RNA–Protein interactions for RNA: ENST00000405805.5

HMGB1-206, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HMGB1, Length 4,199 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-206ENST00000405805 TCF24Q7RTU0 167 aa9.81□□□□□ -0.84
HMGB1-206ENST00000405805 C19orf24Q9BVV8 132 aa9.81□□□□□ -0.84
HMGB1-206ENST00000405805 NUP210LQ5VU65 1888 aa9.81□□□□□ -0.84
HMGB1-206ENST00000405805 PIMREGQ9BSJ6 248 aa9.8□□□□□ -0.84
HMGB1-206ENST00000405805 C11orf1Q9H5F2 150 aa9.8□□□□□ -0.84
HMGB1-206ENST00000405805 INSIG2Q9Y5U4 225 aa9.8□□□□□ -0.84
HMGB1-206ENST00000405805 GFRA3O60609 400 aa9.8□□□□□ -0.84
HMGB1-206ENST00000405805 ZNF883P0CG24 379 aa9.8□□□□□ -0.84
HMGB1-206ENST00000405805 PRNTQ86SH4 94 aa9.8□□□□□ -0.84
HMGB1-206ENST00000405805 BCL6BQ8N143 479 aaPredicted RBP9.8□□□□□ -0.84
HMGB1-206ENST00000405805 SYT8Q8NBV8 401 aa9.8□□□□□ -0.84
HMGB1-206ENST00000405805 OR1L8Q8NGR8 309 aa9.8□□□□□ -0.84
HMGB1-206ENST00000405805 A8MWL6 223 aa9.8□□□□□ -0.84
HMGB1-206ENST00000405805 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.8□□□□□ -0.84
HMGB1-206ENST00000405805 AMTNQ6UX39 209 aa9.8□□□□□ -0.84
HMGB1-206ENST00000405805 SH2D6Q7Z4S9 175 aa9.8□□□□□ -0.84
HMGB1-206ENST00000405805 JPT1Q9UK76 154 aa9.8□□□□□ -0.84
HMGB1-206ENST00000405805 TANC2Q9HCD6 1990 aa9.8□□□□□ -0.84
HMGB1-206ENST00000405805 A0A1W2PRE2 83 aa9.79□□□□□ -0.84
HMGB1-206ENST00000405805 NDUFB3O43676 98 aa9.79□□□□□ -0.84
HMGB1-206ENST00000405805 IGLV2-14P01704 120 aa9.79□□□□□ -0.84
HMGB1-206ENST00000405805 APOHP02749 345 aaPredicted RBP9.79□□□□□ -0.84
HMGB1-206ENST00000405805 IGKV1-16P04430 117 aa9.79□□□□□ -0.84
HMGB1-206ENST00000405805 DLX1P56177 255 aa9.79□□□□□ -0.84
HMGB1-206ENST00000405805 FXYD7P58549 80 aa9.79□□□□□ -0.84
HMGB1-206ENST00000405805 KLRB1Q12918 225 aa9.79□□□□□ -0.84
HMGB1-206ENST00000405805 TSKUQ8WUA8 353 aa9.79□□□□□ -0.84
HMGB1-206ENST00000405805 ZNF414Q96IQ9 312 aa9.79□□□□□ -0.84
HMGB1-206ENST00000405805 TMEM160Q9NX00 188 aa9.79□□□□□ -0.84
HMGB1-206ENST00000405805 SLC25A10Q9UBX3 287 aaPredicted RBP9.79□□□□□ -0.84
HMGB1-206ENST00000405805 NAV3Q8IVL0 2385 aa9.79□□□□□ -0.84
HMGB1-206ENST00000405805 A0A1W2PNU3 283 aaPredicted RBP9.79□□□□□ -0.84
HMGB1-206ENST00000405805 BVES-AS1Q5T3Y7 98 aa9.79□□□□□ -0.84
HMGB1-206ENST00000405805 FAM222BQ8WU58 562 aa9.79□□□□□ -0.84
HMGB1-206ENST00000405805 TRBV20OR9-2A0A075B6H5 130 aa9.79□□□□□ -0.84
HMGB1-206ENST00000405805 IGHV3OR16-8A0A075B7F1 116 aa9.79□□□□□ -0.84
HMGB1-206ENST00000405805 NDUFB8O95169 186 aa9.79□□□□□ -0.84
HMGB1-206ENST00000405805 IGHV2-26A0A0B4J1V2 119 aa9.78□□□□□ -0.84
HMGB1-206ENST00000405805 IGLC7A0M8Q6 106 aa9.78□□□□□ -0.84
HMGB1-206ENST00000405805 ZNF134P52741 427 aa9.78□□□□□ -0.84
HMGB1-206ENST00000405805 DAZAP2Q15038 168 aaPredicted RBP9.78□□□□□ -0.84
HMGB1-206ENST00000405805 OR5AN1Q8NGI8 311 aa9.78□□□□□ -0.84
HMGB1-206ENST00000405805 ARPC1AQ92747 370 aa9.78□□□□□ -0.84
HMGB1-206ENST00000405805 TNRC6AQ8NDV7 1962 aaKnown RBP9.78□□□□□ -0.84
HMGB1-206ENST00000405805 TTC9CQ8N5M4 171 aa9.78□□□□□ -0.84
HMGB1-206ENST00000405805 PRO3102Q9H379 93 aa9.78□□□□□ -0.84
HMGB1-206ENST00000405805 TP73-AS1Q9UF72 201 aa9.78□□□□□ -0.84
HMGB1-206ENST00000405805 KIR2DS2P43631 304 aa9.78□□□□□ -0.84
HMGB1-206ENST00000405805 TMEM95Q3KNT9 176 aa9.78□□□□□ -0.84
HMGB1-206ENST00000405805 VMA21Q3ZAQ7 101 aa9.78□□□□□ -0.84
HMGB1-206ENST00000405805 IGKV1D-17A0A075B6S4 117 aa9.78□□□□□ -0.84
HMGB1-206ENST00000405805 TRBV6-6A0A0A6YYG2 114 aa9.78□□□□□ -0.84
HMGB1-206ENST00000405805 CACNG7P62955 275 aa9.78□□□□□ -0.84
HMGB1-206ENST00000405805 PRSS57Q6UWY2 283 aa9.78□□□□□ -0.84
HMGB1-206ENST00000405805 GCSAMQ8N6F7 178 aa9.78□□□□□ -0.84
HMGB1-206ENST00000405805 MRPL20Q9BYC9 149 aaKnown RBP9.78□□□□□ -0.84
HMGB1-206ENST00000405805 KLK15Q9H2R5 256 aa9.78□□□□□ -0.84
HMGB1-206ENST00000405805 DSPP15924 2871 aaKnown RBP9.77□□□□□ -0.84
HMGB1-206ENST00000405805 SAA1P0DJI8 122 aaPredicted RBP9.77□□□□□ -0.85
HMGB1-206ENST00000405805 ATP5G2Q06055 141 aa9.77□□□□□ -0.85
HMGB1-206ENST00000405805 FOXL1Q12952 345 aa9.77□□□□□ -0.85
HMGB1-206ENST00000405805 GAGE5Q13069 117 aa9.77□□□□□ -0.85
HMGB1-206ENST00000405805 GAGE6Q13070 117 aa9.77□□□□□ -0.85
HMGB1-206ENST00000405805 IGF2RP11717 2491 aa9.77□□□□□ -0.85
HMGB1-206ENST00000405805 HIGD1CA8MV81 97 aa9.77□□□□□ -0.85
HMGB1-206ENST00000405805 TNFRSF1AP19438 455 aa9.77□□□□□ -0.85
HMGB1-206ENST00000405805 LINC00305Q7Z4B0 112 aa9.77□□□□□ -0.85
HMGB1-206ENST00000405805 YPEL4Q96NS1 127 aa9.77□□□□□ -0.85
HMGB1-206ENST00000405805 TNFRSF19Q9NS68 423 aa9.77□□□□□ -0.85
HMGB1-206ENST00000405805 ANKHD1Q8IWZ3 2542 aaKnown RBP9.77□□□□□ -0.85
HMGB1-206ENST00000405805 IGHV1-18A0A0C4DH31 117 aa9.77□□□□□ -0.85
HMGB1-206ENST00000405805 KIR2DL2P43627 348 aaPredicted RBP9.77□□□□□ -0.85
HMGB1-206ENST00000405805 RCHY1Q96PM5 261 aa9.77□□□□□ -0.85
HMGB1-206ENST00000405805 PRR33A8MZF0 331 aa9.76□□□□□ -0.85
HMGB1-206ENST00000405805 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.76□□□□□ -0.85
HMGB1-206ENST00000405805 UTF1Q5T230 341 aa9.76□□□□□ -0.85
HMGB1-206ENST00000405805 C15orf61A6NNL5 157 aa9.76□□□□□ -0.85
HMGB1-206ENST00000405805 NCBP2LA6PVI3 153 aaKnown RBP9.76□□□□□ -0.85
HMGB1-206ENST00000405805 Q6ZSR3 168 aa9.76□□□□□ -0.85
HMGB1-206ENST00000405805 RPEQ96AT9 228 aa9.76□□□□□ -0.85
HMGB1-206ENST00000405805 TMEM189A5PLL7 270 aa9.76□□□□□ -0.85
HMGB1-206ENST00000405805 H3BMG7 143 aa9.76□□□□□ -0.85
HMGB1-206ENST00000405805 TMPRSS3P57727 454 aa9.76□□□□□ -0.85
HMGB1-206ENST00000405805 RIGQ13278 110 aa9.76□□□□□ -0.85
HMGB1-206ENST00000405805 SPRNQ5BIV9 151 aa9.76□□□□□ -0.85
HMGB1-206ENST00000405805 TXNDC17Q9BRA2 123 aa9.76□□□□□ -0.85
HMGB1-206ENST00000405805 IDI2-AS1Q9NZ38 188 aa9.76□□□□□ -0.85
HMGB1-206ENST00000405805 PRRG2O14669 202 aa9.75□□□□□ -0.85
HMGB1-206ENST00000405805 ERVK11-1P61568 191 aa9.75□□□□□ -0.85
HMGB1-206ENST00000405805 RPRMLQ8N4K4 120 aa9.75□□□□□ -0.85
HMGB1-206ENST00000405805 YAE1D1Q9NRH1 226 aa9.75□□□□□ -0.85
HMGB1-206ENST00000405805 GNB1LQ9BYB4 327 aa9.75□□□□□ -0.85
HMGB1-206ENST00000405805 IFI27L2Q9H2X8 130 aa9.75□□□□□ -0.85
HMGB1-206ENST00000405805 K7EP34 96 aa9.75□□□□□ -0.85
HMGB1-206ENST00000405805 MMP23AO75900 390 aa9.75□□□□□ -0.85
HMGB1-206ENST00000405805 OR10J3Q5JRS4 329 aa9.75□□□□□ -0.85
HMGB1-206ENST00000405805 GOLT1AQ6ZVE7 132 aa9.75□□□□□ -0.85
HMGB1-206ENST00000405805 FAM90A1Q86YD7 464 aa9.75□□□□□ -0.85
HMGB1-206ENST00000405805 C9orf118A6NHY6 69 aa9.74□□□□□ -0.85
HMGB1-206ENST00000405805 SYS1-DBNDD2H3BUS1 97 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms