RNA–Protein interactions for RNA: ENST00000409387.5

SLC3A1-205, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 2,334 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-205ENST00000409387 RP1P56715 2156 aa9.38□□□□□ -0.91
SLC3A1-205ENST00000409387 ARID1BQ8NFD5 2236 aaPredicted RBP9.38□□□□□ -0.91
SLC3A1-205ENST00000409387 COX7CP15954 63 aa9.37□□□□□ -0.91
SLC3A1-205ENST00000409387 PSMB8P28062 276 aa9.37□□□□□ -0.91
SLC3A1-205ENST00000409387 EBI3Q14213 229 aa9.37□□□□□ -0.91
SLC3A1-205ENST00000409387 PHLDA2Q53GA4 152 aa9.37□□□□□ -0.91
SLC3A1-205ENST00000409387 ZNF627Q7L945 461 aa9.37□□□□□ -0.91
SLC3A1-205ENST00000409387 ZNF441Q8N8Z8 693 aa9.37□□□□□ -0.91
SLC3A1-205ENST00000409387 C15orf53Q8NAA6 179 aa9.37□□□□□ -0.91
SLC3A1-205ENST00000409387 TMEM255BQ8WV15 326 aa9.37□□□□□ -0.91
SLC3A1-205ENST00000409387 LRRC29Q8WV35 223 aa9.37□□□□□ -0.91
SLC3A1-205ENST00000409387 MRPL20Q9BYC9 149 aaKnown RBP9.37□□□□□ -0.91
SLC3A1-205ENST00000409387 BMPR1BO00238 502 aa9.37□□□□□ -0.91
SLC3A1-205ENST00000409387 VPREB1P12018 145 aa9.37□□□□□ -0.91
SLC3A1-205ENST00000409387 KLF5Q13887 457 aaPredicted RBP9.37□□□□□ -0.91
SLC3A1-205ENST00000409387 ZNF493Q6ZR52 646 aa9.37□□□□□ -0.91
SLC3A1-205ENST00000409387 FAM90A1Q86YD7 464 aa9.37□□□□□ -0.91
SLC3A1-205ENST00000409387 NFAM1Q8NET5 270 aaPredicted RBP9.37□□□□□ -0.91
SLC3A1-205ENST00000409387 Q9UF83 564 aa9.37□□□□□ -0.91
SLC3A1-205ENST00000409387 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.36□□□□□ -0.91
SLC3A1-205ENST00000409387 NDUFB2O95178 105 aa9.36□□□□□ -0.91
SLC3A1-205ENST00000409387 ZNF136P52737 540 aa9.36□□□□□ -0.91
SLC3A1-205ENST00000409387 MRPL2Q5T653 305 aaKnown RBP9.36□□□□□ -0.91
SLC3A1-205ENST00000409387 ZAR1Q86SH2 424 aa9.36□□□□□ -0.91
SLC3A1-205ENST00000409387 CIARTQ8N365 385 aaPredicted RBP9.36□□□□□ -0.91
SLC3A1-205ENST00000409387 RFLNBQ8N5W9 214 aa9.36□□□□□ -0.91
SLC3A1-205ENST00000409387 PDCD1LG2Q9BQ51 273 aa9.36□□□□□ -0.91
SLC3A1-205ENST00000409387 IMUPQ9GZP8 106 aa9.36□□□□□ -0.91
SLC3A1-205ENST00000409387 IGF1P05019 195 aa9.36□□□□□ -0.91
SLC3A1-205ENST00000409387 FOXC1Q12948 553 aa9.36□□□□□ -0.91
SLC3A1-205ENST00000409387 TRIP6Q15654 476 aaKnown RBP9.36□□□□□ -0.91
SLC3A1-205ENST00000409387 SLC25A45Q8N413 288 aa9.36□□□□□ -0.91
SLC3A1-205ENST00000409387 LINC00311Q8N616 119 aa9.36□□□□□ -0.91
SLC3A1-205ENST00000409387 NABP1Q96AH0 204 aa9.36□□□□□ -0.91
SLC3A1-205ENST00000409387 FAM3DQ96BQ1 224 aa9.36□□□□□ -0.91
SLC3A1-205ENST00000409387 AGPAT4-IT1Q9H0P7 198 aa9.36□□□□□ -0.91
SLC3A1-205ENST00000409387 P01737 135 aa9.35□□□□□ -0.91
SLC3A1-205ENST00000409387 OR5AL1P0C617 328 aa9.35□□□□□ -0.91
SLC3A1-205ENST00000409387 CFHR1Q03591 330 aa9.35□□□□□ -0.91
SLC3A1-205ENST00000409387 VMA21Q3ZAQ7 101 aa9.35□□□□□ -0.91
SLC3A1-205ENST00000409387 PRRG4Q9BZD6 226 aa9.35□□□□□ -0.91
SLC3A1-205ENST00000409387 PRDM14Q9GZV8 571 aa9.35□□□□□ -0.91
SLC3A1-205ENST00000409387 A0A087WWL8 130 aa9.34□□□□□ -0.91
SLC3A1-205ENST00000409387 TRAV8-2A0A0B4J237 113 aa9.34□□□□□ -0.91
SLC3A1-205ENST00000409387 TEX50A0A1B0GTY4 177 aa9.34□□□□□ -0.91
SLC3A1-205ENST00000409387 DEFB133Q30KQ1 61 aa9.34□□□□□ -0.91
SLC3A1-205ENST00000409387 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.34□□□□□ -0.91
SLC3A1-205ENST00000409387 LINC01545Q5VT33 79 aa9.34□□□□□ -0.91
SLC3A1-205ENST00000409387 SBSPONQ8IVN8 264 aa9.34□□□□□ -0.91
SLC3A1-205ENST00000409387 FOXQ1Q9C009 403 aa9.34□□□□□ -0.91
SLC3A1-205ENST00000409387 AP5S1Q9NUS5 200 aa9.34□□□□□ -0.91
SLC3A1-205ENST00000409387 HIGD1BQ9P298 99 aa9.34□□□□□ -0.91
SLC3A1-205ENST00000409387 FXYD2P54710 66 aa9.34□□□□□ -0.91
SLC3A1-205ENST00000409387 FAM120AOSQ5T036 256 aa9.34□□□□□ -0.91
SLC3A1-205ENST00000409387 TRAPPC6BQ86SZ2 158 aa9.34□□□□□ -0.91
SLC3A1-205ENST00000409387 BCL6BQ8N143 479 aaPredicted RBP9.34□□□□□ -0.91
SLC3A1-205ENST00000409387 FAM57AQ8TBR7 257 aa9.34□□□□□ -0.91
SLC3A1-205ENST00000409387 PRSS27Q9BQR3 290 aa9.34□□□□□ -0.91
SLC3A1-205ENST00000409387 SAP30LQ9HAJ7 183 aa9.34□□□□□ -0.91
SLC3A1-205ENST00000409387 CACNG5Q9UF02 275 aa9.34□□□□□ -0.91
SLC3A1-205ENST00000409387 CACNA1EQ15878 2313 aa9.34□□□□□ -0.91
SLC3A1-205ENST00000409387 TRAV8-1A0A0A6YYK1 113 aa9.33□□□□□ -0.92
SLC3A1-205ENST00000409387 LOXP28300 417 aaPredicted RBP9.33□□□□□ -0.92
SLC3A1-205ENST00000409387 PIFOQ8TCI5 191 aa9.33□□□□□ -0.92
SLC3A1-205ENST00000409387 DSCR8Q96T75 97 aa9.33□□□□□ -0.92
SLC3A1-205ENST00000409387 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.33□□□□□ -0.92
SLC3A1-205ENST00000409387 A8MWV9 139 aa9.33□□□□□ -0.92
SLC3A1-205ENST00000409387 K7ERJ3 54 aa9.33□□□□□ -0.92
SLC3A1-205ENST00000409387 LEPROTL1O95214 131 aa9.33□□□□□ -0.92
SLC3A1-205ENST00000409387 PI4KAP42356 2102 aa9.33□□□□□ -0.92
SLC3A1-205ENST00000409387 GFERP55789 205 aa9.33□□□□□ -0.92
SLC3A1-205ENST00000409387 MRPL55Q7Z7F7 128 aaKnown RBP9.33□□□□□ -0.92
SLC3A1-205ENST00000409387 PFN4Q8NHR9 129 aa9.33□□□□□ -0.92
SLC3A1-205ENST00000409387 NHP2Q9NX24 153 aaKnown RBP9.33□□□□□ -0.92
SLC3A1-205ENST00000409387 FOXS1O43638 330 aa9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 NDUFB4O95168 129 aa9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 LYPD3O95274 346 aa9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 AVPP01185 164 aa9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 IGKV1D-16P01601 117 aa9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 GATA1P15976 413 aaPredicted RBP9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 AMN1Q8IY45 258 aa9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 NPIPB3Q92617 1050 aa9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 ODF3Q96PU9 254 aa9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 SHANK2-AS3Q9BTD1 123 aa9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 ASCC3Q8N3C0 2202 aaKnown RBP9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 ADAMTS20P59510 1910 aa9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 TRAV2A0A0B4J234 112 aa9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 TRAV26-2A0A0B4J265 109 aa9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 IGHV5-51A0A0C4DH38 117 aa9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 ZGLP1P0C6A0 271 aa9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 HLA-DRB4P13762 266 aa9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 HLA-DMBP28068 263 aa9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 ZNF726P1Q15940 193 aa9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 NNATQ16517 81 aa9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 MMD2Q8IY49 270 aa9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 POM121L12Q8N7R1 296 aa9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 ZNF442Q9H7R0 627 aa9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 HHLA3Q9XRX5 114 aa9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 HLA-DRB4X5D2U9 266 aa9.32□□□□□ -0.92
SLC3A1-205ENST00000409387 PCNX3Q9H6A9 2034 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms