RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 SIGLEC8Q9NYZ4 499 aa15.59■□□□□ 0.09
VSX1-203ENST00000409285 U3KQE9 123 aa15.59■□□□□ 0.09
VSX1-203ENST00000409285 C2orf70A6NJV1 201 aa15.58■□□□□ 0.08
VSX1-203ENST00000409285 S100A7P31151 101 aa15.58■□□□□ 0.08
VSX1-203ENST00000409285 S100A7AQ86SG5 101 aa15.58■□□□□ 0.08
VSX1-203ENST00000409285 WFDC9Q8NEX5 89 aa15.58■□□□□ 0.08
VSX1-203ENST00000409285 GATAD1Q8WUU5 269 aa15.58■□□□□ 0.08
VSX1-203ENST00000409285 TMEM37Q8WXS4 190 aa15.58■□□□□ 0.08
VSX1-203ENST00000409285 ST8SIA2Q92186 375 aa15.58■□□□□ 0.08
VSX1-203ENST00000409285 PBDC1Q9BVG4 233 aa15.58■□□□□ 0.08
VSX1-203ENST00000409285 SLC25A32Q9H2D1 315 aa15.58■□□□□ 0.08
VSX1-203ENST00000409285 IGHV3OR16-8A0A075B7F1 116 aa15.57■□□□□ 0.08
VSX1-203ENST00000409285 ORM2P19652 201 aa15.57■□□□□ 0.08
VSX1-203ENST00000409285 NPPCP23582 126 aa15.57■□□□□ 0.08
VSX1-203ENST00000409285 TM4SF20Q53R12 229 aa15.57■□□□□ 0.08
VSX1-203ENST00000409285 FFAR4Q5NUL3 377 aa15.57■□□□□ 0.08
VSX1-203ENST00000409285 EIF5AL1Q6IS14 154 aaKnown RBP15.57■□□□□ 0.08
VSX1-203ENST00000409285 PATE2Q6UY27 113 aa15.57■□□□□ 0.08
VSX1-203ENST00000409285 IL34Q6ZMJ4 242 aa15.57■□□□□ 0.08
VSX1-203ENST00000409285 OR1B1Q8NGR6 318 aa15.57■□□□□ 0.08
VSX1-203ENST00000409285 PFDN2Q9UHV9 154 aa15.57■□□□□ 0.08
VSX1-203ENST00000409285 RFNGQ9Y644 331 aa15.57■□□□□ 0.08
VSX1-203ENST00000409285 IGHV7-4-1A0A0J9YVY3 117 aa15.56■□□□□ 0.08
VSX1-203ENST00000409285 COX7A2P2O60397 106 aa15.56■□□□□ 0.08
VSX1-203ENST00000409285 MBP02144 154 aa15.56■□□□□ 0.08
VSX1-203ENST00000409285 PHYHIPLQ96FC7 376 aa15.56■□□□□ 0.08
VSX1-203ENST00000409285 DNAJC4Q9NNZ3 241 aa15.56■□□□□ 0.08
VSX1-203ENST00000409285 HIGD1AQ9Y241 93 aa15.56■□□□□ 0.08
VSX1-203ENST00000409285 OR5G3P0C626 314 aa15.55■□□□□ 0.08
VSX1-203ENST00000409285 M6PRP20645 277 aa15.55■□□□□ 0.08
VSX1-203ENST00000409285 CBLN1P23435 193 aa15.55■□□□□ 0.08
VSX1-203ENST00000409285 ACOT6Q3I5F7 207 aaPredicted RBP15.55■□□□□ 0.08
VSX1-203ENST00000409285 C10orf113Q5VZT2 155 aa15.55■□□□□ 0.08
VSX1-203ENST00000409285 RNF2Q99496 336 aa15.55■□□□□ 0.08
VSX1-203ENST00000409285 ELOVL1Q9BW60 279 aa15.55■□□□□ 0.08
VSX1-203ENST00000409285 VSIRQ9H7M9 311 aa15.55■□□□□ 0.08
VSX1-203ENST00000409285 DOK5Q9P104 306 aa15.55■□□□□ 0.08
VSX1-203ENST00000409285 SMPXQ9UHP9 88 aa15.55■□□□□ 0.08
VSX1-203ENST00000409285 RNF24Q9Y225 148 aa15.55■□□□□ 0.08
VSX1-203ENST00000409285 H3BRN7 92 aa15.54■□□□□ 0.08
VSX1-203ENST00000409285 BUB3O43684 328 aa15.54■□□□□ 0.08
VSX1-203ENST00000409285 CSN3P07498 182 aa15.54■□□□□ 0.08
VSX1-203ENST00000409285 FOLR2P14207 255 aa15.54■□□□□ 0.08
VSX1-203ENST00000409285 BMI1P35226 326 aa15.54■□□□□ 0.08
VSX1-203ENST00000409285 NARS2Q96I59 477 aaKnown RBP15.54■□□□□ 0.08
VSX1-203ENST00000409285 SHANK2-AS3Q9BTD1 123 aa15.54■□□□□ 0.08
VSX1-203ENST00000409285 SLC25A39Q9BZJ4 359 aaPredicted RBP15.54■□□□□ 0.08
VSX1-203ENST00000409285 A0A1W2PS18 150 aa15.53■□□□□ 0.08
VSX1-203ENST00000409285 UMAD1C9J7I0 102 aa15.53■□□□□ 0.08
VSX1-203ENST00000409285 ZNF207O43670 478 aaKnown RBP15.53■□□□□ 0.08
VSX1-203ENST00000409285 GCSAMLQ5JQS6 135 aa15.53■□□□□ 0.08
VSX1-203ENST00000409285 C1orf194Q5T5A4 169 aa15.53■□□□□ 0.08
VSX1-203ENST00000409285 ADAMTSL5Q6ZMM2 481 aa15.53■□□□□ 0.08
VSX1-203ENST00000409285 LINC00305Q7Z4B0 112 aa15.53■□□□□ 0.08
VSX1-203ENST00000409285 MRPL32Q9BYC8 188 aaKnown RBP15.53■□□□□ 0.08
VSX1-203ENST00000409285 TMEM41BQ5BJD5 291 aa15.52■□□□□ 0.08
VSX1-203ENST00000409285 PRR31Q5SQ13 230 aa15.52■□□□□ 0.08
VSX1-203ENST00000409285 TMED6Q8WW62 240 aa15.52■□□□□ 0.08
VSX1-203ENST00000409285 UHRF2Q96PU4 802 aa15.52■□□□□ 0.08
VSX1-203ENST00000409285 MCRIP2Q9BUT9 160 aaKnown RBP15.52■□□□□ 0.08
VSX1-203ENST00000409285 TMEM231Q9H6L2 316 aa15.52■□□□□ 0.08
VSX1-203ENST00000409285 TECRQ9NZ01 308 aaKnown RBP15.52■□□□□ 0.08
VSX1-203ENST00000409285 NOTCH3Q9UM47 2321 aa15.52■□□□□ 0.08
VSX1-203ENST00000409285 CHEK1O14757 476 aa15.52■□□□□ 0.07
VSX1-203ENST00000409285 APOHP02749 345 aaPredicted RBP15.52■□□□□ 0.07
VSX1-203ENST00000409285 CD33P20138 364 aa15.52■□□□□ 0.07
VSX1-203ENST00000409285 EDN2P20800 178 aa15.52■□□□□ 0.07
VSX1-203ENST00000409285 IFITM2Q01629 132 aa15.52■□□□□ 0.07
VSX1-203ENST00000409285 TEX261Q6UWH6 196 aa15.52■□□□□ 0.07
VSX1-203ENST00000409285 ZNF98A6NK75 572 aa15.51■□□□□ 0.07
VSX1-203ENST00000409285 SEC14L6B5MCN3 397 aa15.51■□□□□ 0.07
VSX1-203ENST00000409285 INSL3P51460 131 aa15.51■□□□□ 0.07
VSX1-203ENST00000409285 RAB2AP61019 212 aa15.51■□□□□ 0.07
VSX1-203ENST00000409285 RHOBP62745 196 aa15.51■□□□□ 0.07
VSX1-203ENST00000409285 AKR1C8PQ5T2L2 129 aa15.51■□□□□ 0.07
VSX1-203ENST00000409285 FAM78BQ5VT40 261 aa15.51■□□□□ 0.07
VSX1-203ENST00000409285 C16orf54Q6UWD8 224 aa15.51■□□□□ 0.07
VSX1-203ENST00000409285 OR10G4Q8NGN3 311 aa15.51■□□□□ 0.07
VSX1-203ENST00000409285 OR10G9Q8NGN4 311 aa15.51■□□□□ 0.07
VSX1-203ENST00000409285 OR10G7Q8NGN6 311 aa15.51■□□□□ 0.07
VSX1-203ENST00000409285 GRAMD2BQ96HH9 432 aa15.51■□□□□ 0.07
VSX1-203ENST00000409285 RHPN1-AS1Q9BWJ2 59 aa15.51■□□□□ 0.07
VSX1-203ENST00000409285 SEPSECSQ9HD40 501 aaKnown RBP15.51■□□□□ 0.07
VSX1-203ENST00000409285 RPRMQ9NS64 109 aa15.51■□□□□ 0.07
VSX1-203ENST00000409285 WIPF1O43516 503 aa15.5■□□□□ 0.07
VSX1-203ENST00000409285 CD5P06127 495 aa15.5■□□□□ 0.07
VSX1-203ENST00000409285 ALKAL2Q6UX46 152 aa15.5■□□□□ 0.07
VSX1-203ENST00000409285 DPPA3Q6W0C5 159 aa15.5■□□□□ 0.07
VSX1-203ENST00000409285 RPP25LQ8N5L8 163 aaKnown RBP15.5■□□□□ 0.07
VSX1-203ENST00000409285 GLMPQ8WWB7 406 aa15.5■□□□□ 0.07
VSX1-203ENST00000409285 SCRT1Q9BWW7 348 aa15.5■□□□□ 0.07
VSX1-203ENST00000409285 FUT9Q9Y231 359 aa15.5■□□□□ 0.07
VSX1-203ENST00000409285 IFNA7P01567 189 aa15.49■□□□□ 0.07
VSX1-203ENST00000409285 RAB5CP51148 216 aa15.49■□□□□ 0.07
VSX1-203ENST00000409285 ZNF680Q8NEM1 530 aa15.49■□□□□ 0.07
VSX1-203ENST00000409285 GPR82Q96P67 336 aa15.49■□□□□ 0.07
VSX1-203ENST00000409285 PLA2G2EQ9NZK7 142 aa15.49■□□□□ 0.07
VSX1-203ENST00000409285 MLXQ9UH92 298 aa15.49■□□□□ 0.07
VSX1-203ENST00000409285 IGHV3-49A0A0A0MS15 119 aa15.48■□□□□ 0.07
VSX1-203ENST00000409285 C9orf66Q5T8R8 295 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms