RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 GLMPQ8WWB7 406 aa10.64□□□□□ -0.71
RNF43-201ENST00000407977 FAM168AQ92567 244 aa10.64□□□□□ -0.71
RNF43-201ENST00000407977 SCRT1Q9BWW7 348 aa10.64□□□□□ -0.71
RNF43-201ENST00000407977 IGKV2-40A0A087WW87 121 aaPredicted RBP10.64□□□□□ -0.71
RNF43-201ENST00000407977 HAX1O00165 279 aa10.64□□□□□ -0.71
RNF43-201ENST00000407977 SH2D1AO60880 128 aa10.64□□□□□ -0.71
RNF43-201ENST00000407977 IGKV2D-40P01614 121 aaPredicted RBP10.64□□□□□ -0.71
RNF43-201ENST00000407977 SNHG12Q9BXW3 62 aa10.64□□□□□ -0.71
RNF43-201ENST00000407977 CMC4P56277 68 aaPredicted RBP10.64□□□□□ -0.71
RNF43-201ENST00000407977 LINC00158P58513 81 aa10.64□□□□□ -0.71
RNF43-201ENST00000407977 VWCEQ96DN2 955 aa10.64□□□□□ -0.71
RNF43-201ENST00000407977 PSPNO60542 156 aa10.64□□□□□ -0.71
RNF43-201ENST00000407977 IGHV1-46P01743 117 aa10.64□□□□□ -0.71
RNF43-201ENST00000407977 COLCA1Q6ZS62 124 aa10.64□□□□□ -0.71
RNF43-201ENST00000407977 NEGR1Q7Z3B1 354 aa10.64□□□□□ -0.71
RNF43-201ENST00000407977 RNASE6Q93091 150 aaKnown RBP10.64□□□□□ -0.71
RNF43-201ENST00000407977 SRSF8Q9BRL6 282 aaKnown RBP10.64□□□□□ -0.71
RNF43-201ENST00000407977 C7orf69Q9H7B7 122 aa10.64□□□□□ -0.71
RNF43-201ENST00000407977 MTCL1Q9Y4B5 1905 aaKnown RBP10.64□□□□□ -0.71
RNF43-201ENST00000407977 EFNA2O43921 213 aa10.63□□□□□ -0.71
RNF43-201ENST00000407977 PDE6HQ13956 83 aa10.63□□□□□ -0.71
RNF43-201ENST00000407977 TMEM158Q8WZ71 300 aa10.63□□□□□ -0.71
RNF43-201ENST00000407977 PRSS22Q9GZN4 317 aa10.63□□□□□ -0.71
RNF43-201ENST00000407977 ARID2Q68CP9 1835 aa10.63□□□□□ -0.71
RNF43-201ENST00000407977 SCN10AQ9Y5Y9 1956 aa10.63□□□□□ -0.71
RNF43-201ENST00000407977 DTX2Q86UW9 622 aa10.63□□□□□ -0.71
RNF43-201ENST00000407977 DTX1Q86Y01 620 aa10.63□□□□□ -0.71
RNF43-201ENST00000407977 MYMXA0A1B0GTQ4 84 aa10.62□□□□□ -0.71
RNF43-201ENST00000407977 IGHV2-5P01817 119 aa10.62□□□□□ -0.71
RNF43-201ENST00000407977 RFNGQ9Y644 331 aa10.62□□□□□ -0.71
RNF43-201ENST00000407977 DOCK4Q8N1I0 1966 aa10.62□□□□□ -0.71
RNF43-201ENST00000407977 LRRC37AA6NMS7 1700 aa10.62□□□□□ -0.71
RNF43-201ENST00000407977 MLNRO43193 412 aa10.62□□□□□ -0.71
RNF43-201ENST00000407977 GGNQ86UU5 652 aa10.62□□□□□ -0.71
RNF43-201ENST00000407977 ZNF329Q86UD4 541 aa10.62□□□□□ -0.71
RNF43-201ENST00000407977 KLF12Q9Y4X4 402 aa10.62□□□□□ -0.71
RNF43-201ENST00000407977 IGLC2P0DOY2 106 aa10.62□□□□□ -0.71
RNF43-201ENST00000407977 IGLC3P0DOY3 106 aa10.62□□□□□ -0.71
RNF43-201ENST00000407977 MINOS1Q5TGZ0 78 aa10.62□□□□□ -0.71
RNF43-201ENST00000407977 MINOS1-NBL1R4GNA1 71 aa10.62□□□□□ -0.71
RNF43-201ENST00000407977 COL4A5P29400 1685 aa10.62□□□□□ -0.71
RNF43-201ENST00000407977 IGHV2-26A0A0B4J1V2 119 aa10.62□□□□□ -0.71
RNF43-201ENST00000407977 TRGV4A0A0C4DH28 118 aa10.62□□□□□ -0.71
RNF43-201ENST00000407977 EPOPA6NHQ4 379 aa10.62□□□□□ -0.71
RNF43-201ENST00000407977 YPEL3P61236 119 aaPredicted RBP10.62□□□□□ -0.71
RNF43-201ENST00000407977 ZNF876PQ49A33 203 aa10.62□□□□□ -0.71
RNF43-201ENST00000407977 C10orf55Q5SWW7 151 aa10.62□□□□□ -0.71
RNF43-201ENST00000407977 Q6P435 159 aa10.62□□□□□ -0.71
RNF43-201ENST00000407977 Q86TA4 180 aa10.62□□□□□ -0.71
RNF43-201ENST00000407977 TAF1LQ8IZX4 1826 aa10.61□□□□□ -0.71
RNF43-201ENST00000407977 SCN2AQ99250 2005 aa10.61□□□□□ -0.71
RNF43-201ENST00000407977 C9JQL5 133 aa10.61□□□□□ -0.71
RNF43-201ENST00000407977 C18orf32Q8TCD1 76 aa10.61□□□□□ -0.71
RNF43-201ENST00000407977 THSD7AQ9UPZ6 1657 aa10.61□□□□□ -0.71
RNF43-201ENST00000407977 IGHV1-8P0DP01 117 aa10.61□□□□□ -0.71
RNF43-201ENST00000407977 HIST1H4AP62805 103 aaKnown RBP10.61□□□□□ -0.71
RNF43-201ENST00000407977 FOXL2NBQ6ZUU3 175 aa10.61□□□□□ -0.71
RNF43-201ENST00000407977 TDRD6O60522 2096 aaKnown RBP10.61□□□□□ -0.71
RNF43-201ENST00000407977 C9orf118A6NHY6 69 aa10.61□□□□□ -0.71
RNF43-201ENST00000407977 CFHR1Q03591 330 aa10.61□□□□□ -0.71
RNF43-201ENST00000407977 JPT2Q9H910 190 aa10.61□□□□□ -0.71
RNF43-201ENST00000407977 PATJQ8NI35 1801 aa10.61□□□□□ -0.71
RNF43-201ENST00000407977 H0YJW9 148 aa10.61□□□□□ -0.71
RNF43-201ENST00000407977 WNT2P09544 360 aa10.61□□□□□ -0.71
RNF43-201ENST00000407977 TRAV41A0A0B4J266 112 aa10.6□□□□□ -0.71
RNF43-201ENST00000407977 ZNF688P0C7X2 276 aa10.6□□□□□ -0.71
RNF43-201ENST00000407977 ANAPC10Q9UM13 185 aa10.6□□□□□ -0.71
RNF43-201ENST00000407977 IGHV3-64A0A075B6Q5 118 aa10.6□□□□□ -0.71
RNF43-201ENST00000407977 CD33P20138 364 aa10.6□□□□□ -0.71
RNF43-201ENST00000407977 RPL36AP83881 106 aaKnown RBP10.6□□□□□ -0.71
RNF43-201ENST00000407977 C15orf32Q32M92 178 aa10.6□□□□□ -0.71
RNF43-201ENST00000407977 RPL36ALQ969Q0 106 aaKnown RBP10.6□□□□□ -0.71
RNF43-201ENST00000407977 CHCHD5Q9BSY4 110 aa10.6□□□□□ -0.71
RNF43-201ENST00000407977 TRBV7-1A0A0A6YYK4 115 aa10.6□□□□□ -0.71
RNF43-201ENST00000407977 IGHV1-3A0A0C4DH29 117 aa10.6□□□□□ -0.71
RNF43-201ENST00000407977 F8W1H4 67 aa10.6□□□□□ -0.71
RNF43-201ENST00000407977 GATD1Q8NB37 220 aa10.6□□□□□ -0.71
RNF43-201ENST00000407977 RALGAPA2Q2PPJ7 1873 aa10.6□□□□□ -0.71
RNF43-201ENST00000407977 LINC00473A8K010 186 aa10.6□□□□□ -0.71
RNF43-201ENST00000407977 LEPROTO15243 131 aa10.6□□□□□ -0.71
RNF43-201ENST00000407977 RNASE2P10153 161 aaKnown RBP10.6□□□□□ -0.71
RNF43-201ENST00000407977 CSTL1Q9H114 145 aa10.6□□□□□ -0.71
RNF43-201ENST00000407977 PLSCR4Q9NRQ2 329 aa10.6□□□□□ -0.71
RNF43-201ENST00000407977 GREB1LQ9C091 1923 aaPredicted RBP10.6□□□□□ -0.71
RNF43-201ENST00000407977 TRAV3A0A0B4J244 114 aa10.59□□□□□ -0.71
RNF43-201ENST00000407977 INAFM2P0DMQ5 153 aa10.59□□□□□ -0.71
RNF43-201ENST00000407977 ZFP36L1Q07352 338 aaKnown RBP10.59□□□□□ -0.71
RNF43-201ENST00000407977 CSRP2Q16527 193 aa10.59□□□□□ -0.71
RNF43-201ENST00000407977 LY6G5BQ8NDX9 201 aa10.59□□□□□ -0.71
RNF43-201ENST00000407977 LIME1Q9H400 295 aa10.59□□□□□ -0.71
RNF43-201ENST00000407977 PAX4O43316 350 aa10.59□□□□□ -0.71
RNF43-201ENST00000407977 MAJINQ3KP22 176 aa10.59□□□□□ -0.71
RNF43-201ENST00000407977 C9JAW5 83 aa10.59□□□□□ -0.71
RNF43-201ENST00000407977 TFF1P04155 84 aa10.59□□□□□ -0.71
RNF43-201ENST00000407977 THBDP07204 575 aa10.59□□□□□ -0.71
RNF43-201ENST00000407977 CD177Q8N6Q3 437 aa10.59□□□□□ -0.71
RNF43-201ENST00000407977 BMPERQ8N8U9 685 aa10.59□□□□□ -0.71
RNF43-201ENST00000407977 PPDPFLQ8WWR9 84 aa10.59□□□□□ -0.71
RNF43-201ENST00000407977 TMEM200BQ69YZ2 307 aa10.59□□□□□ -0.71
RNF43-201ENST00000407977 AMN1Q8IY45 258 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms