ8AQ8NI60 647 aa11.71□□□□□ -0.53
SCAMP4-203ENST00000411971 NDUFAF3Q9BU61 184 aa11.71□□□□□ -0.53
SCAMP4-203ENST00000411971 SLC25A22Q9H936 323 aa11.71□□□□□ -0.53
SCAMP4-203ENST00000411971 RFNGQ9Y644 331 aa11.71□□□□□ -0.53
SCAMP4-203ENST00000411971 ZNF98A6NK75 572 aa11.7□□□□□ -0.54
SCAMP4-203ENST00000411971 ISLRO14498 428 aa11.7□□□□□ -0.54
SCAMP4-203ENST00000411971 CCNKO75909 580 aa11.7□□□□□ -0.54
SCAMP4-203ENST00000411971 SFT2D2O95562 160 aa11.7□□□□□ -0.54
SCAMP4-203ENST00000411971 SLC25A6P12236 298 aa11.7□□□□□ -0.54
SCAMP4-203ENST00000411971 ID1P41134 155 aa11.7□□□□□ -0.54
SCAMP4-203ENST00000411971 PSG9Q00887 426 aa11.7□□□□□ -0.54
SCAMP4-203ENST00000411971 GGNBP1Q5YKI7 109 aa11.7□□□□□ -0.54
SCAMP4-203ENST00000411971 PPP1R14BQ96C90 147 aa11.7□□□□□ -0.54
SCAMP4-203ENST00000411971 RSG1Q9BU20 258 aa11.7□□□□□ -0.54
SCAMP4-203ENST00000411971 YTHDF2Q9Y5A9 579 aaKnown RBP11.7□□□□□ -0.54
SCAMP4-203ENST00000411971 RYR1P21817 5038 aa11.7□□□□□ -0.54
SCAMP4-203ENST00000411971 MUC4Q99102 2169 aa11.69□□□□□ -0.54
SCAMP4-203ENST00000411971 SMIM9A6NGZ8 99 aa11.69□□□□□ -0.54
SCAMP4-203ENST00000411971 CRXO43186 299 aaPredicted RBP11.69□□□□□ -0.54
SCAMP4-203ENST00000411971 SYNGR2O43760 224 aa11.69□□□□□ -0.54
SCAMP4-203ENST00000411971 ADAP1O75689 374 aa11.69□□□□□ -0.54
SCAMP4-203ENST00000411971 P0DMU3 169 aa11.69□□□□□ -0.54
SCAMP4-203ENST00000411971 FAM231AP0DMU4 169 aa11.69□□□□□ -0.54
SCAMP4-203ENST00000411971 FAM231CP0DMU5 169 aa11.69□□□□□ -0.54
SCAMP4-203ENST00000411971 NUP62P37198 522 aaPredicted RBP11.69□□□□□ -0.54
SCAMP4-203ENST00000411971 RAB11AP62491 216 aa11.69□□□□□ -0.54
SCAMP4-203ENST00000411971 CCDC190Q86UF4 302 aa11.69□□□□□ -0.54
SCAMP4-203ENST00000411971 TOMM5Q8N4H5 51 aa11.69□□□□□ -0.54
SCAMP4-203ENST00000411971 RNF182Q8N6D2 247 aa11.69□□□□□ -0.54
SCAMP4-203ENST00000411971 IGLV2-18A0A075B6J9 118 aa11.68□□□□□ -0.54
SCAMP4-203ENST00000411971 LOC102723971A0A1B0GUV8 181 aa11.68□□□□□ -0.54
SCAMP4-203ENST00000411971 PMS2P5A8MQ11 134 aa11.68□□□□□ -0.54
SCAMP4-203ENST00000411971 HTN3P15516 51 aa11.68□□□□□ -0.54
SCAMP4-203ENST00000411971 ORM2P19652 201 aa11.68□□□□□ -0.54
SCAMP4-203ENST00000411971 SPANXN5Q5MJ07 72 aa11.68□□□□□ -0.54
SCAMP4-203ENST00000411971 Q6ZR54 194 aa11.68□□□□□ -0.54
SCAMP4-203ENST00000411971 ACOT7LQ6ZUV0 252 aa11.68□□□□□ -0.54
SCAMP4-203ENST00000411971 CENPSQ8N2Z9 138 aa11.68□□□□□ -0.54
SCAMP4-203ENST00000411971 C16orf92Q96LL3 132 aa11.68□□□□□ -0.54
SCAMP4-203ENST00000411971 NIPSNAP3BQ9BS92 247 aa11.68□□□□□ -0.54
SCAMP4-203ENST00000411971 TMEM189A5PLL7 270 aa11.67□□□□□ -0.54
SCAMP4-203ENST00000411971 PRSS29PA6NIE9 313 aa11.67□□□□□ -0.54
SCAMP4-203ENST00000411971 M0R2Z0 102 aa11.67□□□□□ -0.54
SCAMP4-203ENST00000411971 POLR2GP62487 172 aaKnown RBP eCLIP11.67□□□□□ -0.54
SCAMP4-203ENST00000411971 LINC00336Q6ZUF6 198 aa11.67□□□□□ -0.54
SCAMP4-203ENST00000411971 DOK5Q9P104 306 aa11.67□□□□□ -0.54
SCAMP4-203ENST00000411971 FLVCR2Q9UPI3 526 aa11.67□□□□□ -0.54
SCAMP4-203ENST00000411971 TMED3Q9Y3Q3 217 aa11.67□□□□□ -0.54
SCAMP4-203ENST00000411971 ZNF705GA8MUZ8 300 aaPredicted RBP11.66□□□□□ -0.54
SCAMP4-203ENST00000411971 H3BRN7 92 aa11.66□□□□□ -0.54
SCAMP4-203ENST00000411971 FAUP35544 74 aaKnown RBP11.66□□□□□ -0.54
SCAMP4-203ENST00000411971 CNN1P51911 297 aaKnown RBP11.66□□□□□ -0.54
SCAMP4-203ENST00000411971 ID3Q02535 119 aa11.66□□□□□ -0.54
SCAMP4-203ENST00000411971 EBLN2Q6P2I7 272 aa11.66□□□□□ -0.54
SCAMP4-203ENST00000411971 OR11H7Q8NGC8 314 aa11.66□□□□□ -0.54
SCAMP4-203ENST00000411971 OR1B1Q8NGR6 318 aa11.66□□□□□ -0.54
SCAMP4-203ENST00000411971 SLC25A21Q9BQT8 299 aaPredicted RBP11.66□□□□□ -0.54
SCAMP4-203ENST00000411971 RBM38Q9H0Z9 239 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms