RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 ADMP35318 185 aa12.11□□□□□ -0.47
SCAMP4-202ENST00000409472 YPEL3P61236 119 aaPredicted RBP12.11□□□□□ -0.47
SCAMP4-202ENST00000409472 FOXL1Q12952 345 aa12.11□□□□□ -0.47
SCAMP4-202ENST00000409472 UNQ5815/PRO19632Q6UWF5 114 aa12.11□□□□□ -0.47
SCAMP4-202ENST00000409472 ZNF355PQ9NSJ1 428 aa12.11□□□□□ -0.47
SCAMP4-202ENST00000409472 K7ERU9 68 aa12.1□□□□□ -0.47
SCAMP4-202ENST00000409472 SLC17A3O00476 420 aa12.1□□□□□ -0.47
SCAMP4-202ENST00000409472 MT-CO2P00403 227 aa12.1□□□□□ -0.47
SCAMP4-202ENST00000409472 C8orf88P0DMB2 117 aa12.1□□□□□ -0.47
SCAMP4-202ENST00000409472 SIGLECL1Q8N7X8 197 aa12.1□□□□□ -0.47
SCAMP4-202ENST00000409472 TXNDC17Q9BRA2 123 aa12.1□□□□□ -0.47
SCAMP4-202ENST00000409472 IGSF10Q6WRI0 2623 aa12.1□□□□□ -0.47
SCAMP4-202ENST00000409472 SERF1AO75920 110 aa12.1□□□□□ -0.47
SCAMP4-202ENST00000409472 RBP4P02753 201 aa12.1□□□□□ -0.47
SCAMP4-202ENST00000409472 CRISP2P16562 243 aa12.1□□□□□ -0.47
SCAMP4-202ENST00000409472 UBE2L3P68036 154 aaKnown RBP12.1□□□□□ -0.47
SCAMP4-202ENST00000409472 THAP8Q8NA92 274 aa12.1□□□□□ -0.47
SCAMP4-202ENST00000409472 SSBP3Q9BWW4 388 aaPredicted RBP12.1□□□□□ -0.47
SCAMP4-202ENST00000409472 UTP20O75691 2785 aaKnown RBP12.09□□□□□ -0.47
SCAMP4-202ENST00000409472 MAP1AP78559 2803 aaPredicted RBP12.09□□□□□ -0.47
SCAMP4-202ENST00000409472 GRIFINA4D1Z8 144 aa12.09□□□□□ -0.47
SCAMP4-202ENST00000409472 COX7A2P2O60397 106 aa12.09□□□□□ -0.47
SCAMP4-202ENST00000409472 SUB1P53999 127 aaKnown RBP eCLIP12.09□□□□□ -0.47
SCAMP4-202ENST00000409472 VAMP3Q15836 100 aa12.09□□□□□ -0.47
SCAMP4-202ENST00000409472 CENPWQ5EE01 88 aa12.09□□□□□ -0.47
SCAMP4-202ENST00000409472 PQLC2Q6ZP29 291 aa12.09□□□□□ -0.47
SCAMP4-202ENST00000409472 SRSF12Q8WXF0 261 aaKnown RBP12.09□□□□□ -0.47
SCAMP4-202ENST00000409472 TIMD4Q96H15 378 aa12.09□□□□□ -0.47
SCAMP4-202ENST00000409472 TMEM167BQ9NRX6 74 aa12.09□□□□□ -0.47
SCAMP4-202ENST00000409472 MDFIC2A0A1B0GVS7 189 aa12.08□□□□□ -0.47
SCAMP4-202ENST00000409472 CRYGCP07315 174 aa12.08□□□□□ -0.47
SCAMP4-202ENST00000409472 ZFP36P26651 326 aaKnown RBP12.08□□□□□ -0.47
SCAMP4-202ENST00000409472 KRTDAPP60985 99 aa12.08□□□□□ -0.47
SCAMP4-202ENST00000409472 BAGE3Q86Y29 109 aa12.08□□□□□ -0.47
SCAMP4-202ENST00000409472 BAGE2Q86Y30 109 aa12.08□□□□□ -0.47
SCAMP4-202ENST00000409472 DYNAPQ8N1N2 210 aa12.08□□□□□ -0.47
SCAMP4-202ENST00000409472 SGMS2Q8NHU3 365 aa12.08□□□□□ -0.47
SCAMP4-202ENST00000409472 EAF1Q96JC9 268 aaPredicted RBP12.08□□□□□ -0.47
SCAMP4-202ENST00000409472 FAM103A1Q9BTL3 118 aaKnown RBP12.08□□□□□ -0.47
SCAMP4-202ENST00000409472 GNLYP22749 145 aa12.08□□□□□ -0.48
SCAMP4-202ENST00000409472 S100A7P31151 101 aa12.08□□□□□ -0.48
SCAMP4-202ENST00000409472 BMI1P35226 326 aa12.08□□□□□ -0.48
SCAMP4-202ENST00000409472 HINT1P49773 126 aaPredicted RBP12.08□□□□□ -0.48
SCAMP4-202ENST00000409472 C10orf113Q5VZT2 155 aa12.08□□□□□ -0.48
SCAMP4-202ENST00000409472 PVRIGQ6DKI7 326 aa12.08□□□□□ -0.48
SCAMP4-202ENST00000409472 DTX2Q86UW9 622 aa12.08□□□□□ -0.48
SCAMP4-202ENST00000409472 CFHR4Q92496 578 aa12.08□□□□□ -0.48
SCAMP4-202ENST00000409472 LINC00479Q96M42 142 aa12.08□□□□□ -0.48
SCAMP4-202ENST00000409472 RNF24Q9Y225 148 aa12.08□□□□□ -0.48
SCAMP4-202ENST00000409472 ORM2P19652 201 aa12.07□□□□□ -0.48
SCAMP4-202ENST00000409472 TAS2R45P59539 299 aa12.07□□□□□ -0.48
SCAMP4-202ENST00000409472 RHOGP84095 191 aa12.07□□□□□ -0.48
SCAMP4-202ENST00000409472 CHODLQ9H9P2 273 aa12.07□□□□□ -0.48
SCAMP4-202ENST00000409472 UBTD1Q9HAC8 227 aa12.07□□□□□ -0.48
SCAMP4-202ENST00000409472 TNFRSF19Q9NS68 423 aa12.07□□□□□ -0.48
SCAMP4-202ENST00000409472 TP53TG3Q9ULZ0 132 aa12.07□□□□□ -0.48
SCAMP4-202ENST00000409472 AMMECR1Q9Y4X0 333 aaPredicted RBP12.07□□□□□ -0.48
SCAMP4-202ENST00000409472 FRMD6-AS1P0C7T7 363 aa12.07□□□□□ -0.48
SCAMP4-202ENST00000409472 HTR1DP28221 377 aa12.07□□□□□ -0.48
SCAMP4-202ENST00000409472 TSPOP30536 169 aa12.07□□□□□ -0.48
SCAMP4-202ENST00000409472 PLGLAQ15195 96 aa12.07□□□□□ -0.48
SCAMP4-202ENST00000409472 NHLRC2Q8NBF2 726 aa12.07□□□□□ -0.48
SCAMP4-202ENST00000409472 ITLN2Q8WWU7 325 aaPredicted RBP12.07□□□□□ -0.48
SCAMP4-202ENST00000409472 MRPL32Q9BYC8 188 aaKnown RBP12.07□□□□□ -0.48
SCAMP4-202ENST00000409472 CELSR2Q9HCU4 2923 aa12.07□□□□□ -0.48
SCAMP4-202ENST00000409472 LINC00305Q7Z4B0 112 aa12.06□□□□□ -0.48
SCAMP4-202ENST00000409472 OR11H6Q8NGC7 330 aa12.06□□□□□ -0.48
SCAMP4-202ENST00000409472 OR1B1Q8NGR6 318 aa12.06□□□□□ -0.48
SCAMP4-202ENST00000409472 FBXL7Q9UJT9 491 aa12.06□□□□□ -0.48
SCAMP4-202ENST00000409472 F11RQ9Y624 299 aaKnown RBP12.06□□□□□ -0.48
SCAMP4-202ENST00000409472 ODF3BA8MYP8 253 aa12.06□□□□□ -0.48
SCAMP4-202ENST00000409472 C9JCJ5 164 aa12.06□□□□□ -0.48
SCAMP4-202ENST00000409472 LINC00310P59036 64 aa12.06□□□□□ -0.48
SCAMP4-202ENST00000409472 Q0VG73 95 aa12.06□□□□□ -0.48
SCAMP4-202ENST00000409472 PRR27Q6MZM9 219 aa12.06□□□□□ -0.48
SCAMP4-202ENST00000409472 OR10G8Q8NGN5 311 aa12.06□□□□□ -0.48
SCAMP4-202ENST00000409472 NEU4Q8WWR8 484 aaPredicted RBP12.06□□□□□ -0.48
SCAMP4-202ENST00000409472 FXYD5Q96DB9 178 aa12.06□□□□□ -0.48
SCAMP4-202ENST00000409472 C19orf24Q9BVV8 132 aa12.06□□□□□ -0.48
SCAMP4-202ENST00000409472 HELTA6NFD8 242 aa12.05□□□□□ -0.48
SCAMP4-202ENST00000409472 TOX4O94842 621 aa12.05□□□□□ -0.48
SCAMP4-202ENST00000409472 IGLV2-8P01709 118 aa12.05□□□□□ -0.48
SCAMP4-202ENST00000409472 RNASE7Q9H1E1 156 aaKnown RBP12.05□□□□□ -0.48
SCAMP4-202ENST00000409472 MRPL27Q9P0M9 148 aaKnown RBP12.05□□□□□ -0.48
SCAMP4-202ENST00000409472 DPM3Q9P2X0 92 aa12.05□□□□□ -0.48
SCAMP4-202ENST00000409472 ARL2-SNX15V9GYD0 113 aa12.05□□□□□ -0.48
SCAMP4-202ENST00000409472 CRYBG3Q68DQ2 2970 aa12.05□□□□□ -0.48
SCAMP4-202ENST00000409472 TRAV9-1A0A075B6T8 112 aa12.05□□□□□ -0.48
SCAMP4-202ENST00000409472 TRAV34A0A0B4J273 112 aa12.05□□□□□ -0.48
SCAMP4-202ENST00000409472 H3BTX0 84 aa12.05□□□□□ -0.48
SCAMP4-202ENST00000409472 ZNF253O75346 499 aa12.05□□□□□ -0.48
SCAMP4-202ENST00000409472 GNG4P50150 75 aa12.05□□□□□ -0.48
SCAMP4-202ENST00000409472 VMO1Q7Z5L0 202 aa12.05□□□□□ -0.48
SCAMP4-202ENST00000409472 Q8N976 141 aa12.05□□□□□ -0.48
SCAMP4-202ENST00000409472 PAXXQ9BUH6 204 aa12.05□□□□□ -0.48
SCAMP4-202ENST00000409472 S4R3C0 116 aa12.05□□□□□ -0.48
SCAMP4-202ENST00000409472 FXYD3Q14802 87 aa12.04□□□□□ -0.48
SCAMP4-202ENST00000409472 KLF17Q5JT82 389 aaPredicted RBP12.04□□□□□ -0.48
SCAMP4-202ENST00000409472 Q6ZVH6 145 aa12.04□□□□□ -0.48
SCAMP4-202ENST00000409472 TMEM116Q8NCL8 245 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms