RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 NPYP01303 97 aa7.95□□□□□ -1.14
SMAD9-203ENST00000399275 SPINK2P20155 84 aa7.95□□□□□ -1.14
SMAD9-203ENST00000399275 C12orf74Q32Q52 190 aa7.95□□□□□ -1.14
SMAD9-203ENST00000399275 LYZL4Q96KX0 146 aa7.95□□□□□ -1.14
SMAD9-203ENST00000399275 OTORQ9NRC9 128 aa7.95□□□□□ -1.14
SMAD9-203ENST00000399275 C1RLQ9NZP8 487 aa7.95□□□□□ -1.14
SMAD9-203ENST00000399275 JPT1Q9UK76 154 aa7.95□□□□□ -1.14
SMAD9-203ENST00000399275 RNF115Q9Y4L5 304 aa7.95□□□□□ -1.14
SMAD9-203ENST00000399275 CD3EP07766 207 aa7.95□□□□□ -1.14
SMAD9-203ENST00000399275 LINC00158P58513 81 aa7.95□□□□□ -1.14
SMAD9-203ENST00000399275 WFDC2Q14508 124 aa7.95□□□□□ -1.14
SMAD9-203ENST00000399275 SUMO4Q6EEV6 95 aa7.95□□□□□ -1.14
SMAD9-203ENST00000399275 TEN1Q86WV5 123 aa7.95□□□□□ -1.14
SMAD9-203ENST00000399275 BAALCQ8WXS3 180 aa7.95□□□□□ -1.14
SMAD9-203ENST00000399275 VPREB1P12018 145 aa7.95□□□□□ -1.14
SMAD9-203ENST00000399275 SPSB3Q6PJ21 355 aa7.95□□□□□ -1.14
SMAD9-203ENST00000399275 PPP1R32Q7Z5V6 425 aa7.95□□□□□ -1.14
SMAD9-203ENST00000399275 C18orf32Q8TCD1 76 aa7.95□□□□□ -1.14
SMAD9-203ENST00000399275 JPT2Q9H910 190 aa7.95□□□□□ -1.14
SMAD9-203ENST00000399275 HLA-DMBP28068 263 aa7.95□□□□□ -1.14
SMAD9-203ENST00000399275 NRN1LQ496H8 165 aa7.95□□□□□ -1.14
SMAD9-203ENST00000399275 TEX45Q8NA69 505 aa7.95□□□□□ -1.14
SMAD9-203ENST00000399275 Q9H3A6 140 aa7.95□□□□□ -1.14
SMAD9-203ENST00000399275 VSIRQ9H7M9 311 aa7.95□□□□□ -1.14
SMAD9-203ENST00000399275 PAX4O43316 350 aa7.94□□□□□ -1.14
SMAD9-203ENST00000399275 CCL11P51671 97 aa7.94□□□□□ -1.14
SMAD9-203ENST00000399275 ATP5J2P56134 94 aa7.94□□□□□ -1.14
SMAD9-203ENST00000399275 KLF5Q13887 457 aaPredicted RBP7.94□□□□□ -1.14
SMAD9-203ENST00000399275 ASCL5Q7RTU5 278 aa7.94□□□□□ -1.14
SMAD9-203ENST00000399275 FSCN3Q9NQT6 498 aa7.94□□□□□ -1.14
SMAD9-203ENST00000399275 TRAV40A0A0B4J280 105 aa7.94□□□□□ -1.14
SMAD9-203ENST00000399275 ATP5G1P05496 136 aa7.94□□□□□ -1.14
SMAD9-203ENST00000399275 CD28P10747 220 aa7.94□□□□□ -1.14
SMAD9-203ENST00000399275 RRN3P1Q2M238 152 aa7.94□□□□□ -1.14
SMAD9-203ENST00000399275 LY96Q9Y6Y9 160 aa7.94□□□□□ -1.14
SMAD9-203ENST00000399275 TRAV17A0A0B4J275 112 aa7.94□□□□□ -1.14
SMAD9-203ENST00000399275 LINC00271P0C7V0 271 aa7.94□□□□□ -1.14
SMAD9-203ENST00000399275 FOXI2Q6ZQN5 318 aa7.94□□□□□ -1.14
SMAD9-203ENST00000399275 SMIM9A6NGZ8 99 aa7.94□□□□□ -1.14
SMAD9-203ENST00000399275 LEPROTO15243 131 aa7.94□□□□□ -1.14
SMAD9-203ENST00000399275 PPIHO43447 177 aaKnown RBP7.94□□□□□ -1.14
SMAD9-203ENST00000399275 UQCRQO14949 82 aa7.93□□□□□ -1.14
SMAD9-203ENST00000399275 SEC61GP60059 68 aa7.93□□□□□ -1.14
SMAD9-203ENST00000399275 NMSQ5H8A3 153 aa7.93□□□□□ -1.14
SMAD9-203ENST00000399275 IGHV1-45A0A0A0MS14 117 aa7.93□□□□□ -1.14
SMAD9-203ENST00000399275 IGKV1D-13A0A0B4J2D9 117 aa7.93□□□□□ -1.14
SMAD9-203ENST00000399275 IGKV1-13P0DP09 117 aa7.93□□□□□ -1.14
SMAD9-203ENST00000399275 WFDC11Q8NEX6 87 aa7.93□□□□□ -1.14
SMAD9-203ENST00000399275 FAM57AQ8TBR7 257 aa7.93□□□□□ -1.14
SMAD9-203ENST00000399275 HEATR1Q9H583 2144 aaKnown RBP7.93□□□□□ -1.14
SMAD9-203ENST00000399275 LPAL2Q16609 132 aa7.93□□□□□ -1.14
SMAD9-203ENST00000399275 PRR31Q5SQ13 230 aa7.93□□□□□ -1.14
SMAD9-203ENST00000399275 WFDC9Q8NEX5 89 aa7.93□□□□□ -1.14
SMAD9-203ENST00000399275 WDR81Q562E7 1941 aa7.93□□□□□ -1.14
SMAD9-203ENST00000399275 IGHV5-10-1A0A0J9YXX1 117 aa7.93□□□□□ -1.14
SMAD9-203ENST00000399275 REG1BP48304 166 aa7.93□□□□□ -1.14
SMAD9-203ENST00000399275 TMEM30BQ3MIR4 351 aa7.93□□□□□ -1.14
SMAD9-203ENST00000399275 SRXN1Q9BYN0 137 aa7.93□□□□□ -1.14
SMAD9-203ENST00000399275 DEPPQ9NTK1 212 aa7.93□□□□□ -1.14
SMAD9-203ENST00000399275 RNF7Q9UBF6 113 aa7.93□□□□□ -1.14
SMAD9-203ENST00000399275 MYMXA0A1B0GTQ4 84 aa7.93□□□□□ -1.14
SMAD9-203ENST00000399275 FAM90A27PA6NNH2 459 aa7.93□□□□□ -1.14
SMAD9-203ENST00000399275 TAX1BP3O14907 124 aa7.93□□□□□ -1.14
SMAD9-203ENST00000399275 REG1AP05451 166 aa7.93□□□□□ -1.14
SMAD9-203ENST00000399275 MPLKIPQ8TAP9 179 aa7.93□□□□□ -1.14
SMAD9-203ENST00000399275 IFNL4K9M1U5 179 aa7.92□□□□□ -1.14
SMAD9-203ENST00000399275 WNT9BO14905 357 aa7.92□□□□□ -1.14
SMAD9-203ENST00000399275 SPINK14Q6IE38 97 aa7.92□□□□□ -1.14
SMAD9-203ENST00000399275 TMEM158Q8WZ71 300 aa7.92□□□□□ -1.14
SMAD9-203ENST00000399275 IGHG2P01859 326 aa7.92□□□□□ -1.14
SMAD9-203ENST00000399275 PRB3Q04118 309 aaPredicted RBP7.92□□□□□ -1.14
SMAD9-203ENST00000399275 TMEM171Q8WVE6 324 aa7.92□□□□□ -1.14
SMAD9-203ENST00000399275 IFI27L2Q9H2X8 130 aa7.92□□□□□ -1.14
SMAD9-203ENST00000399275 TIAF1O95411 115 aa7.92□□□□□ -1.14
SMAD9-203ENST00000399275 MPV17P39210 176 aa7.92□□□□□ -1.14
SMAD9-203ENST00000399275 CSRP2Q16527 193 aa7.92□□□□□ -1.14
SMAD9-203ENST00000399275 MORN2Q502X0 79 aa7.92□□□□□ -1.14
SMAD9-203ENST00000399275 A0A1W2PR77 199 aa7.92□□□□□ -1.14
SMAD9-203ENST00000399275 NDUFC2-KCTD14E9PQ53 114 aa7.92□□□□□ -1.14
SMAD9-203ENST00000399275 IGHV3-48P01763 117 aa7.92□□□□□ -1.14
SMAD9-203ENST00000399275 CXCL5P42830 114 aa7.92□□□□□ -1.14
SMAD9-203ENST00000399275 Q6ZUT4 128 aa7.92□□□□□ -1.14
SMAD9-203ENST00000399275 CFHR5Q9BXR6 569 aa7.92□□□□□ -1.14
SMAD9-203ENST00000399275 ZNF576Q9H609 170 aa7.92□□□□□ -1.14
SMAD9-203ENST00000399275 LINC00527Q9UJ94 153 aa7.92□□□□□ -1.14
SMAD9-203ENST00000399275 RPUSD1Q9UJJ7 312 aaKnown RBP7.92□□□□□ -1.14
SMAD9-203ENST00000399275 F2Z2F3 143 aa7.91□□□□□ -1.14
SMAD9-203ENST00000399275 HERVK_113P63121 156 aa7.91□□□□□ -1.14
SMAD9-203ENST00000399275 Q71RC1 249 aaPredicted RBP7.91□□□□□ -1.14
SMAD9-203ENST00000399275 SCN8AQ9UQD0 1980 aa7.91□□□□□ -1.14
SMAD9-203ENST00000399275 FAM90A1Q86YD7 464 aa7.91□□□□□ -1.14
SMAD9-203ENST00000399275 TPRP12270 2363 aaKnown RBP7.91□□□□□ -1.14
SMAD9-203ENST00000399275 MTCL1Q9Y4B5 1905 aaKnown RBP7.91□□□□□ -1.14
SMAD9-203ENST00000399275 IGLV3-32A0A0A0MS00 114 aa7.91□□□□□ -1.14
SMAD9-203ENST00000399275 FAM90A9PA6NNJ1 464 aa7.91□□□□□ -1.14
SMAD9-203ENST00000399275 PRR33A8MZF0 331 aa7.91□□□□□ -1.14
SMAD9-203ENST00000399275 IGLL5B9A064 214 aa7.91□□□□□ -1.14
SMAD9-203ENST00000399275 EFEMP2O95967 443 aa7.91□□□□□ -1.14
SMAD9-203ENST00000399275 WDR83OSQ9Y284 106 aa7.91□□□□□ -1.14
SMAD9-203ENST00000399275 A0A0B4J2C4 111 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms