RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 LINC00173Q6ZV60 143 aa8.63□□□□□ -1.03
NIF3L1-204ENST00000409357 GALMQ96C23 342 aa8.63□□□□□ -1.03
NIF3L1-204ENST00000409357 ZNF503Q96F45 646 aa8.63□□□□□ -1.03
NIF3L1-204ENST00000409357 TP73-AS1Q9UF72 201 aa8.63□□□□□ -1.03
NIF3L1-204ENST00000409357 KLF12Q9Y4X4 402 aa8.63□□□□□ -1.03
NIF3L1-204ENST00000409357 NCKAP5O14513 1909 aa8.63□□□□□ -1.03
NIF3L1-204ENST00000409357 POLQO75417 2590 aa8.63□□□□□ -1.03
NIF3L1-204ENST00000409357 H0Y8G0 127 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 HSPB6O14558 160 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 C8orf88P0DMB2 117 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 HLA-DRB4P13762 266 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 FABP6P51161 128 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 DSCR4P56555 118 aaPredicted RBP8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 SSBP2P81877 361 aaPredicted RBP8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 MEF2CQ06413 473 aaPredicted RBP8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 AESQ08117 197 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 ZNF788Q6ZQV5 615 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 MIR17HGQ75NE6 70 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 GPR82Q96P67 336 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 PLEKHA3Q9HB20 300 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 HLA-DRB4X5D2U9 266 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 KIAA1549Q9HCM3 1950 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 MYO9AB2RTY4 2548 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 A0A1B0GW15 77 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 OOEPA6NGQ2 149 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 SRRM4A7MD48 611 aaKnown RBP8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 VWC2LB2RUY7 222 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 E9PLD3 99 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 THBDP07204 575 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 COL8A1P27658 744 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 KIR2DS2P43631 304 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 FOXA3P55318 350 aaPredicted RBP8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 GUSBP1Q15486 140 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 GFRALQ6UXV0 394 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 OR9G1Q8NH87 305 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 NABP2Q9BQ15 211 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 ZNF355PQ9NSJ1 428 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 CYSLTR1Q9Y271 337 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 CACNA1DQ01668 2161 aa8.62□□□□□ -1.03
NIF3L1-204ENST00000409357 PKDREJQ9NTG1 2253 aa8.61□□□□□ -1.03
NIF3L1-204ENST00000409357 A0A1W2PRD5 423 aa8.61□□□□□ -1.03
NIF3L1-204ENST00000409357 A0A1W2PRF3 423 aa8.61□□□□□ -1.03
NIF3L1-204ENST00000409357 A0A1W2PRM7 423 aa8.61□□□□□ -1.03
NIF3L1-204ENST00000409357 TMEM30CPA0ZSE6 113 aa8.61□□□□□ -1.03
NIF3L1-204ENST00000409357 PINLYPA6NC86 204 aa8.61□□□□□ -1.03
NIF3L1-204ENST00000409357 ZNF716A6NP11 495 aa8.61□□□□□ -1.03
NIF3L1-204ENST00000409357 RBMXL2O75526 392 aaKnown RBP8.61□□□□□ -1.03
NIF3L1-204ENST00000409357 IGFBP2P18065 325 aa8.61□□□□□ -1.03
NIF3L1-204ENST00000409357 GRNP28799 593 aaKnown RBP8.61□□□□□ -1.03
NIF3L1-204ENST00000409357 CEBPDP49716 269 aaPredicted RBP8.61□□□□□ -1.03
NIF3L1-204ENST00000409357 RPRMLQ8N4K4 120 aa8.61□□□□□ -1.03
NIF3L1-204ENST00000409357 OR10D3Q8NH80 312 aa8.61□□□□□ -1.03
NIF3L1-204ENST00000409357 PHLDA1Q8WV24 401 aaPredicted RBP8.61□□□□□ -1.03
NIF3L1-204ENST00000409357 SPAG8Q99932 426 aaPredicted RBP8.61□□□□□ -1.03
NIF3L1-204ENST00000409357 SLC25A33Q9BSK2 321 aa8.61□□□□□ -1.03
NIF3L1-204ENST00000409357 TM2D2Q9BX73 214 aa8.61□□□□□ -1.03
NIF3L1-204ENST00000409357 POLDIP2Q9Y2S7 368 aa8.61□□□□□ -1.03
NIF3L1-204ENST00000409357 MED12Q93074 2177 aa8.6□□□□□ -1.03
NIF3L1-204ENST00000409357 SH2D7A6NKC9 451 aaPredicted RBP8.6□□□□□ -1.03
NIF3L1-204ENST00000409357 MGST3O14880 152 aa8.6□□□□□ -1.03
NIF3L1-204ENST00000409357 OR2H2O95918 312 aa8.6□□□□□ -1.03
NIF3L1-204ENST00000409357 SSR4P51571 173 aa8.6□□□□□ -1.03
NIF3L1-204ENST00000409357 KLRD1Q13241 179 aa8.6□□□□□ -1.03
NIF3L1-204ENST00000409357 TAL2Q16559 108 aa8.6□□□□□ -1.03
NIF3L1-204ENST00000409357 TRAT1Q6PIZ9 186 aa8.6□□□□□ -1.03
NIF3L1-204ENST00000409357 RBPMS2Q6ZRY4 209 aaKnown RBP8.6□□□□□ -1.03
NIF3L1-204ENST00000409357 AAED1Q7RTV5 226 aa8.6□□□□□ -1.03
NIF3L1-204ENST00000409357 TMEM178AQ8NBL3 297 aa8.6□□□□□ -1.03
NIF3L1-204ENST00000409357 SSMEM1Q8WWF3 244 aa8.6□□□□□ -1.03
NIF3L1-204ENST00000409357 FAM110AQ9BQ89 295 aa8.6□□□□□ -1.03
NIF3L1-204ENST00000409357 MLST8Q9BVC4 326 aa8.6□□□□□ -1.03
NIF3L1-204ENST00000409357 RPP21Q9H633 154 aaKnown RBP8.6□□□□□ -1.03
NIF3L1-204ENST00000409357 ERG28Q9UKR5 140 aa8.6□□□□□ -1.03
NIF3L1-204ENST00000409357 AMMECR1Q9Y4X0 333 aaPredicted RBP8.6□□□□□ -1.03
NIF3L1-204ENST00000409357 CHCHD2Q9Y6H1 151 aaPredicted RBP8.6□□□□□ -1.03
NIF3L1-204ENST00000409357 C19orf71A6NCJ1 209 aa8.59□□□□□ -1.03
NIF3L1-204ENST00000409357 NPIPB6E9PJ23 425 aa8.59□□□□□ -1.03
NIF3L1-204ENST00000409357 IGHG4P01861 327 aa8.59□□□□□ -1.03
NIF3L1-204ENST00000409357 B4GALT1P15291 398 aa8.59□□□□□ -1.03
NIF3L1-204ENST00000409357 MEOX1P50221 254 aa8.59□□□□□ -1.03
NIF3L1-204ENST00000409357 FGFBP3Q8TAT2 258 aa8.59□□□□□ -1.03
NIF3L1-204ENST00000409357 COQ2Q96H96 371 aa8.59□□□□□ -1.03
NIF3L1-204ENST00000409357 AP5S1Q9NUS5 200 aa8.59□□□□□ -1.03
NIF3L1-204ENST00000409357 A0A0J9YW62 118 aa8.59□□□□□ -1.03
NIF3L1-204ENST00000409357 PEX7O00628 323 aa8.59□□□□□ -1.03
NIF3L1-204ENST00000409357 CA1P00915 261 aaPredicted RBP8.59□□□□□ -1.03
NIF3L1-204ENST00000409357 MYCNOSP40205 109 aa8.59□□□□□ -1.03
NIF3L1-204ENST00000409357 CAMPP49913 170 aa8.59□□□□□ -1.03
NIF3L1-204ENST00000409357 RPS16P62249 146 aaKnown RBP8.59□□□□□ -1.03
NIF3L1-204ENST00000409357 FAM167A-AS1Q96KT0 104 aa8.59□□□□□ -1.03
NIF3L1-204ENST00000409357 SSBP3Q9BWW4 388 aaPredicted RBP8.59□□□□□ -1.03
NIF3L1-204ENST00000409357 TCF19Q9Y242 345 aa8.59□□□□□ -1.03
NIF3L1-204ENST00000409357 FOXA2Q9Y261 457 aaPredicted RBP8.59□□□□□ -1.03
NIF3L1-204ENST00000409357 INSIG2Q9Y5U4 225 aa8.59□□□□□ -1.03
NIF3L1-204ENST00000409357 C12orf77C9JDV5 145 aa8.58□□□□□ -1.04
NIF3L1-204ENST00000409357 CCL3P10147 92 aa8.58□□□□□ -1.04
NIF3L1-204ENST00000409357 CA6P23280 308 aa8.58□□□□□ -1.04
NIF3L1-204ENST00000409357 ERVK-16P61578 105 aa8.58□□□□□ -1.04
NIF3L1-204ENST00000409357 HSPE1P61604 102 aaKnown RBP8.58□□□□□ -1.04
NIF3L1-204ENST00000409357 GAGE5Q13069 117 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms