RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 USF2Q15853 346 aaPredicted RBP18.08■□□□□ 0.49
TSPAN4-202ENST00000397396 FAM74A1Q5RGS3 127 aa18.08■□□□□ 0.49
TSPAN4-202ENST00000397396 FAM213BQ8TBF2 198 aa18.08■□□□□ 0.49
TSPAN4-202ENST00000397396 SAT2Q96F10 170 aaPredicted RBP18.08■□□□□ 0.49
TSPAN4-202ENST00000397396 VSIRQ9H7M9 311 aa18.08■□□□□ 0.49
TSPAN4-202ENST00000397396 K7EMT4 169 aa18.07■□□□□ 0.48
TSPAN4-202ENST00000397396 CCL24O00175 119 aa18.07■□□□□ 0.48
TSPAN4-202ENST00000397396 BMI1P35226 326 aa18.07■□□□□ 0.48
TSPAN4-202ENST00000397396 TAS2R45P59539 299 aa18.07■□□□□ 0.48
TSPAN4-202ENST00000397396 RAB14P61106 215 aa18.07■□□□□ 0.48
TSPAN4-202ENST00000397396 DEFB136Q30KP8 78 aa18.07■□□□□ 0.48
TSPAN4-202ENST00000397396 GCSAMLQ5JQS6 135 aa18.07■□□□□ 0.48
TSPAN4-202ENST00000397396 FAM78BQ5VT40 261 aa18.07■□□□□ 0.48
TSPAN4-202ENST00000397396 FAM122CQ6P4D5 195 aa18.07■□□□□ 0.48
TSPAN4-202ENST00000397396 TMEM37Q8WXS4 190 aa18.07■□□□□ 0.48
TSPAN4-202ENST00000397396 RCC1LQ96I51 464 aaKnown RBP18.07■□□□□ 0.48
TSPAN4-202ENST00000397396 C20orf24Q9BUV8 137 aa18.07■□□□□ 0.48
TSPAN4-202ENST00000397396 DAZ1Q9NQZ3 744 aaKnown RBP18.07■□□□□ 0.48
TSPAN4-202ENST00000397396 FUT9Q9Y231 359 aa18.07■□□□□ 0.48
TSPAN4-202ENST00000397396 CTXND1A0A1B0GTU2 59 aa18.06■□□□□ 0.48
TSPAN4-202ENST00000397396 ZNF320A2RRD8 509 aa18.06■□□□□ 0.48
TSPAN4-202ENST00000397396 ZNF705EA8MWA4 302 aaPredicted RBP18.06■□□□□ 0.48
TSPAN4-202ENST00000397396 TEX46H3BTG2 121 aa18.06■□□□□ 0.48
TSPAN4-202ENST00000397396 MYCNOSP40205 109 aa18.06■□□□□ 0.48
TSPAN4-202ENST00000397396 NSUN5P1Q3KNT7 163 aa18.06■□□□□ 0.48
TSPAN4-202ENST00000397396 C12orf54Q6X4T0 127 aa18.06■□□□□ 0.48
TSPAN4-202ENST00000397396 LINC00305Q7Z4B0 112 aa18.06■□□□□ 0.48
TSPAN4-202ENST00000397396 RPP25LQ8N5L8 163 aaKnown RBP18.06■□□□□ 0.48
TSPAN4-202ENST00000397396 ZNF414Q96IQ9 312 aa18.06■□□□□ 0.48
TSPAN4-202ENST00000397396 RAX2Q96IS3 184 aa18.06■□□□□ 0.48
TSPAN4-202ENST00000397396 ZNF747Q9BV97 191 aa18.06■□□□□ 0.48
TSPAN4-202ENST00000397396 ADARB2-AS1A8MUL3 147 aa18.05■□□□□ 0.48
TSPAN4-202ENST00000397396 A8MWP6 167 aa18.05■□□□□ 0.48
TSPAN4-202ENST00000397396 NPPCP23582 126 aa18.05■□□□□ 0.48
TSPAN4-202ENST00000397396 PATE2Q6UY27 113 aa18.05■□□□□ 0.48
TSPAN4-202ENST00000397396 PLA2G2EQ9NZK7 142 aa18.05■□□□□ 0.48
TSPAN4-202ENST00000397396 PEMTQ9UBM1 199 aa18.05■□□□□ 0.48
TSPAN4-202ENST00000397396 KLF5Q13887 457 aaPredicted RBP18.04■□□□□ 0.48
TSPAN4-202ENST00000397396 OR4F17Q8NGA8 305 aa18.04■□□□□ 0.48
TSPAN4-202ENST00000397396 OR4F4Q96R69 305 aa18.04■□□□□ 0.48
TSPAN4-202ENST00000397396 SHANK2-AS3Q9BTD1 123 aa18.04■□□□□ 0.48
TSPAN4-202ENST00000397396 SLC25A39Q9BZJ4 359 aaPredicted RBP18.04■□□□□ 0.48
TSPAN4-202ENST00000397396 SLC25A22Q9H936 323 aa18.04■□□□□ 0.48
TSPAN4-202ENST00000397396 A0A1W2PS18 150 aa18.03■□□□□ 0.48
TSPAN4-202ENST00000397396 H3BRN7 92 aa18.03■□□□□ 0.48
TSPAN4-202ENST00000397396 HBE1P02100 147 aa18.03■□□□□ 0.48
TSPAN4-202ENST00000397396 CRYBB3P26998 211 aa18.03■□□□□ 0.48
TSPAN4-202ENST00000397396 KHDC3LQ587J8 217 aa18.03■□□□□ 0.48
TSPAN4-202ENST00000397396 UNQ9165/PRO28630Q6UXU0 137 aa18.03■□□□□ 0.48
TSPAN4-202ENST00000397396 C3orf56Q8N813 242 aa18.03■□□□□ 0.48
TSPAN4-202ENST00000397396 STXBP6Q8NFX7 210 aa18.03■□□□□ 0.48
TSPAN4-202ENST00000397396 RAB24Q969Q5 203 aa18.03■□□□□ 0.48
TSPAN4-202ENST00000397396 GRAMD2BQ96HH9 432 aa18.03■□□□□ 0.48
TSPAN4-202ENST00000397396 TMEM231Q9H6L2 316 aa18.03■□□□□ 0.48
TSPAN4-202ENST00000397396 SEPSECSQ9HD40 501 aaKnown RBP18.03■□□□□ 0.48
TSPAN4-202ENST00000397396 TECRQ9NZ01 308 aaKnown RBP18.03■□□□□ 0.48
TSPAN4-202ENST00000397396 H2AFB1P0C5Y9 115 aa18.02■□□□□ 0.48
TSPAN4-202ENST00000397396 C8orf88P0DMB2 117 aa18.02■□□□□ 0.48
TSPAN4-202ENST00000397396 SYNJ2BPP57105 145 aa18.02■□□□□ 0.48
TSPAN4-202ENST00000397396 SHISA2Q6UWI4 295 aa18.02■□□□□ 0.48
TSPAN4-202ENST00000397396 MARC2Q969Z3 335 aa18.02■□□□□ 0.48
TSPAN4-202ENST00000397396 UHRF2Q96PU4 802 aa18.02■□□□□ 0.48
TSPAN4-202ENST00000397396 PF4P02776 101 aa18.01■□□□□ 0.47
TSPAN4-202ENST00000397396 SLURP1P55000 103 aa18.01■□□□□ 0.47
TSPAN4-202ENST00000397396 C1orf194Q5T5A4 169 aa18.01■□□□□ 0.47
TSPAN4-202ENST00000397396 PQLC2Q6ZP29 291 aa18.01■□□□□ 0.47
TSPAN4-202ENST00000397396 MBD3L1Q8WWY6 194 aa18.01■□□□□ 0.47
TSPAN4-202ENST00000397396 GPR82Q96P67 336 aa18.01■□□□□ 0.47
TSPAN4-202ENST00000397396 MAP1LC3B2A6NCE7 125 aa18■□□□□ 0.47
TSPAN4-202ENST00000397396 FHITP49789 147 aa18■□□□□ 0.47
TSPAN4-202ENST00000397396 HIST2H2BDQ6DRA6 164 aa18■□□□□ 0.47
TSPAN4-202ENST00000397396 MAP1LC3BQ9GZQ8 125 aa18■□□□□ 0.47
TSPAN4-202ENST00000397396 IGHV3OR16-8A0A075B7F1 116 aa17.99■□□□□ 0.47
TSPAN4-202ENST00000397396 IGHV7-4-1A0A0J9YVY3 117 aa17.99■□□□□ 0.47
TSPAN4-202ENST00000397396 ZNF98A6NK75 572 aa17.99■□□□□ 0.47
TSPAN4-202ENST00000397396 M0QZ24 198 aa17.99■□□□□ 0.47
TSPAN4-202ENST00000397396 STAG3L2P0CL84 134 aa17.99■□□□□ 0.47
TSPAN4-202ENST00000397396 STAG3L3P0CL85 134 aa17.99■□□□□ 0.47
TSPAN4-202ENST00000397396 MIR17HGQ75NE6 70 aa17.99■□□□□ 0.47
TSPAN4-202ENST00000397396 OR9G4Q8NGQ1 327 aa17.99■□□□□ 0.47
TSPAN4-202ENST00000397396 DUX3Q96PT4 197 aa17.99■□□□□ 0.47
TSPAN4-202ENST00000397396 ELOVL1Q9BW60 279 aa17.99■□□□□ 0.47
TSPAN4-202ENST00000397396 U3KQE9 123 aa17.99■□□□□ 0.47
TSPAN4-202ENST00000397396 ATRQ13535 2644 aa17.99■□□□□ 0.47
TSPAN4-202ENST00000397396 TRAV1-1A0A0B4J248 108 aa17.98■□□□□ 0.47
TSPAN4-202ENST00000397396 CXorf1O96002 111 aa17.98■□□□□ 0.47
TSPAN4-202ENST00000397396 RPL7P18124 248 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-202ENST00000397396 RIPPLY3P57055 190 aa17.98■□□□□ 0.47
TSPAN4-202ENST00000397396 ZNF726P1Q15940 193 aa17.98■□□□□ 0.47
TSPAN4-202ENST00000397396 CLLU1Q5K131 121 aa17.98■□□□□ 0.47
TSPAN4-202ENST00000397396 SPATA31B1PQ5VZV4 182 aa17.98■□□□□ 0.47
TSPAN4-202ENST00000397396 BPIFA4PQ86YQ2 179 aa17.98■□□□□ 0.47
TSPAN4-202ENST00000397396 SFT2D1Q8WV19 159 aa17.98■□□□□ 0.47
TSPAN4-202ENST00000397396 SCRT1Q9BWW7 348 aa17.98■□□□□ 0.47
TSPAN4-202ENST00000397396 ZNF207O43670 478 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-202ENST00000397396 BUB3O43684 328 aa17.98■□□□□ 0.47
TSPAN4-202ENST00000397396 LCN15Q6UWW0 184 aa17.98■□□□□ 0.47
TSPAN4-202ENST00000397396 DLX4Q92988 240 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-202ENST00000397396 TMEM14CQ9P0S9 112 aa17.98■□□□□ 0.47
TSPAN4-202ENST00000397396 TMEM213A2RRL7 107 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 248.9 ms