RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 DAD1P61803 113 aa12.42□□□□□ -0.42
EXOSC3-202ENST00000396521 SCGB2B2Q4G0G5 96 aa12.42□□□□□ -0.42
EXOSC3-202ENST00000396521 NMSQ5H8A3 153 aa12.42□□□□□ -0.42
EXOSC3-202ENST00000396521 STEAP1BQ6NZ63 245 aa12.42□□□□□ -0.42
EXOSC3-202ENST00000396521 GSG1LQ6UXU4 331 aa12.42□□□□□ -0.42
EXOSC3-202ENST00000396521 OR4B1Q8NGF8 309 aa12.42□□□□□ -0.42
EXOSC3-202ENST00000396521 SOSTQ9BQB4 213 aa12.42□□□□□ -0.42
EXOSC3-202ENST00000396521 C7orf50Q9BRJ6 194 aaKnown RBP12.42□□□□□ -0.42
EXOSC3-202ENST00000396521 LOC102723971A0A1B0GUV8 181 aa12.41□□□□□ -0.42
EXOSC3-202ENST00000396521 HTN3P15516 51 aa12.41□□□□□ -0.42
EXOSC3-202ENST00000396521 FAUP35544 74 aaKnown RBP12.41□□□□□ -0.42
EXOSC3-202ENST00000396521 MEOX2P50222 304 aa12.41□□□□□ -0.42
EXOSC3-202ENST00000396521 SUPT4H1P63272 117 aaKnown RBP12.41□□□□□ -0.42
EXOSC3-202ENST00000396521 GDF5OSQ5U4N7 250 aa12.41□□□□□ -0.42
EXOSC3-202ENST00000396521 SELENOHQ8IZQ5 122 aaKnown RBP12.41□□□□□ -0.42
EXOSC3-202ENST00000396521 TOMM5Q8N4H5 51 aa12.41□□□□□ -0.42
EXOSC3-202ENST00000396521 MARCH1Q8TCQ1 289 aa12.41□□□□□ -0.42
EXOSC3-202ENST00000396521 IL22RA2Q969J5 263 aa12.41□□□□□ -0.42
EXOSC3-202ENST00000396521 ATG101Q9BSB4 218 aa12.41□□□□□ -0.42
EXOSC3-202ENST00000396521 SRRQ9GZT4 340 aa12.41□□□□□ -0.42
EXOSC3-202ENST00000396521 NAA60Q9H7X0 242 aa12.41□□□□□ -0.42
EXOSC3-202ENST00000396521 YTHDF2Q9Y5A9 579 aaKnown RBP12.41□□□□□ -0.42
EXOSC3-202ENST00000396521 SNRPGP15A8MWD9 76 aa12.4□□□□□ -0.42
EXOSC3-202ENST00000396521 DISC1C4P0D8 188 aa12.4□□□□□ -0.42
EXOSC3-202ENST00000396521 NXPH3O95157 252 aa12.4□□□□□ -0.42
EXOSC3-202ENST00000396521 SULT1A3P0DMM9 295 aa12.4□□□□□ -0.42
EXOSC3-202ENST00000396521 SULT1A4P0DMN0 295 aa12.4□□□□□ -0.42
EXOSC3-202ENST00000396521 GPX4P36969 197 aaPredicted RBP12.4□□□□□ -0.42
EXOSC3-202ENST00000396521 B2MP61769 119 aa12.4□□□□□ -0.42
EXOSC3-202ENST00000396521 FAAP20Q6NZ36 180 aa12.4□□□□□ -0.42
EXOSC3-202ENST00000396521 TMEM88Q6PEY1 159 aa12.4□□□□□ -0.42
EXOSC3-202ENST00000396521 TMEM170AQ8WVE7 144 aa12.4□□□□□ -0.42
EXOSC3-202ENST00000396521 S100ZQ8WXG8 99 aa12.4□□□□□ -0.42
EXOSC3-202ENST00000396521 TRIM63Q969Q1 353 aa12.4□□□□□ -0.42
EXOSC3-202ENST00000396521 GPR146Q96CH1 333 aa12.4□□□□□ -0.42
EXOSC3-202ENST00000396521 PBDC1Q9BVG4 233 aa12.4□□□□□ -0.42
EXOSC3-202ENST00000396521 WDR12Q9GZL7 423 aaKnown RBP12.4□□□□□ -0.42
EXOSC3-202ENST00000396521 MAGT1Q9H0U3 335 aa12.4□□□□□ -0.42
EXOSC3-202ENST00000396521 RPRMQ9NS64 109 aa12.4□□□□□ -0.42
EXOSC3-202ENST00000396521 KCNIP3Q9Y2W7 256 aa12.4□□□□□ -0.42
EXOSC3-202ENST00000396521 TMEM56-RWDD3S4R434 201 aa12.4□□□□□ -0.42
EXOSC3-202ENST00000396521 PIGBOS1A0A0B4J2F0 54 aa12.39□□□□□ -0.43
EXOSC3-202ENST00000396521 ANKRD20A5PA0PJZ0 165 aa12.39□□□□□ -0.43
EXOSC3-202ENST00000396521 ZFP92A6NM28 416 aa12.39□□□□□ -0.43
EXOSC3-202ENST00000396521 LYRM9A8MSI8 78 aa12.39□□□□□ -0.43
EXOSC3-202ENST00000396521 C16orf90A8MZG2 172 aa12.39□□□□□ -0.43
EXOSC3-202ENST00000396521 CFDP00746 253 aaPredicted RBP12.39□□□□□ -0.43
EXOSC3-202ENST00000396521 FXYD7P58549 80 aa12.39□□□□□ -0.43
EXOSC3-202ENST00000396521 TMEM268Q5VZI3 342 aa12.39□□□□□ -0.43
EXOSC3-202ENST00000396521 LINC00299Q6ZSB3 139 aa12.39□□□□□ -0.43
EXOSC3-202ENST00000396521 OR4D10Q8NGI6 311 aa12.39□□□□□ -0.43
EXOSC3-202ENST00000396521 OR4C16Q8NGL9 310 aa12.39□□□□□ -0.43
EXOSC3-202ENST00000396521 RTBDNQ9BSG5 229 aaPredicted RBP12.39□□□□□ -0.43
EXOSC3-202ENST00000396521 KRTAP4-5Q9BYR2 181 aa12.39□□□□□ -0.43
EXOSC3-202ENST00000396521 MCUBQ9NWR8 336 aa12.39□□□□□ -0.43
EXOSC3-202ENST00000396521 A0A0J9YX75 114 aa12.38□□□□□ -0.43
EXOSC3-202ENST00000396521 SOCS3O14543 225 aa12.38□□□□□ -0.43
EXOSC3-202ENST00000396521 S100A7P31151 101 aa12.38□□□□□ -0.43
EXOSC3-202ENST00000396521 FAM78BQ5VT40 261 aa12.38□□□□□ -0.43
EXOSC3-202ENST00000396521 OR8I2Q8N0Y5 310 aa12.38□□□□□ -0.43
EXOSC3-202ENST00000396521 LGI3Q8N145 548 aa12.38□□□□□ -0.43
EXOSC3-202ENST00000396521 C1orf158Q8N1D5 194 aa12.38□□□□□ -0.43
EXOSC3-202ENST00000396521 LHFPL5Q8TAF8 219 aa12.38□□□□□ -0.43
EXOSC3-202ENST00000396521 IGF2BP2-AS1Q96M15 143 aa12.38□□□□□ -0.43
EXOSC3-202ENST00000396521 PRRT1Q99946 306 aa12.38□□□□□ -0.43
EXOSC3-202ENST00000396521 TMEM208Q9BTX3 173 aa12.38□□□□□ -0.43
EXOSC3-202ENST00000396521 SLC35B3Q9H1N7 401 aa12.38□□□□□ -0.43
EXOSC3-202ENST00000396521 CRYM-AS1A6NIL9 109 aa12.37□□□□□ -0.43
EXOSC3-202ENST00000396521 CCR6P51684 374 aa12.37□□□□□ -0.43
EXOSC3-202ENST00000396521 SLC35E1Q96K37 410 aa12.37□□□□□ -0.43
EXOSC3-202ENST00000396521 HSPB7Q9UBY9 170 aa12.37□□□□□ -0.43
EXOSC3-202ENST00000396521 NBDYA0A0U1RRE5 68 aa12.36□□□□□ -0.43
EXOSC3-202ENST00000396521 A8MTW9 85 aa12.36□□□□□ -0.43
EXOSC3-202ENST00000396521 GALR1P47211 349 aa12.36□□□□□ -0.43
EXOSC3-202ENST00000396521 C6orf223Q8N319 242 aa12.36□□□□□ -0.43
EXOSC3-202ENST00000396521 DTD1Q8TEA8 209 aa12.36□□□□□ -0.43
EXOSC3-202ENST00000396521 PPP1R14BQ96C90 147 aa12.36□□□□□ -0.43
EXOSC3-202ENST00000396521 SCGB3A2Q96PL1 93 aa12.36□□□□□ -0.43
EXOSC3-202ENST00000396521 DOK5Q9P104 306 aa12.36□□□□□ -0.43
EXOSC3-202ENST00000396521 SCP2D1Q9UJQ7 156 aa12.36□□□□□ -0.43
EXOSC3-202ENST00000396521 SLC45A2Q9UMX9 530 aa12.36□□□□□ -0.43
EXOSC3-202ENST00000396521 GPR132Q9UNW8 380 aa12.36□□□□□ -0.43
EXOSC3-202ENST00000396521 ABCA13Q86UQ4 5058 aa12.36□□□□□ -0.43
EXOSC3-202ENST00000396521 TSPOP30536 169 aa12.35□□□□□ -0.43
EXOSC3-202ENST00000396521 CCL18P55774 89 aa12.35□□□□□ -0.43
EXOSC3-202ENST00000396521 GAMTQ14353 236 aa12.35□□□□□ -0.43
EXOSC3-202ENST00000396521 MAPKAPK5-AS1Q8N8E1 139 aa12.35□□□□□ -0.43
EXOSC3-202ENST00000396521 OR51S1Q8NGJ8 323 aa12.35□□□□□ -0.43
EXOSC3-202ENST00000396521 DEDD2Q8WXF8 326 aa12.35□□□□□ -0.43
EXOSC3-202ENST00000396521 DUSP14O95147 198 aaKnown RBP12.34□□□□□ -0.43
EXOSC3-202ENST00000396521 IL7P13232 177 aa12.34□□□□□ -0.43
EXOSC3-202ENST00000396521 DEFB1P60022 68 aa12.34□□□□□ -0.43
EXOSC3-202ENST00000396521 LYZP61626 148 aa12.34□□□□□ -0.43
EXOSC3-202ENST00000396521 ZNF90Q03938 601 aa12.34□□□□□ -0.43
EXOSC3-202ENST00000396521 TNP2Q05952 138 aa12.34□□□□□ -0.43
EXOSC3-202ENST00000396521 ZNF846Q147U1 533 aa12.34□□□□□ -0.43
EXOSC3-202ENST00000396521 SMCO1Q147U7 214 aa12.34□□□□□ -0.43
EXOSC3-202ENST00000396521 BAK1Q16611 211 aa12.34□□□□□ -0.43
EXOSC3-202ENST00000396521 GGNBP1Q5YKI7 109 aa12.34□□□□□ -0.43
EXOSC3-202ENST00000396521 OR4D5Q8NGN0 318 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms