RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 ZNF79Q15937 498 aa10.63□□□□□ -0.71
CBX3-203ENST00000409747 ZNF705AQ6ZN79 300 aaPredicted RBP10.63□□□□□ -0.71
CBX3-203ENST00000409747 WDR12Q9GZL7 423 aaKnown RBP10.63□□□□□ -0.71
CBX3-203ENST00000409747 SLC45A2Q9UMX9 530 aa10.63□□□□□ -0.71
CBX3-203ENST00000409747 DNAH6Q9C0G6 4158 aa10.62□□□□□ -0.71
CBX3-203ENST00000409747 SMIM9A6NGZ8 99 aa10.62□□□□□ -0.71
CBX3-203ENST00000409747 AMBPP02760 352 aa10.62□□□□□ -0.71
CBX3-203ENST00000409747 UBE2MP61081 183 aaKnown RBP10.62□□□□□ -0.71
CBX3-203ENST00000409747 PRR20EP86478 221 aa10.62□□□□□ -0.71
CBX3-203ENST00000409747 PRR20CP86479 221 aa10.62□□□□□ -0.71
CBX3-203ENST00000409747 PRR20DP86480 221 aa10.62□□□□□ -0.71
CBX3-203ENST00000409747 PRR20BP86481 221 aa10.62□□□□□ -0.71
CBX3-203ENST00000409747 PRR20AP86496 221 aa10.62□□□□□ -0.71
CBX3-203ENST00000409747 CELA1Q9UNI1 258 aa10.62□□□□□ -0.71
CBX3-203ENST00000409747 DEFB131BA0A096LNP1 70 aa10.61□□□□□ -0.71
CBX3-203ENST00000409747 SOCS3O14543 225 aa10.61□□□□□ -0.71
CBX3-203ENST00000409747 GALR1P47211 349 aa10.61□□□□□ -0.71
CBX3-203ENST00000409747 C12orf74Q32Q52 190 aa10.61□□□□□ -0.71
CBX3-203ENST00000409747 SPANXN2Q5MJ10 180 aa10.61□□□□□ -0.71
CBX3-203ENST00000409747 EBLN2Q6P2I7 272 aa10.61□□□□□ -0.71
CBX3-203ENST00000409747 CCDC190Q86UF4 302 aa10.61□□□□□ -0.71
CBX3-203ENST00000409747 IGKV1OR2-108A0A075B7D4 117 aa10.61□□□□□ -0.71
CBX3-203ENST00000409747 TEX48A0A1B0GUV7 120 aa10.61□□□□□ -0.71
CBX3-203ENST00000409747 ZNF705FA8MVS1 300 aaPredicted RBP10.61□□□□□ -0.71
CBX3-203ENST00000409747 WRBO00258 174 aa10.61□□□□□ -0.71
CBX3-203ENST00000409747 IGKV3-20P01619 116 aa10.61□□□□□ -0.71
CBX3-203ENST00000409747 HOXB5P09067 269 aa10.61□□□□□ -0.71
CBX3-203ENST00000409747 ZNF705DP0CH99 300 aaPredicted RBP10.61□□□□□ -0.71
CBX3-203ENST00000409747 ZNF705BP0CI00 300 aaPredicted RBP10.61□□□□□ -0.71
CBX3-203ENST00000409747 GDF5OSQ5U4N7 250 aa10.61□□□□□ -0.71
CBX3-203ENST00000409747 BPIFCQ8NFQ6 507 aa10.61□□□□□ -0.71
CBX3-203ENST00000409747 MAGT1Q9H0U3 335 aa10.61□□□□□ -0.71
CBX3-203ENST00000409747 RPRMQ9NS64 109 aa10.61□□□□□ -0.71
CBX3-203ENST00000409747 HECTD4Q9Y4D8 3996 aa10.6□□□□□ -0.71
CBX3-203ENST00000409747 SPART-AS1P0CW21 52 aa10.6□□□□□ -0.71
CBX3-203ENST00000409747 INPP1P49441 399 aa10.6□□□□□ -0.71
CBX3-203ENST00000409747 PAX9P55771 341 aa10.6□□□□□ -0.71
CBX3-203ENST00000409747 AKR1C1Q04828 323 aa10.6□□□□□ -0.71
CBX3-203ENST00000409747 SPANXN5Q5MJ07 72 aa10.6□□□□□ -0.71
CBX3-203ENST00000409747 OR4B1Q8NGF8 309 aa10.6□□□□□ -0.71
CBX3-203ENST00000409747 C16orf92Q96LL3 132 aa10.6□□□□□ -0.71
CBX3-203ENST00000409747 GPR82Q96P67 336 aa10.6□□□□□ -0.71
CBX3-203ENST00000409747 STRAPQ9Y3F4 350 aaKnown RBP10.6□□□□□ -0.71
CBX3-203ENST00000409747 RFNGQ9Y644 331 aa10.6□□□□□ -0.71
CBX3-203ENST00000409747 PRSS46E5RG02 174 aa10.59□□□□□ -0.71
CBX3-203ENST00000409747 PSG9Q00887 426 aa10.59□□□□□ -0.71
CBX3-203ENST00000409747 ZNF709Q8N972 641 aa10.59□□□□□ -0.71
CBX3-203ENST00000409747 OR4D5Q8NGN0 318 aa10.59□□□□□ -0.71
CBX3-203ENST00000409747 NDUFAF3Q9BU61 184 aa10.59□□□□□ -0.71
CBX3-203ENST00000409747 TMEM147Q9BVK8 224 aa10.59□□□□□ -0.71
CBX3-203ENST00000409747 GOLT1BQ9Y3E0 138 aa10.59□□□□□ -0.71
CBX3-203ENST00000409747 IGHV3OR16-12A0A075B7B8 117 aa10.58□□□□□ -0.72
CBX3-203ENST00000409747 NAP1L6A6NFF2 107 aa10.58□□□□□ -0.72
CBX3-203ENST00000409747 P0DMU3 169 aa10.58□□□□□ -0.72
CBX3-203ENST00000409747 FAM231AP0DMU4 169 aa10.58□□□□□ -0.72
CBX3-203ENST00000409747 FAM231CP0DMU5 169 aa10.58□□□□□ -0.72
CBX3-203ENST00000409747 FXYD7P58549 80 aa10.58□□□□□ -0.72
CBX3-203ENST00000409747 ZNF767PQ75MW2 155 aa10.58□□□□□ -0.72
CBX3-203ENST00000409747 OR1B1Q8NGR6 318 aa10.58□□□□□ -0.72
CBX3-203ENST00000409747 SLC25A32Q9H2D1 315 aa10.58□□□□□ -0.72
CBX3-203ENST00000409747 SLC25A22Q9H936 323 aa10.58□□□□□ -0.72
CBX3-203ENST00000409747 A0A0J9YX75 114 aa10.58□□□□□ -0.72
CBX3-203ENST00000409747 ZNF98A6NK75 572 aa10.58□□□□□ -0.72
CBX3-203ENST00000409747 H3BP45 60 aa10.58□□□□□ -0.72
CBX3-203ENST00000409747 ORM2P19652 201 aa10.58□□□□□ -0.72
CBX3-203ENST00000409747 DEFB1P60022 68 aa10.58□□□□□ -0.72
CBX3-203ENST00000409747 FAM78BQ5VT40 261 aa10.58□□□□□ -0.72
CBX3-203ENST00000409747 TRIQKQ629K1 86 aa10.58□□□□□ -0.72
CBX3-203ENST00000409747 ACOT7LQ6ZUV0 252 aa10.58□□□□□ -0.72
CBX3-203ENST00000409747 SRRQ9GZT4 340 aa10.58□□□□□ -0.72
CBX3-203ENST00000409747 C9orf170A2RU37 121 aa10.57□□□□□ -0.72
CBX3-203ENST00000409747 ZNF701M0R085 212 aaPredicted RBP10.57□□□□□ -0.72
CBX3-203ENST00000409747 NDUFB6O95139 128 aa10.57□□□□□ -0.72
CBX3-203ENST00000409747 IFNA21P01568 189 aa10.57□□□□□ -0.72
CBX3-203ENST00000409747 EMP1P54849 157 aa10.57□□□□□ -0.72
CBX3-203ENST00000409747 TMEM144Q7Z5S9 345 aa10.57□□□□□ -0.72
CBX3-203ENST00000409747 C7orf50Q9BRJ6 194 aaKnown RBP10.57□□□□□ -0.72
CBX3-203ENST00000409747 SLC35B3Q9H1N7 401 aa10.57□□□□□ -0.72
CBX3-203ENST00000409747 DOK5Q9P104 306 aa10.57□□□□□ -0.72
CBX3-203ENST00000409747 HBE1P02100 147 aa10.56□□□□□ -0.72
CBX3-203ENST00000409747 S100A7AQ86SG5 101 aa10.56□□□□□ -0.72
CBX3-203ENST00000409747 FAM210BQ96KR6 192 aa10.56□□□□□ -0.72
CBX3-203ENST00000409747 RSG1Q9BU20 258 aa10.56□□□□□ -0.72
CBX3-203ENST00000409747 SMCO3A2RU48 225 aa10.55□□□□□ -0.72
CBX3-203ENST00000409747 F6UB75 175 aa10.55□□□□□ -0.72
CBX3-203ENST00000409747 RAP2BP61225 183 aa10.55□□□□□ -0.72
CBX3-203ENST00000409747 ID3Q02535 119 aa10.55□□□□□ -0.72
CBX3-203ENST00000409747 RBM38Q9H0Z9 239 aaKnown RBP10.55□□□□□ -0.72
CBX3-203ENST00000409747 PSENENQ9NZ42 101 aa10.55□□□□□ -0.72
CBX3-203ENST00000409747 DKK2Q9UBU2 259 aa10.55□□□□□ -0.72
CBX3-203ENST00000409747 CENPXA8MT69 81 aa10.55□□□□□ -0.72
CBX3-203ENST00000409747 ADAP1O75689 374 aa10.55□□□□□ -0.72
CBX3-203ENST00000409747 DUSP14O95147 198 aaKnown RBP10.55□□□□□ -0.72
CBX3-203ENST00000409747 IL5P05113 134 aa10.55□□□□□ -0.72
CBX3-203ENST00000409747 SELENOTP62341 195 aa10.55□□□□□ -0.72
CBX3-203ENST00000409747 POLR2GP62487 172 aaKnown RBP eCLIP10.55□□□□□ -0.72
CBX3-203ENST00000409747 CYP2G1PQ6ZSU1 146 aa10.55□□□□□ -0.72
CBX3-203ENST00000409747 POM121L12Q8N7R1 296 aa10.55□□□□□ -0.72
CBX3-203ENST00000409747 NIPSNAP3BQ9BS92 247 aa10.55□□□□□ -0.72
CBX3-203ENST00000409747 A8MTW9 85 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms