RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 ZNF430Q9H8G1 570 aaPredicted RBP11.31□□□□□ -0.6
CCHCR1-203ENST00000396268 UCNP55089 124 aa11.31□□□□□ -0.6
CCHCR1-203ENST00000396268 PATE2Q6UY27 113 aa11.31□□□□□ -0.6
CCHCR1-203ENST00000396268 LINC00305Q7Z4B0 112 aa11.31□□□□□ -0.6
CCHCR1-203ENST00000396268 ZNF329Q86UD4 541 aa11.31□□□□□ -0.6
CCHCR1-203ENST00000396268 OR1L4Q8NGR5 311 aa11.31□□□□□ -0.6
CCHCR1-203ENST00000396268 ZNF714Q96N38 554 aa11.31□□□□□ -0.6
CCHCR1-203ENST00000396268 TNFRSF19Q9NS68 423 aa11.31□□□□□ -0.6
CCHCR1-203ENST00000396268 HRNRQ86YZ3 2850 aaPredicted RBP11.3□□□□□ -0.6
CCHCR1-203ENST00000396268 IGHV2-70DA0A0C4DH43 119 aa11.3□□□□□ -0.6
CCHCR1-203ENST00000396268 HIGD1CA8MV81 97 aa11.3□□□□□ -0.6
CCHCR1-203ENST00000396268 H3BTX0 84 aa11.3□□□□□ -0.6
CCHCR1-203ENST00000396268 TOMM40O96008 361 aa11.3□□□□□ -0.6
CCHCR1-203ENST00000396268 MOSP00540 346 aa11.3□□□□□ -0.6
CCHCR1-203ENST00000396268 APELAP0DMC3 54 aa11.3□□□□□ -0.6
CCHCR1-203ENST00000396268 CD40P25942 277 aa11.3□□□□□ -0.6
CCHCR1-203ENST00000396268 C19orf35Q6ZS72 473 aa11.3□□□□□ -0.6
CCHCR1-203ENST00000396268 TCF24Q7RTU0 167 aa11.3□□□□□ -0.6
CCHCR1-203ENST00000396268 NAA38Q9BRA0 125 aaKnown RBP11.3□□□□□ -0.6
CCHCR1-203ENST00000396268 OR4C46A6NHA9 309 aa11.3□□□□□ -0.6
CCHCR1-203ENST00000396268 OR4C13Q8NGP0 309 aa11.3□□□□□ -0.6
CCHCR1-203ENST00000396268 LINC00574Q9H8X3 128 aa11.3□□□□□ -0.6
CCHCR1-203ENST00000396268 SAP30LQ9HAJ7 183 aa11.3□□□□□ -0.6
CCHCR1-203ENST00000396268 MRPL36Q9P0J6 103 aaKnown RBP11.3□□□□□ -0.6
CCHCR1-203ENST00000396268 MRPS16Q9Y3D3 137 aaKnown RBP11.3□□□□□ -0.6
CCHCR1-203ENST00000396268 ABCA4P78363 2273 aa11.3□□□□□ -0.6
CCHCR1-203ENST00000396268 SLC25A5P05141 298 aaKnown RBP11.29□□□□□ -0.6
CCHCR1-203ENST00000396268 SUB1P53999 127 aaKnown RBP eCLIP11.29□□□□□ -0.6
CCHCR1-203ENST00000396268 CDSNQ15517 529 aa11.29□□□□□ -0.6
CCHCR1-203ENST00000396268 WFDC8Q8IUA0 241 aa11.29□□□□□ -0.6
CCHCR1-203ENST00000396268 OR1B1Q8NGR6 318 aa11.29□□□□□ -0.6
CCHCR1-203ENST00000396268 GRAMD2BQ96HH9 432 aa11.29□□□□□ -0.6
CCHCR1-203ENST00000396268 HIVEP3Q5T1R4 2406 aa11.29□□□□□ -0.6
CCHCR1-203ENST00000396268 A0A087X0K7 114 aa11.29□□□□□ -0.6
CCHCR1-203ENST00000396268 IGHV3-21A0A0B4J1V1 117 aa11.29□□□□□ -0.6
CCHCR1-203ENST00000396268 IGHV1-69-2A0A0G2JMI3 117 aa11.29□□□□□ -0.6
CCHCR1-203ENST00000396268 TCRBV4S1A1TA0A5B7 111 aa11.29□□□□□ -0.6
CCHCR1-203ENST00000396268 SLC25A17O43808 307 aa11.29□□□□□ -0.6
CCHCR1-203ENST00000396268 CSN3P07498 182 aa11.29□□□□□ -0.6
CCHCR1-203ENST00000396268 FOXE3Q13461 319 aa11.29□□□□□ -0.6
CCHCR1-203ENST00000396268 HCP5Q6MZN7 132 aa11.29□□□□□ -0.6
CCHCR1-203ENST00000396268 OR5AN1Q8NGI8 311 aa11.29□□□□□ -0.6
CCHCR1-203ENST00000396268 ASH1LQ9NR48 2969 aaKnown RBP11.29□□□□□ -0.6
CCHCR1-203ENST00000396268 TACC2O95359 2948 aa11.29□□□□□ -0.6
CCHCR1-203ENST00000396268 K7EP13 123 aa11.28□□□□□ -0.6
CCHCR1-203ENST00000396268 ENSAO43768 121 aaKnown RBP11.28□□□□□ -0.6
CCHCR1-203ENST00000396268 RIPPLY3P57055 190 aa11.28□□□□□ -0.6
CCHCR1-203ENST00000396268 TMEM30BQ3MIR4 351 aa11.28□□□□□ -0.6
CCHCR1-203ENST00000396268 TMEM200BQ69YZ2 307 aa11.28□□□□□ -0.6
CCHCR1-203ENST00000396268 SSX8Q7RTT4 187 aa11.28□□□□□ -0.6
CCHCR1-203ENST00000396268 PDPNQ86YL7 162 aa11.28□□□□□ -0.6
CCHCR1-203ENST00000396268 CCL17Q92583 94 aa11.28□□□□□ -0.6
CCHCR1-203ENST00000396268 CST9LQ9H4G1 147 aa11.28□□□□□ -0.6
CCHCR1-203ENST00000396268 IGHV3-72A0A0B4J1Y9 119 aa11.28□□□□□ -0.6
CCHCR1-203ENST00000396268 PGPA6NDG6 321 aa11.28□□□□□ -0.6
CCHCR1-203ENST00000396268 THBDP07204 575 aa11.28□□□□□ -0.6
CCHCR1-203ENST00000396268 TNFRSF1AP19438 455 aa11.28□□□□□ -0.6
CCHCR1-203ENST00000396268 GRNP28799 593 aaKnown RBP11.28□□□□□ -0.6
CCHCR1-203ENST00000396268 TMEM177Q53S58 311 aa11.28□□□□□ -0.6
CCHCR1-203ENST00000396268 TEX36Q5VZQ5 186 aa11.28□□□□□ -0.6
CCHCR1-203ENST00000396268 VSTM2AQ8TAG5 236 aa11.28□□□□□ -0.6
CCHCR1-203ENST00000396268 FXYD5Q96DB9 178 aa11.28□□□□□ -0.6
CCHCR1-203ENST00000396268 HIST1H1EP10412 219 aaKnown RBP11.28□□□□□ -0.6
CCHCR1-203ENST00000396268 MUC15Q8N387 334 aa11.28□□□□□ -0.6
CCHCR1-203ENST00000396268 TPSG1Q9NRR2 321 aa11.28□□□□□ -0.6
CCHCR1-203ENST00000396268 ANKHD1Q8IWZ3 2542 aaKnown RBP11.27□□□□□ -0.6
CCHCR1-203ENST00000396268 IGKV1D-37A0A075B6S9 117 aa11.27□□□□□ -0.61
CCHCR1-203ENST00000396268 C2orf70A6NJV1 201 aa11.27□□□□□ -0.61
CCHCR1-203ENST00000396268 CGB1A6NKQ9 187 aa11.27□□□□□ -0.61
CCHCR1-203ENST00000396268 VWC2LB2RUY7 222 aa11.27□□□□□ -0.61
CCHCR1-203ENST00000396268 TOX4O94842 621 aa11.27□□□□□ -0.61
CCHCR1-203ENST00000396268 TMEM167AQ8TBQ9 72 aa11.27□□□□□ -0.61
CCHCR1-203ENST00000396268 MBD6Q96DN6 1003 aa11.27□□□□□ -0.61
CCHCR1-203ENST00000396268 MRPL27Q9P0M9 148 aaKnown RBP11.27□□□□□ -0.61
CCHCR1-203ENST00000396268 C16orf97H3BN30 126 aa11.27□□□□□ -0.61
CCHCR1-203ENST00000396268 TAX1BP3O14907 124 aa11.27□□□□□ -0.61
CCHCR1-203ENST00000396268 UQCRFS1P47985 274 aa11.27□□□□□ -0.61
CCHCR1-203ENST00000396268 FAM231DQ6ZW35 169 aa11.27□□□□□ -0.61
CCHCR1-203ENST00000396268 OR8B3Q8NGG8 313 aa11.26□□□□□ -0.61
CCHCR1-203ENST00000396268 RALYQ9UKM9 306 aaKnown RBP11.26□□□□□ -0.61
CCHCR1-203ENST00000396268 USP24Q9UPU5 2620 aa11.26□□□□□ -0.61
CCHCR1-203ENST00000396268 SPTAN1Q13813 2472 aaKnown RBP11.26□□□□□ -0.61
CCHCR1-203ENST00000396268 KLRB1Q12918 225 aa11.26□□□□□ -0.61
CCHCR1-203ENST00000396268 OCIAD2Q56VL3 154 aa11.26□□□□□ -0.61
CCHCR1-203ENST00000396268 WIPF2Q8TF74 440 aaPredicted RBP11.26□□□□□ -0.61
CCHCR1-203ENST00000396268 CHRDL1Q9BU40 450 aa11.26□□□□□ -0.61
CCHCR1-203ENST00000396268 TMEM70Q9BUB7 260 aa11.26□□□□□ -0.61
CCHCR1-203ENST00000396268 EPDR1Q9UM22 224 aa11.26□□□□□ -0.61
CCHCR1-203ENST00000396268 FLNCQ14315 2725 aa11.26□□□□□ -0.61
CCHCR1-203ENST00000396268 A0A1W2PPI3 338 aa11.25□□□□□ -0.61
CCHCR1-203ENST00000396268 MEF2CQ06413 473 aaPredicted RBP11.25□□□□□ -0.61
CCHCR1-203ENST00000396268 RUSC1-AS1Q66K80 236 aa11.25□□□□□ -0.61
CCHCR1-203ENST00000396268 RASL11AQ6T310 242 aa11.25□□□□□ -0.61
CCHCR1-203ENST00000396268 TMEM108Q6UXF1 575 aa11.25□□□□□ -0.61
CCHCR1-203ENST00000396268 RITA1Q96K30 269 aa11.25□□□□□ -0.61
CCHCR1-203ENST00000396268 JKAMPQ9P055 326 aa11.25□□□□□ -0.61
CCHCR1-203ENST00000396268 PPIAL4EA0A075B759 164 aa11.25□□□□□ -0.61
CCHCR1-203ENST00000396268 C17orf100A8MU93 164 aa11.25□□□□□ -0.61
CCHCR1-203ENST00000396268 PPIAL4DF5H284 164 aa11.25□□□□□ -0.61
CCHCR1-203ENST00000396268 SAP30O75446 220 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms