RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 METRNQ9UJH8 293 aa7.1□□□□□ -1.27
CTNND1-205ENST00000399050 ANAPC10Q9UM13 185 aa7.1□□□□□ -1.27
CTNND1-205ENST00000399050 ZNF726P1Q15940 193 aa7.1□□□□□ -1.27
CTNND1-205ENST00000399050 CD177Q8N6Q3 437 aa7.1□□□□□ -1.27
CTNND1-205ENST00000399050 SPRR3Q9UBC9 169 aa7.1□□□□□ -1.27
CTNND1-205ENST00000399050 MLNRO43193 412 aa7.09□□□□□ -1.27
CTNND1-205ENST00000399050 SPINK8P0C7L1 97 aa7.09□□□□□ -1.27
CTNND1-205ENST00000399050 CD24P25063 80 aa7.09□□□□□ -1.27
CTNND1-205ENST00000399050 PLNP26678 52 aa7.09□□□□□ -1.27
CTNND1-205ENST00000399050 CHAC1Q9BUX1 264 aa7.09□□□□□ -1.27
CTNND1-205ENST00000399050 GFRA3O60609 400 aa7.09□□□□□ -1.27
CTNND1-205ENST00000399050 M0R2P5 195 aa7.09□□□□□ -1.27
CTNND1-205ENST00000399050 CDPF1Q6NVV7 123 aa7.09□□□□□ -1.27
CTNND1-205ENST00000399050 TRGV9Q99603 122 aa7.09□□□□□ -1.27
CTNND1-205ENST00000399050 DOCK6Q96HP0 2047 aa7.09□□□□□ -1.27
CTNND1-205ENST00000399050 SMKR1H3BMG3 65 aa7.09□□□□□ -1.27
CTNND1-205ENST00000399050 SSBP2P81877 361 aaPredicted RBP7.09□□□□□ -1.27
CTNND1-205ENST00000399050 IGLC2P0DOY2 106 aa7.09□□□□□ -1.28
CTNND1-205ENST00000399050 IGLC3P0DOY3 106 aa7.09□□□□□ -1.28
CTNND1-205ENST00000399050 CD28P10747 220 aa7.09□□□□□ -1.28
CTNND1-205ENST00000399050 PDLIM4P50479 330 aa7.09□□□□□ -1.28
CTNND1-205ENST00000399050 NPC2P61916 151 aa7.09□□□□□ -1.28
CTNND1-205ENST00000399050 ATXN8Q156A1 80 aa7.09□□□□□ -1.28
CTNND1-205ENST00000399050 MBNL3Q9NUK0 354 aaKnown RBP7.09□□□□□ -1.28
CTNND1-205ENST00000399050 MGAMO43451 1857 aa7.08□□□□□ -1.28
CTNND1-205ENST00000399050 STPG4Q8N801 248 aa7.08□□□□□ -1.28
CTNND1-205ENST00000399050 C18orf32Q8TCD1 76 aa7.08□□□□□ -1.28
CTNND1-205ENST00000399050 LINC00479Q96M42 142 aa7.08□□□□□ -1.28
CTNND1-205ENST00000399050 TOMM40O96008 361 aa7.08□□□□□ -1.28
CTNND1-205ENST00000399050 PAX9P55771 341 aa7.08□□□□□ -1.28
CTNND1-205ENST00000399050 TMEM158Q8WZ71 300 aa7.08□□□□□ -1.28
CTNND1-205ENST00000399050 SLC25A15Q9Y619 301 aa7.08□□□□□ -1.28
CTNND1-205ENST00000399050 TRAV8-1A0A0A6YYK1 113 aa7.08□□□□□ -1.28
CTNND1-205ENST00000399050 SELLP14151 372 aa7.08□□□□□ -1.28
CTNND1-205ENST00000399050 CFHR1Q03591 330 aa7.08□□□□□ -1.28
CTNND1-205ENST00000399050 SRSF6Q13247 344 aaKnown RBP7.08□□□□□ -1.28
CTNND1-205ENST00000399050 ASCL4Q6XD76 172 aa7.08□□□□□ -1.28
CTNND1-205ENST00000399050 CENPVQ7Z7K6 275 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-205ENST00000399050 CYYR1Q96J86 154 aa7.08□□□□□ -1.28
CTNND1-205ENST00000399050 LIME1Q9H400 295 aa7.08□□□□□ -1.28
CTNND1-205ENST00000399050 RPL15P61313 204 aaKnown RBP7.08□□□□□ -1.28
CTNND1-205ENST00000399050 CRIPAKQ8N1N5 446 aa7.08□□□□□ -1.28
CTNND1-205ENST00000399050 NPFFR1Q9GZQ6 430 aa7.08□□□□□ -1.28
CTNND1-205ENST00000399050 DPH3P1Q9H4G8 78 aa7.08□□□□□ -1.28
CTNND1-205ENST00000399050 SCN5AQ14524 2016 aa7.07□□□□□ -1.28
CTNND1-205ENST00000399050 IGHV3-11P01762 117 aa7.07□□□□□ -1.28
CTNND1-205ENST00000399050 C1orf122Q6ZSJ8 110 aa7.07□□□□□ -1.28
CTNND1-205ENST00000399050 ZCCHC24Q8N2G6 241 aaKnown RBP7.07□□□□□ -1.28
CTNND1-205ENST00000399050 LINC01587Q99440 93 aa7.07□□□□□ -1.28
CTNND1-205ENST00000399050 RSPO3Q9BXY4 272 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-205ENST00000399050 AMN1Q8IY45 258 aa7.07□□□□□ -1.28
CTNND1-205ENST00000399050 DEFB104AQ8WTQ1 72 aa7.07□□□□□ -1.28
CTNND1-205ENST00000399050 GFRA4Q9GZZ7 299 aa7.07□□□□□ -1.28
CTNND1-205ENST00000399050 VWA8A3KMH1 1905 aa7.07□□□□□ -1.28
CTNND1-205ENST00000399050 C9orf118A6NHY6 69 aa7.07□□□□□ -1.28
CTNND1-205ENST00000399050 IGHV1-46P01743 117 aa7.07□□□□□ -1.28
CTNND1-205ENST00000399050 RHOGP84095 191 aa7.07□□□□□ -1.28
CTNND1-205ENST00000399050 RPUSD1Q9UJJ7 312 aaKnown RBP7.07□□□□□ -1.28
CTNND1-205ENST00000399050 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-205ENST00000399050 TMEM238C9JI98 176 aa7.07□□□□□ -1.28
CTNND1-205ENST00000399050 ARTNQ5T4W7 220 aa7.07□□□□□ -1.28
CTNND1-205ENST00000399050 LCNL1Q6ZST4 164 aa7.07□□□□□ -1.28
CTNND1-205ENST00000399050 TMEM190Q8WZ59 177 aa7.07□□□□□ -1.28
CTNND1-205ENST00000399050 TIMM23O14925 209 aa7.07□□□□□ -1.28
CTNND1-205ENST00000399050 MLANAQ16655 118 aa7.07□□□□□ -1.28
CTNND1-205ENST00000399050 TMEM200BQ69YZ2 307 aa7.07□□□□□ -1.28
CTNND1-205ENST00000399050 ITLN2Q8WWU7 325 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-205ENST00000399050 IGKV1-6A0A0C4DH72 117 aa7.06□□□□□ -1.28
CTNND1-205ENST00000399050 SRRM5B3KS81 715 aa7.06□□□□□ -1.28
CTNND1-205ENST00000399050 SP9P0CG40 484 aa7.06□□□□□ -1.28
CTNND1-205ENST00000399050 SIGLEC15Q6ZMC9 328 aa7.06□□□□□ -1.28
CTNND1-205ENST00000399050 WFDC12Q8WWY7 111 aa7.06□□□□□ -1.28
CTNND1-205ENST00000399050 FNDC10F2Z333 226 aa7.06□□□□□ -1.28
CTNND1-205ENST00000399050 H0YJW9 148 aa7.06□□□□□ -1.28
CTNND1-205ENST00000399050 PLXND1Q9Y4D7 1925 aa7.06□□□□□ -1.28
CTNND1-205ENST00000399050 TNFRSF6BO95407 300 aa7.06□□□□□ -1.28
CTNND1-205ENST00000399050 ZC2HC1BQ5TFG8 222 aa7.06□□□□□ -1.28
CTNND1-205ENST00000399050 C2orf82Q6UX34 121 aa7.06□□□□□ -1.28
CTNND1-205ENST00000399050 Q86TA4 180 aa7.06□□□□□ -1.28
CTNND1-205ENST00000399050 Q8TAT8 98 aa7.06□□□□□ -1.28
CTNND1-205ENST00000399050 FAM57AQ8TBR7 257 aa7.06□□□□□ -1.28
CTNND1-205ENST00000399050 HS3ST6Q96QI5 342 aa7.06□□□□□ -1.28
CTNND1-205ENST00000399050 KLF2Q9Y5W3 355 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-205ENST00000399050 FOXL2NBQ6ZUU3 175 aa7.06□□□□□ -1.28
CTNND1-205ENST00000399050 CITED1Q99966 193 aa7.06□□□□□ -1.28
CTNND1-205ENST00000399050 ARHGEF17Q96PE2 2063 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-205ENST00000399050 A0A0U1RRA0 63 aa7.05□□□□□ -1.28
CTNND1-205ENST00000399050 PRR19A6NJB7 356 aa7.05□□□□□ -1.28
CTNND1-205ENST00000399050 A0A1B0GWJ7 208 aa7.05□□□□□ -1.28
CTNND1-205ENST00000399050 RNASE2P10153 161 aaKnown RBP7.05□□□□□ -1.28
CTNND1-205ENST00000399050 YPEL3P61236 119 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-205ENST00000399050 NEU4Q8WWR8 484 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-205ENST00000399050 V9GYV3 84 aa7.05□□□□□ -1.28
CTNND1-205ENST00000399050 LRRK1Q38SD2 2015 aa7.05□□□□□ -1.28
CTNND1-205ENST00000399050 TEX43Q6ZNM6 134 aa7.05□□□□□ -1.28
CTNND1-205ENST00000399050 TMEM167AQ8TBQ9 72 aa7.05□□□□□ -1.28
CTNND1-205ENST00000399050 CCL19Q99731 98 aa7.05□□□□□ -1.28
CTNND1-205ENST00000399050 EDA2RQ9HAV5 297 aa7.05□□□□□ -1.28
CTNND1-205ENST00000399050 IGHV2-26A0A0B4J1V2 119 aa7.05□□□□□ -1.28
CTNND1-205ENST00000399050 IGHV1-24A0A0C4DH33 117 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms