RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 CCDC144NLQ6NUI1 221 aa4.84□□□□□ -1.64
HDAC9-203ENST00000406072 ZNF826PQ6ZT77 177 aa4.84□□□□□ -1.64
HDAC9-203ENST00000406072 MOB3BQ86TA1 216 aa4.84□□□□□ -1.64
HDAC9-203ENST00000406072 SHISA5Q8N114 240 aa4.84□□□□□ -1.64
HDAC9-203ENST00000406072 OR4C13Q8NGP0 309 aa4.84□□□□□ -1.64
HDAC9-203ENST00000406072 SPRY3O43610 288 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 SRD5A2P31213 254 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 RHOGP84095 191 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 DTX1Q86Y01 620 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 RPRMLQ8N4K4 120 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 ZIC4Q8N9L1 334 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 C1orf147Q96MC9 270 aaPredicted RBP4.83□□□□□ -1.64
HDAC9-203ENST00000406072 SCNM1Q9BWG6 230 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 SLC25A10Q9UBX3 287 aaPredicted RBP4.83□□□□□ -1.64
HDAC9-203ENST00000406072 NBASA2RRP1 2371 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 IGHV1-24A0A0C4DH33 117 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 hCG_38984A0A1B0GV85 526 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 C12orf77C9JDV5 145 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 MLNRO43193 412 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 COX6A1P12074 109 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 REG1BP48304 166 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 LEAP2Q969E1 77 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 RNF125Q96EQ8 232 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 SPAG8Q99932 426 aaPredicted RBP4.83□□□□□ -1.64
HDAC9-203ENST00000406072 EDA2RQ9HAV5 297 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 ANAPC10Q9UM13 185 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 ZNF815PA8K554 130 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 C8orf86Q6ZUL3 223 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 TEX45Q8NA69 505 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 RNF183Q96D59 192 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 SPXQ9BT56 116 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 C1QTNF4Q9BXJ3 329 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 LOXL2Q9Y4K0 774 aa4.83□□□□□ -1.64
HDAC9-203ENST00000406072 TRAV2A0A0B4J234 112 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 PRSS29PA6NIE9 313 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 ANOS1P23352 680 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 RPL39P5Q59GN2 51 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.82□□□□□ -1.64
HDAC9-203ENST00000406072 ZNF837Q96EG3 531 aaPredicted RBP4.82□□□□□ -1.64
HDAC9-203ENST00000406072 ZNF714Q96N38 554 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 SCGB3A1Q96QR1 104 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 MGST2Q99735 147 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 DEFB127Q9H1M4 99 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 CDH23Q9H251 3354 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 FER1L5A0AVI2 2057 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 USF3Q68DE3 2245 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 IGKV1-27A0A075B6S5 117 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 SAA2-SAA4A0A096LPE2 208 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 C9JAW5 83 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 D6R8Y8 96 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 NTF4P34130 210 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 OR9G1Q8NH87 305 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 JMJD8Q96S16 334 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 CXXC4Q9H2H0 198 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 DYNLRB1Q9NP97 96 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 PRB4P10163 310 aaPredicted RBP4.82□□□□□ -1.64
HDAC9-203ENST00000406072 NPPCP23582 126 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 IFI27P40305 119 aaPredicted RBP4.82□□□□□ -1.64
HDAC9-203ENST00000406072 ZNF146Q15072 292 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 LPAL2Q16609 132 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 PPP1R32Q7Z5V6 425 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 PPP1R27Q86WC6 154 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 IFI27L2Q9H2X8 130 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 NGBQ9NPG2 151 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 CNOT1A5YKK6 2376 aaKnown RBP4.82□□□□□ -1.64
HDAC9-203ENST00000406072 H0YJW9 148 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 CELA3BP08861 270 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 FRMD6-AS1P0C7T7 363 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 CCL3P10147 92 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 PRDX2P32119 198 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 MPV17P39210 176 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 PTGDSP41222 190 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 ASPHD1Q5U4P2 390 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 IGFL2Q6UWQ7 119 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 ABHD17AQ96GS6 310 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 FMC1Q96HJ9 113 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 SLC25A2Q9BXI2 301 aa4.82□□□□□ -1.64
HDAC9-203ENST00000406072 CACNA1BQ00975 2339 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 A0A1W2PNU3 283 aaPredicted RBP4.81□□□□□ -1.64
HDAC9-203ENST00000406072 C9orf172C9J069 976 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 CEACAM4O75871 244 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 APOBEC3AP31941 199 aaPredicted RBP4.81□□□□□ -1.64
HDAC9-203ENST00000406072 ZNF56Q15929 161 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 C10orf128Q5T292 105 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 Q6AWC8 147 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 LINC00173Q6ZV60 143 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 C3orf56Q8N813 242 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 C1orf162Q8NEQ5 155 aaPredicted RBP4.81□□□□□ -1.64
HDAC9-203ENST00000406072 TIMD4Q96H15 378 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 DECR2Q9NUI1 292 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 TP73-AS1Q9UF72 201 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 PKDREJQ9NTG1 2253 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 TRAV24A0A0B4J272 114 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 NPIPB5A8MRT5 1133 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 LYZL6O75951 148 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 NCR2O95944 276 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 TMPRSS3P57727 454 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 TRIP6Q15654 476 aaKnown RBP4.81□□□□□ -1.64
HDAC9-203ENST00000406072 ZNF562Q6V9R5 426 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 SLC25A48Q6ZT89 311 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms