RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 C14orf144Q96I85 54 aa11.7□□□□□ -0.54
TM9SF1-202ENST00000396854 AURKAIP1Q9NWT8 199 aaPredicted RBP11.7□□□□□ -0.54
TM9SF1-202ENST00000396854 YTHDF2Q9Y5A9 579 aaKnown RBP11.7□□□□□ -0.54
TM9SF1-202ENST00000396854 FN1P02751 2386 aaKnown RBP11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 DNAJC9-AS1A6NH13 148 aa11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 DDTP30046 118 aa11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 CNN1P51911 297 aaKnown RBP11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 ATP5IP56385 69 aaPredicted RBP11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 PRR20EP86478 221 aa11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 PRR20CP86479 221 aa11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 PRR20DP86480 221 aa11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 PRR20BP86481 221 aa11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 PRR20AP86496 221 aa11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 TNXAQ16473 311 aa11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 ZNF562Q6V9R5 426 aa11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 OR1L8Q8NGR8 309 aa11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 IGHV7-81A0A0B4J1V7 117 aa11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 ZNF320A2RRD8 509 aa11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 PGPEP1LA6NFU8 196 aa11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 ACTL6BO94805 426 aa11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 MT-CO2P00403 227 aa11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 HILS1P60008 231 aa11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 REC114Q7Z4M0 266 aa11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 TMEM18Q96B42 140 aa11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 SEPSECSQ9HD40 501 aaKnown RBP11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 ESM1Q9NQ30 184 aa11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 NDUFA4L2Q9NRX3 87 aa11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 TNFRSF19Q9NS68 423 aa11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 CUBNO60494 3623 aa11.69□□□□□ -0.54
TM9SF1-202ENST00000396854 MAST4O15021 2626 aa11.68□□□□□ -0.54
TM9SF1-202ENST00000396854 CGB1A6NKQ9 187 aa11.68□□□□□ -0.54
TM9SF1-202ENST00000396854 E7EUB6 86 aa11.68□□□□□ -0.54
TM9SF1-202ENST00000396854 RPL27AP46776 148 aaKnown RBP11.68□□□□□ -0.54
TM9SF1-202ENST00000396854 C10orf55Q5SWW7 151 aa11.68□□□□□ -0.54
TM9SF1-202ENST00000396854 SPATA31B1PQ5VZV4 182 aa11.68□□□□□ -0.54
TM9SF1-202ENST00000396854 SGMS2Q8NHU3 365 aa11.68□□□□□ -0.54
TM9SF1-202ENST00000396854 SRSF12Q8WXF0 261 aaKnown RBP11.68□□□□□ -0.54
TM9SF1-202ENST00000396854 TRAPPC1Q9Y5R8 145 aa11.68□□□□□ -0.54
TM9SF1-202ENST00000396854 LY96Q9Y6Y9 160 aa11.68□□□□□ -0.54
TM9SF1-202ENST00000396854 ARL2-SNX15V9GYD0 113 aa11.68□□□□□ -0.54
TM9SF1-202ENST00000396854 TRAV9-1A0A075B6T8 112 aa11.67□□□□□ -0.54
TM9SF1-202ENST00000396854 C9JCJ5 164 aa11.67□□□□□ -0.54
TM9SF1-202ENST00000396854 AREGP15514 252 aa11.67□□□□□ -0.54
TM9SF1-202ENST00000396854 CX3CL1P78423 397 aa11.67□□□□□ -0.54
TM9SF1-202ENST00000396854 TEX38Q6PEX7 206 aa11.67□□□□□ -0.54
TM9SF1-202ENST00000396854 GBGT1Q8N5D6 347 aa11.67□□□□□ -0.54
TM9SF1-202ENST00000396854 OCC1Q8TAD7 63 aa11.67□□□□□ -0.54
TM9SF1-202ENST00000396854 HSPB9Q9BQS6 159 aa11.67□□□□□ -0.54
TM9SF1-202ENST00000396854 HINT2Q9BX68 163 aa11.67□□□□□ -0.54
TM9SF1-202ENST00000396854 PRO1933Q9H354 126 aa11.67□□□□□ -0.54
TM9SF1-202ENST00000396854 A0A1W2PN81 502 aa11.67□□□□□ -0.54
TM9SF1-202ENST00000396854 LINC00869P0C866 280 aa11.67□□□□□ -0.54
TM9SF1-202ENST00000396854 NDPQ00604 133 aa11.67□□□□□ -0.54
TM9SF1-202ENST00000396854 FXYD3Q14802 87 aa11.67□□□□□ -0.54
TM9SF1-202ENST00000396854 OR10G8Q8NGN5 311 aa11.67□□□□□ -0.54
TM9SF1-202ENST00000396854 ARPC1AQ92747 370 aa11.67□□□□□ -0.54
TM9SF1-202ENST00000396854 DUX5Q96PT3 197 aa11.67□□□□□ -0.54
TM9SF1-202ENST00000396854 CNIH1O95406 144 aa11.66□□□□□ -0.54
TM9SF1-202ENST00000396854 YPEL3P61236 119 aaPredicted RBP11.66□□□□□ -0.54
TM9SF1-202ENST00000396854 C2orf83Q53S99 150 aa11.66□□□□□ -0.54
TM9SF1-202ENST00000396854 UHRF2Q96PU4 802 aa11.66□□□□□ -0.54
TM9SF1-202ENST00000396854 JMJD8Q96S16 334 aa11.66□□□□□ -0.54
TM9SF1-202ENST00000396854 SRSF8Q9BRL6 282 aaKnown RBP11.66□□□□□ -0.54
TM9SF1-202ENST00000396854 SLC45A2Q9UMX9 530 aa11.66□□□□□ -0.54
TM9SF1-202ENST00000396854 SH2D7A6NKC9 451 aaPredicted RBP11.66□□□□□ -0.54
TM9SF1-202ENST00000396854 TEX22C9J3V5 150 aa11.66□□□□□ -0.54
TM9SF1-202ENST00000396854 IGHG2P01859 326 aa11.66□□□□□ -0.54
TM9SF1-202ENST00000396854 RNASE1P07998 156 aaKnown RBP11.66□□□□□ -0.54
TM9SF1-202ENST00000396854 BLCAPP62952 87 aa11.66□□□□□ -0.54
TM9SF1-202ENST00000396854 RNASE2P10153 161 aaKnown RBP11.65□□□□□ -0.54
TM9SF1-202ENST00000396854 SLC35E1Q96K37 410 aa11.65□□□□□ -0.54
TM9SF1-202ENST00000396854 NOL4LQ96MY1 436 aaPredicted RBP11.65□□□□□ -0.54
TM9SF1-202ENST00000396854 NPFFR1Q9GZQ6 430 aa11.65□□□□□ -0.54
TM9SF1-202ENST00000396854 K7EN84 100 aa11.64□□□□□ -0.55
TM9SF1-202ENST00000396854 OR10W1Q8NGF6 305 aa11.64□□□□□ -0.55
TM9SF1-202ENST00000396854 IL36BQ9NZH7 164 aa11.64□□□□□ -0.55
TM9SF1-202ENST00000396854 IGLC7A0M8Q6 106 aa11.64□□□□□ -0.55
TM9SF1-202ENST00000396854 EGR2P11161 476 aaPredicted RBP11.64□□□□□ -0.55
TM9SF1-202ENST00000396854 CRIP2P52943 208 aaPredicted RBP11.64□□□□□ -0.55
TM9SF1-202ENST00000396854 ERHP84090 104 aaKnown RBP11.64□□□□□ -0.55
TM9SF1-202ENST00000396854 MIR17HGQ75NE6 70 aa11.64□□□□□ -0.55
TM9SF1-202ENST00000396854 MRPL41Q8IXM3 137 aaKnown RBP11.64□□□□□ -0.55
TM9SF1-202ENST00000396854 ZNF664Q8N3J9 261 aa11.64□□□□□ -0.55
TM9SF1-202ENST00000396854 FAM103A1Q9BTL3 118 aaKnown RBP11.64□□□□□ -0.55
TM9SF1-202ENST00000396854 TMEM167BQ9NRX6 74 aa11.64□□□□□ -0.55
TM9SF1-202ENST00000396854 ZNF580Q9UK33 172 aa11.64□□□□□ -0.55
TM9SF1-202ENST00000396854 A8MWP6 167 aa11.63□□□□□ -0.55
TM9SF1-202ENST00000396854 ATP6V0E1O15342 81 aa11.63□□□□□ -0.55
TM9SF1-202ENST00000396854 TCF21O43680 179 aa11.63□□□□□ -0.55
TM9SF1-202ENST00000396854 WT1-ASQ06250 92 aa11.63□□□□□ -0.55
TM9SF1-202ENST00000396854 Q6ZS46 218 aa11.63□□□□□ -0.55
TM9SF1-202ENST00000396854 PRSS22Q9GZN4 317 aa11.63□□□□□ -0.55
TM9SF1-202ENST00000396854 LINC01548A6NM66 108 aa11.63□□□□□ -0.55
TM9SF1-202ENST00000396854 IGF1P05019 195 aa11.63□□□□□ -0.55
TM9SF1-202ENST00000396854 ADMP35318 185 aa11.63□□□□□ -0.55
TM9SF1-202ENST00000396854 SELENOTP62341 195 aa11.63□□□□□ -0.55
TM9SF1-202ENST00000396854 ASPHD1Q5U4P2 390 aa11.63□□□□□ -0.55
TM9SF1-202ENST00000396854 Q8N2B8 174 aa11.63□□□□□ -0.55
TM9SF1-202ENST00000396854 C19orf24Q9BVV8 132 aa11.63□□□□□ -0.55
TM9SF1-202ENST00000396854 ZNF702PQ9H963 129 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms