RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 PRR20CP86479 221 aa16.1■□□□□ 0.17
MSH6-202ENST00000411819 PRR20DP86480 221 aa16.1■□□□□ 0.17
MSH6-202ENST00000411819 PRR20BP86481 221 aa16.1■□□□□ 0.17
MSH6-202ENST00000411819 PRR20AP86496 221 aa16.1■□□□□ 0.17
MSH6-202ENST00000411819 SPANXN2Q5MJ10 180 aa16.1■□□□□ 0.17
MSH6-202ENST00000411819 GGNBP1Q5YKI7 109 aa16.1■□□□□ 0.17
MSH6-202ENST00000411819 ZNF767PQ75MW2 155 aa16.1■□□□□ 0.17
MSH6-202ENST00000411819 THAP8Q8NA92 274 aa16.1■□□□□ 0.17
MSH6-202ENST00000411819 AKR1C1Q04828 323 aa16.09■□□□□ 0.17
MSH6-202ENST00000411819 SPANXN5Q5MJ07 72 aa16.09■□□□□ 0.17
MSH6-202ENST00000411819 FOXI2Q6ZQN5 318 aa16.09■□□□□ 0.17
MSH6-202ENST00000411819 OR4B1Q8NGF8 309 aa16.09■□□□□ 0.17
MSH6-202ENST00000411819 SAV1Q9H4B6 383 aaPredicted RBP16.09■□□□□ 0.17
MSH6-202ENST00000411819 IGHV4-4A0A075B6R2 117 aa16.08■□□□□ 0.16
MSH6-202ENST00000411819 IGHV3OR16-12A0A075B7B8 117 aa16.08■□□□□ 0.16
MSH6-202ENST00000411819 SOCS3O14543 225 aa16.08■□□□□ 0.16
MSH6-202ENST00000411819 SLC25A22Q9H936 323 aa16.08■□□□□ 0.16
MSH6-202ENST00000411819 VPS13DQ5THJ4 4388 aa16.07■□□□□ 0.16
MSH6-202ENST00000411819 CFDP00746 253 aaPredicted RBP16.07■□□□□ 0.16
MSH6-202ENST00000411819 TRIQKQ629K1 86 aa16.07■□□□□ 0.16
MSH6-202ENST00000411819 SRRQ9GZT4 340 aa16.07■□□□□ 0.16
MSH6-202ENST00000411819 RBM38Q9H0Z9 239 aaKnown RBP16.07■□□□□ 0.16
MSH6-202ENST00000411819 STRAPQ9Y3F4 350 aaKnown RBP16.07■□□□□ 0.16
MSH6-202ENST00000411819 DNAH10Q8IVF4 4471 aa16.07■□□□□ 0.16
MSH6-202ENST00000411819 PRSS46E5RG02 174 aa16.06■□□□□ 0.16
MSH6-202ENST00000411819 ISLRO14498 428 aa16.06■□□□□ 0.16
MSH6-202ENST00000411819 ADAP1O75689 374 aa16.06■□□□□ 0.16
MSH6-202ENST00000411819 GALR1P47211 349 aa16.06■□□□□ 0.16
MSH6-202ENST00000411819 UBE2MP61081 183 aaKnown RBP16.06■□□□□ 0.16
MSH6-202ENST00000411819 C12orf74Q32Q52 190 aa16.06■□□□□ 0.16
MSH6-202ENST00000411819 ACOT7LQ6ZUV0 252 aa16.06■□□□□ 0.16
MSH6-202ENST00000411819 BPIFCQ8NFQ6 507 aa16.06■□□□□ 0.16
MSH6-202ENST00000411819 C16orf92Q96LL3 132 aa16.06■□□□□ 0.16
MSH6-202ENST00000411819 DEFB131BA0A096LNP1 70 aa16.05■□□□□ 0.16
MSH6-202ENST00000411819 C9orf170A2RU37 121 aa16.05■□□□□ 0.16
MSH6-202ENST00000411819 SMCO3A2RU48 225 aa16.05■□□□□ 0.16
MSH6-202ENST00000411819 ORM2P19652 201 aa16.05■□□□□ 0.16
MSH6-202ENST00000411819 GATA2P23769 480 aaPredicted RBP16.05■□□□□ 0.16
MSH6-202ENST00000411819 MEOX2P50222 304 aa16.05■□□□□ 0.16
MSH6-202ENST00000411819 EMP1P54849 157 aa16.05■□□□□ 0.16
MSH6-202ENST00000411819 SAMD13Q5VXD3 122 aa16.05■□□□□ 0.16
MSH6-202ENST00000411819 EBLN2Q6P2I7 272 aa16.05■□□□□ 0.16
MSH6-202ENST00000411819 ZNF705AQ6ZN79 300 aaPredicted RBP16.05■□□□□ 0.16
MSH6-202ENST00000411819 SLC25A32Q9H2D1 315 aa16.05■□□□□ 0.16
MSH6-202ENST00000411819 F6UB75 175 aa16.04■□□□□ 0.16
MSH6-202ENST00000411819 OR1B1Q8NGR6 318 aa16.04■□□□□ 0.16
MSH6-202ENST00000411819 NEU1Q99519 415 aa16.04■□□□□ 0.16
MSH6-202ENST00000411819 RNF126Q9BV68 326 aa16.04■□□□□ 0.16
MSH6-202ENST00000411819 TMEM147Q9BVK8 224 aa16.04■□□□□ 0.16
MSH6-202ENST00000411819 SLC35B3Q9H1N7 401 aa16.04■□□□□ 0.16
MSH6-202ENST00000411819 RPRMQ9NS64 109 aa16.04■□□□□ 0.16
MSH6-202ENST00000411819 DNAH6Q9C0G6 4158 aa16.03■□□□□ 0.16
MSH6-202ENST00000411819 LINC00854A0A1B0GVQ3 168 aa16.03■□□□□ 0.16
MSH6-202ENST00000411819 NAP1L6A6NFF2 107 aa16.03■□□□□ 0.16
MSH6-202ENST00000411819 ZNF98A6NK75 572 aa16.03■□□□□ 0.16
MSH6-202ENST00000411819 ZNF705FA8MVS1 300 aaPredicted RBP16.03■□□□□ 0.16
MSH6-202ENST00000411819 NDUFB6O95139 128 aa16.03■□□□□ 0.16
MSH6-202ENST00000411819 ZNF705DP0CH99 300 aaPredicted RBP16.03■□□□□ 0.16
MSH6-202ENST00000411819 ZNF705BP0CI00 300 aaPredicted RBP16.03■□□□□ 0.16
MSH6-202ENST00000411819 POLR2GP62487 172 aaKnown RBP eCLIP16.03■□□□□ 0.16
MSH6-202ENST00000411819 BAK1Q16611 211 aa16.03■□□□□ 0.16
MSH6-202ENST00000411819 FAM78BQ5VT40 261 aa16.03■□□□□ 0.16
MSH6-202ENST00000411819 SPATA31B1PQ5VZV4 182 aa16.03■□□□□ 0.16
MSH6-202ENST00000411819 ZNF709Q8N972 641 aa16.03■□□□□ 0.16
MSH6-202ENST00000411819 SLC45A2Q9UMX9 530 aa16.03■□□□□ 0.16
MSH6-202ENST00000411819 FLVCR2Q9UPI3 526 aa16.03■□□□□ 0.16
MSH6-202ENST00000411819 IFNA21P01568 189 aa16.02■□□□□ 0.16
MSH6-202ENST00000411819 AMBPP02760 352 aa16.02■□□□□ 0.16
MSH6-202ENST00000411819 PAX9P55771 341 aa16.02■□□□□ 0.16
MSH6-202ENST00000411819 PSG9Q00887 426 aa16.02■□□□□ 0.16
MSH6-202ENST00000411819 TMEM182Q6ZP80 229 aaPredicted RBP16.02■□□□□ 0.16
MSH6-202ENST00000411819 RSG1Q9BU20 258 aa16.02■□□□□ 0.16
MSH6-202ENST00000411819 PSENENQ9NZ42 101 aa16.02■□□□□ 0.16
MSH6-202ENST00000411819 A0A0J9YX75 114 aa16.01■□□□□ 0.15
MSH6-202ENST00000411819 TMEM189A5PLL7 270 aa16.01■□□□□ 0.15
MSH6-202ENST00000411819 ZNF701M0R085 212 aaPredicted RBP16.01■□□□□ 0.15
MSH6-202ENST00000411819 SSSCA1O60232 199 aa16.01■□□□□ 0.15
MSH6-202ENST00000411819 S100A7P31151 101 aa16.01■□□□□ 0.15
MSH6-202ENST00000411819 C20orf173Q96LM9 149 aa16.01■□□□□ 0.15
MSH6-202ENST00000411819 CLUHP3Q96NS8 147 aa16.01■□□□□ 0.15
MSH6-202ENST00000411819 C7orf50Q9BRJ6 194 aaKnown RBP16.01■□□□□ 0.15
MSH6-202ENST00000411819 DOK5Q9P104 306 aa16.01■□□□□ 0.15
MSH6-202ENST00000411819 GOLT1BQ9Y3E0 138 aa16.01■□□□□ 0.15
MSH6-202ENST00000411819 RFNGQ9Y644 331 aa16.01■□□□□ 0.15
MSH6-202ENST00000411819 SMIM9A6NGZ8 99 aa16■□□□□ 0.15
MSH6-202ENST00000411819 SCGB1D2O95969 90 aa16■□□□□ 0.15
MSH6-202ENST00000411819 OR4E1P0C645 316 aa16■□□□□ 0.15
MSH6-202ENST00000411819 SPART-AS1P0CW21 52 aa16■□□□□ 0.15
MSH6-202ENST00000411819 ID3Q02535 119 aa16■□□□□ 0.15
MSH6-202ENST00000411819 C4orf46Q504U0 113 aa16■□□□□ 0.15
MSH6-202ENST00000411819 TMEM144Q7Z5S9 345 aa16■□□□□ 0.15
MSH6-202ENST00000411819 GPR82Q96P67 336 aa16■□□□□ 0.15
MSH6-202ENST00000411819 SCRT1Q9BWW7 348 aa16■□□□□ 0.15
MSH6-202ENST00000411819 IL5P05113 134 aa15.99■□□□□ 0.15
MSH6-202ENST00000411819 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.99■□□□□ 0.15
MSH6-202ENST00000411819 CYP2G1PQ6ZSU1 146 aa15.99■□□□□ 0.15
MSH6-202ENST00000411819 OR4D5Q8NGN0 318 aa15.99■□□□□ 0.15
MSH6-202ENST00000411819 NDUFAF3Q9BU61 184 aa15.99■□□□□ 0.15
MSH6-202ENST00000411819 CENPXA8MT69 81 aa15.98■□□□□ 0.15
MSH6-202ENST00000411819 ANXA7P20073 488 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms