RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 TYMSP04818 313 aa9.58□□□□□ -0.88
CLIP4-203ENST00000401617 CTSGP08311 255 aa9.58□□□□□ -0.88
CLIP4-203ENST00000401617 HIST1H1EP10412 219 aaKnown RBP9.58□□□□□ -0.88
CLIP4-203ENST00000401617 LEMD1Q68G75 181 aa9.58□□□□□ -0.88
CLIP4-203ENST00000401617 TMEM219Q86XT9 240 aa9.58□□□□□ -0.88
CLIP4-203ENST00000401617 LINC01356Q8N9X3 169 aa9.58□□□□□ -0.88
CLIP4-203ENST00000401617 NECAP1Q8NC96 275 aa9.58□□□□□ -0.88
CLIP4-203ENST00000401617 A6NDX4 124 aa9.58□□□□□ -0.88
CLIP4-203ENST00000401617 MRPS12O15235 138 aaKnown RBP9.58□□□□□ -0.88
CLIP4-203ENST00000401617 GCGP01275 180 aa9.58□□□□□ -0.88
CLIP4-203ENST00000401617 KRTAP10-9P60411 292 aa9.58□□□□□ -0.88
CLIP4-203ENST00000401617 RANP62826 216 aaKnown RBP9.58□□□□□ -0.88
CLIP4-203ENST00000401617 ZNF502Q8TBZ5 544 aa9.58□□□□□ -0.88
CLIP4-203ENST00000401617 TMEM190Q8WZ59 177 aa9.58□□□□□ -0.88
CLIP4-203ENST00000401617 ZNF414Q96IQ9 312 aa9.58□□□□□ -0.88
CLIP4-203ENST00000401617 BEX4Q9NWD9 120 aaPredicted RBP9.58□□□□□ -0.88
CLIP4-203ENST00000401617 EPDR1Q9UM22 224 aa9.58□□□□□ -0.88
CLIP4-203ENST00000401617 KLF12Q9Y4X4 402 aa9.58□□□□□ -0.88
CLIP4-203ENST00000401617 CR1P17927 2039 aa9.57□□□□□ -0.88
CLIP4-203ENST00000401617 TRGC2P03986 189 aa9.57□□□□□ -0.88
CLIP4-203ENST00000401617 IL4P05112 153 aa9.57□□□□□ -0.88
CLIP4-203ENST00000401617 SNRPEP62304 92 aaKnown RBP9.57□□□□□ -0.88
CLIP4-203ENST00000401617 LOXL1Q08397 574 aaPredicted RBP9.57□□□□□ -0.88
CLIP4-203ENST00000401617 USF2Q15853 346 aaPredicted RBP9.57□□□□□ -0.88
CLIP4-203ENST00000401617 ECSCRQ19T08 205 aa9.57□□□□□ -0.88
CLIP4-203ENST00000401617 Q56UQ5 140 aa9.57□□□□□ -0.88
CLIP4-203ENST00000401617 KCNIP4Q6PIL6 250 aa9.57□□□□□ -0.88
CLIP4-203ENST00000401617 BLNKQ8WV28 456 aa9.57□□□□□ -0.88
CLIP4-203ENST00000401617 ZNF586Q9NXT0 402 aa9.57□□□□□ -0.88
CLIP4-203ENST00000401617 SOX21Q9Y651 276 aaPredicted RBP9.57□□□□□ -0.88
CLIP4-203ENST00000401617 PGPA6NDG6 321 aa9.57□□□□□ -0.88
CLIP4-203ENST00000401617 SH2D7A6NKC9 451 aaPredicted RBP9.57□□□□□ -0.88
CLIP4-203ENST00000401617 G3V318 75 aa9.57□□□□□ -0.88
CLIP4-203ENST00000401617 UBE2CO00762 179 aa9.57□□□□□ -0.88
CLIP4-203ENST00000401617 POLQO75417 2590 aa9.57□□□□□ -0.88
CLIP4-203ENST00000401617 HNF1AP20823 631 aa9.57□□□□□ -0.88
CLIP4-203ENST00000401617 ADMP35318 185 aa9.57□□□□□ -0.88
CLIP4-203ENST00000401617 CNN1P51911 297 aaKnown RBP9.57□□□□□ -0.88
CLIP4-203ENST00000401617 LRRC75A-AS1Q8N1F1 130 aa9.57□□□□□ -0.88
CLIP4-203ENST00000401617 OSTCQ9NRP0 149 aa9.57□□□□□ -0.88
CLIP4-203ENST00000401617 RNF24Q9Y225 148 aa9.57□□□□□ -0.88
CLIP4-203ENST00000401617 J3QLI3 93 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 AP4M1O00189 453 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 S100A6P06703 90 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 IGLC2P0DOY2 106 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 COL8A1P27658 744 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 RHOGP84095 191 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 TMEM183BQ1AE95 376 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 C15orf32Q32M92 178 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 S100A7AQ86SG5 101 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 C5orf17Q8NAS9 161 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 BTF3L4Q96K17 158 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 LINC00479Q96M42 142 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 CHRDL1Q9BU40 450 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 Q9H3A6 140 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 OTORQ9NRC9 128 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 V9GYV3 84 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 TRAV9-1A0A075B6T8 112 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 A0A1W2PPQ1 181 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 OR2T8A6NH00 312 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 ZNF98A6NK75 572 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 ISLRO14498 428 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 HIST1H2BKO60814 126 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 SCGB2A1O75556 95 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 SLC25A5P05141 298 aaKnown RBP9.56□□□□□ -0.88
CLIP4-203ENST00000401617 HIST1H2BJP06899 126 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 SNRPCP09234 159 aaKnown RBP9.56□□□□□ -0.88
CLIP4-203ENST00000401617 HIST1H2BOP23527 126 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 HIST1H2BBP33778 126 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 HIST1H2BDP58876 126 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 HIST1H2BCP62807 126 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 OR5I1Q13606 314 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 HIST2H2BEQ16778 126 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.56□□□□□ -0.88
CLIP4-203ENST00000401617 BPIFA4PQ86YQ2 179 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 BCL6BQ8N143 479 aaPredicted RBP9.56□□□□□ -0.88
CLIP4-203ENST00000401617 HIST1H2BHQ93079 126 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 HIST1H2BNQ99877 126 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 HIST1H2BMQ99879 126 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 IL36BQ9NZH7 164 aa9.56□□□□□ -0.88
CLIP4-203ENST00000401617 PRRC2AP48634 2157 aaKnown RBP9.55□□□□□ -0.88
CLIP4-203ENST00000401617 PPP5D1E7EU14 171 aa9.55□□□□□ -0.88
CLIP4-203ENST00000401617 H3BUX3 64 aa9.55□□□□□ -0.88
CLIP4-203ENST00000401617 BRI3O95415 125 aa9.55□□□□□ -0.88
CLIP4-203ENST00000401617 IGHV3-23P01764 117 aa9.55□□□□□ -0.88
CLIP4-203ENST00000401617 IGF1P05019 195 aa9.55□□□□□ -0.88
CLIP4-203ENST00000401617 FAM3BP58499 235 aaPredicted RBP9.55□□□□□ -0.88
CLIP4-203ENST00000401617 DEFB113Q30KQ7 82 aa9.55□□□□□ -0.88
CLIP4-203ENST00000401617 FRZBQ92765 325 aa9.55□□□□□ -0.88
CLIP4-203ENST00000401617 ATP6V0BQ99437 205 aa9.55□□□□□ -0.88
CLIP4-203ENST00000401617 ATG101Q9BSB4 218 aa9.55□□□□□ -0.88
CLIP4-203ENST00000401617 GAR1Q9NY12 217 aaKnown RBP9.55□□□□□ -0.88
CLIP4-203ENST00000401617 MAP1AP78559 2803 aaPredicted RBP9.55□□□□□ -0.88
CLIP4-203ENST00000401617 CENPEQ02224 2701 aa9.54□□□□□ -0.88
CLIP4-203ENST00000401617 KMT2BQ9UMN6 2715 aaPredicted RBP9.54□□□□□ -0.88
CLIP4-203ENST00000401617 TRBV19A0A075B6N1 114 aa9.54□□□□□ -0.88
CLIP4-203ENST00000401617 TRAV41A0A0B4J266 112 aa9.54□□□□□ -0.88
CLIP4-203ENST00000401617 M0QZK8 103 aa9.54□□□□□ -0.88
CLIP4-203ENST00000401617 IGHG2P01859 326 aa9.54□□□□□ -0.88
CLIP4-203ENST00000401617 S100A9P06702 114 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms