RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 PQLC2Q6ZP29 291 aa9.81□□□□□ -0.84
TRIM39-204ENST00000396548 LCNL1Q6ZST4 164 aa9.81□□□□□ -0.84
TRIM39-204ENST00000396548 Q6ZSV7 163 aa9.81□□□□□ -0.84
TRIM39-204ENST00000396548 ZNF329Q86UD4 541 aa9.81□□□□□ -0.84
TRIM39-204ENST00000396548 SEC11CQ9BY50 192 aa9.81□□□□□ -0.84
TRIM39-204ENST00000396548 SLC25A39Q9BZJ4 359 aaPredicted RBP9.81□□□□□ -0.84
TRIM39-204ENST00000396548 CLPSL1A2RUU4 121 aa9.81□□□□□ -0.84
TRIM39-204ENST00000396548 GP9P14770 177 aa9.81□□□□□ -0.84
TRIM39-204ENST00000396548 PPT1P50897 306 aa9.81□□□□□ -0.84
TRIM39-204ENST00000396548 LYZP61626 148 aa9.81□□□□□ -0.84
TRIM39-204ENST00000396548 RBMS3Q6XE24 437 aaKnown RBP9.81□□□□□ -0.84
TRIM39-204ENST00000396548 RXFP4Q8TDU9 374 aa9.81□□□□□ -0.84
TRIM39-204ENST00000396548 Q8WTZ3 238 aa9.81□□□□□ -0.84
TRIM39-204ENST00000396548 FXYD5Q96DB9 178 aa9.81□□□□□ -0.84
TRIM39-204ENST00000396548 SHANK2-AS3Q9BTD1 123 aa9.81□□□□□ -0.84
TRIM39-204ENST00000396548 SLC35B3Q9H1N7 401 aa9.81□□□□□ -0.84
TRIM39-204ENST00000396548 HIGD1AQ9Y241 93 aa9.81□□□□□ -0.84
TRIM39-204ENST00000396548 YTHDF2Q9Y5A9 579 aaKnown RBP9.81□□□□□ -0.84
TRIM39-204ENST00000396548 ARL2-SNX15V9GYD0 113 aa9.81□□□□□ -0.84
TRIM39-204ENST00000396548 MRPS12O15235 138 aaKnown RBP9.81□□□□□ -0.84
TRIM39-204ENST00000396548 TRBV12-3P01733 135 aa9.81□□□□□ -0.84
TRIM39-204ENST00000396548 IL4P05112 153 aa9.81□□□□□ -0.84
TRIM39-204ENST00000396548 RPL15P61313 204 aaKnown RBP9.81□□□□□ -0.84
TRIM39-204ENST00000396548 FOXE3Q13461 319 aa9.81□□□□□ -0.84
TRIM39-204ENST00000396548 NF1P21359 2839 aa9.81□□□□□ -0.84
TRIM39-204ENST00000396548 PPP5D1E7EU14 171 aa9.8□□□□□ -0.84
TRIM39-204ENST00000396548 NUPL2O15504 423 aaKnown RBP9.8□□□□□ -0.84
TRIM39-204ENST00000396548 PF4V1P10720 104 aa9.8□□□□□ -0.84
TRIM39-204ENST00000396548 TAGLN2P37802 199 aaKnown RBP9.8□□□□□ -0.84
TRIM39-204ENST00000396548 TAS2R45P59539 299 aa9.8□□□□□ -0.84
TRIM39-204ENST00000396548 ZNF600Q6ZNG1 722 aa9.8□□□□□ -0.84
TRIM39-204ENST00000396548 OR5AU1Q8NGC0 362 aa9.8□□□□□ -0.84
TRIM39-204ENST00000396548 FAM74A7A6NL05 159 aa9.8□□□□□ -0.84
TRIM39-204ENST00000396548 PAGE4O60829 102 aa9.8□□□□□ -0.84
TRIM39-204ENST00000396548 IFNA1P01562 189 aa9.8□□□□□ -0.84
TRIM39-204ENST00000396548 MEF2BQ02080 365 aaPredicted RBP9.8□□□□□ -0.84
TRIM39-204ENST00000396548 TOMM20LQ6UXN7 152 aa9.8□□□□□ -0.84
TRIM39-204ENST00000396548 TMEM14CQ9P0S9 112 aa9.8□□□□□ -0.84
TRIM39-204ENST00000396548 PUS1Q9Y606 427 aaKnown RBP eCLIP9.8□□□□□ -0.84
TRIM39-204ENST00000396548 C16orf95Q9H693 158 aa9.79□□□□□ -0.84
TRIM39-204ENST00000396548 SONP18583 2426 aaKnown RBP9.79□□□□□ -0.84
TRIM39-204ENST00000396548 A0A0G2JLM5 398 aa9.79□□□□□ -0.84
TRIM39-204ENST00000396548 ELANEP08246 267 aa9.79□□□□□ -0.84
TRIM39-204ENST00000396548 PYYP10082 97 aa9.79□□□□□ -0.84
TRIM39-204ENST00000396548 FAM90A2PQ658T7 463 aa9.79□□□□□ -0.84
TRIM39-204ENST00000396548 TEX38Q6PEX7 206 aa9.79□□□□□ -0.84
TRIM39-204ENST00000396548 CYSRT1A8MQ03 144 aa9.79□□□□□ -0.84
TRIM39-204ENST00000396548 OR4X2Q8NGF9 303 aa9.79□□□□□ -0.84
TRIM39-204ENST00000396548 OR51M1Q9H341 326 aa9.79□□□□□ -0.84
TRIM39-204ENST00000396548 TMEM167BQ9NRX6 74 aa9.79□□□□□ -0.84
TRIM39-204ENST00000396548 NSD1Q96L73 2696 aaPredicted RBP9.78□□□□□ -0.84
TRIM39-204ENST00000396548 INAFM1C9JVW0 142 aa9.78□□□□□ -0.84
TRIM39-204ENST00000396548 BMPR1BO00238 502 aa9.78□□□□□ -0.84
TRIM39-204ENST00000396548 SCGB2A1O75556 95 aa9.78□□□□□ -0.84
TRIM39-204ENST00000396548 RPLP1P05386 114 aaKnown RBP9.78□□□□□ -0.84
TRIM39-204ENST00000396548 ATF4P18848 351 aaPredicted RBP9.78□□□□□ -0.84
TRIM39-204ENST00000396548 NPPCP23582 126 aa9.78□□□□□ -0.84
TRIM39-204ENST00000396548 LEMD1Q68G75 181 aa9.78□□□□□ -0.84
TRIM39-204ENST00000396548 CYB561D1Q8N8Q1 229 aa9.78□□□□□ -0.84
TRIM39-204ENST00000396548 OR10J4P0C629 311 aa9.78□□□□□ -0.84
TRIM39-204ENST00000396548 MYCNOSP40205 109 aa9.78□□□□□ -0.84
TRIM39-204ENST00000396548 ATP5G3P48201 142 aa9.78□□□□□ -0.84
TRIM39-204ENST00000396548 NARS2Q96I59 477 aaKnown RBP9.78□□□□□ -0.84
TRIM39-204ENST00000396548 PAXXQ9BUH6 204 aa9.78□□□□□ -0.84
TRIM39-204ENST00000396548 U3KQE9 123 aa9.78□□□□□ -0.84
TRIM39-204ENST00000396548 OR7C2O60412 319 aa9.77□□□□□ -0.84
TRIM39-204ENST00000396548 ARL3P36405 182 aa9.77□□□□□ -0.84
TRIM39-204ENST00000396548 SLC35B1P78383 322 aa9.77□□□□□ -0.84
TRIM39-204ENST00000396548 TCTEX1D4Q5JR98 221 aa9.77□□□□□ -0.84
TRIM39-204ENST00000396548 STXBP6Q8NFX7 210 aa9.77□□□□□ -0.84
TRIM39-204ENST00000396548 F8W036 122 aa9.77□□□□□ -0.85
TRIM39-204ENST00000396548 IGHV3-11P01762 117 aa9.77□□□□□ -0.85
TRIM39-204ENST00000396548 UBE2G2P60604 165 aa9.77□□□□□ -0.85
TRIM39-204ENST00000396548 RELQ04864 619 aaPredicted RBP9.77□□□□□ -0.85
TRIM39-204ENST00000396548 GUCA2BQ16661 112 aa9.77□□□□□ -0.85
TRIM39-204ENST00000396548 C17orf77Q96MU5 243 aa9.77□□□□□ -0.85
TRIM39-204ENST00000396548 TXNDC17Q9BRA2 123 aa9.77□□□□□ -0.85
TRIM39-204ENST00000396548 ZNF98A6NK75 572 aa9.77□□□□□ -0.85
TRIM39-204ENST00000396548 C11orf94C9JXX5 98 aa9.77□□□□□ -0.85
TRIM39-204ENST00000396548 TMEM250H0YL14 139 aa9.77□□□□□ -0.85
TRIM39-204ENST00000396548 IGLC2P0DOY2 106 aa9.77□□□□□ -0.85
TRIM39-204ENST00000396548 Q71RC1 249 aaPredicted RBP9.77□□□□□ -0.85
TRIM39-204ENST00000396548 GNB4Q9HAV0 340 aa9.77□□□□□ -0.85
TRIM39-204ENST00000396548 BAHCC1Q9P281 2608 aa9.76□□□□□ -0.85
TRIM39-204ENST00000396548 FAM209BQ5JX69 171 aa9.76□□□□□ -0.85
TRIM39-204ENST00000396548 ZNF418Q8TF45 676 aaPredicted RBP9.76□□□□□ -0.85
TRIM39-204ENST00000396548 IGHV3-35A0A0C4DH35 117 aa9.76□□□□□ -0.85
TRIM39-204ENST00000396548 A0A1W2PRE2 83 aa9.76□□□□□ -0.85
TRIM39-204ENST00000396548 GGTLC3B5MD39 225 aa9.76□□□□□ -0.85
TRIM39-204ENST00000396548 UBE2E2Q96LR5 201 aa9.76□□□□□ -0.85
TRIM39-204ENST00000396548 H3BQ15 152 aa9.75□□□□□ -0.85
TRIM39-204ENST00000396548 NDUFA4O00483 81 aa9.75□□□□□ -0.85
TRIM39-204ENST00000396548 CRYBB3P26998 211 aa9.75□□□□□ -0.85
TRIM39-204ENST00000396548 UBE2L3P68036 154 aaKnown RBP9.75□□□□□ -0.85
TRIM39-204ENST00000396548 ZNF586Q9NXT0 402 aa9.75□□□□□ -0.85
TRIM39-204ENST00000396548 PEF1Q9UBV8 284 aaKnown RBP9.75□□□□□ -0.85
TRIM39-204ENST00000396548 RABAC1Q9UI14 185 aa9.75□□□□□ -0.85
TRIM39-204ENST00000396548 ATRAIDQ6UW56 229 aa9.75□□□□□ -0.85
TRIM39-204ENST00000396548 UNQ9165/PRO28630Q6UXU0 137 aa9.75□□□□□ -0.85
TRIM39-204ENST00000396548 KLHDC1Q8N7A1 406 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms