RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 WDR87Q6ZQQ6 2873 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 TMSB15BA0A087X1C1 80 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 TRBV6-6A0A0A6YYG2 114 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 A0A0G2JRQ6 117 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 PSMB11A5LHX3 300 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 SH2D7A6NKC9 451 aaPredicted RBP4.67□□□□□ -1.66
RFFL-202ENST00000394597 IGKV1D-33P01593 117 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 IGKV1-33P01594 117 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 TFF1P04155 84 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 IGFBP2P18065 325 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 OPRK1P41145 380 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 PAX9P55771 341 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 RPL11P62913 178 aaKnown RBP4.67□□□□□ -1.66
RFFL-202ENST00000394597 ADIPOQQ15848 244 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 CHCHD1Q96BP2 118 aaKnown RBP4.67□□□□□ -1.66
RFFL-202ENST00000394597 NABP2Q9BQ15 211 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 PAXXQ9BUH6 204 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 TNFRSF19Q9NS68 423 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 LINC00312Q9Y6C7 94 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 ZGRF1Q86YA3 2104 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 J3QR06 171 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 PSPNO60542 156 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 YPEL1O60688 119 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 WISP2O76076 250 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 NEUROG1Q92886 237 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 C18orf15Q96N68 181 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 YPEL2Q96QA6 119 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 SRSF8Q9BRL6 282 aaKnown RBP4.66□□□□□ -1.66
RFFL-202ENST00000394597 ZNF581Q9P0T4 197 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 A0A1W2PPM0 123 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 C9JCJ5 164 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 C8orf88P0DMB2 117 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 RPL7P18124 248 aaKnown RBP4.66□□□□□ -1.66
RFFL-202ENST00000394597 GATA2P23769 480 aaPredicted RBP4.66□□□□□ -1.66
RFFL-202ENST00000394597 CACNG7P62955 275 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 RHOGP84095 191 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 CCDC144NLQ6NUI1 221 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 Q6ZS49 121 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 TCF24Q7RTU0 167 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 BOD1L2Q8IYS8 172 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 CD177Q8N6Q3 437 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 OR1L8Q8NGR8 309 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 VCX2Q9H322 139 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 MBNL3Q9NUK0 354 aaKnown RBP4.66□□□□□ -1.66
RFFL-202ENST00000394597 C1RLQ9NZP8 487 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.66□□□□□ -1.66
RFFL-202ENST00000394597 REG1AP05451 166 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 GAGE5Q13069 117 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 GAGE6Q13070 117 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.66□□□□□ -1.66
RFFL-202ENST00000394597 HS3ST6Q96QI5 342 aa4.66□□□□□ -1.66
RFFL-202ENST00000394597 YLPM1P49750 1951 aaKnown RBP4.65□□□□□ -1.66
RFFL-202ENST00000394597 EML6Q6ZMW3 1958 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 TRAV8-2A0A0B4J237 113 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 TRAV5A0A0B4J249 113 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 PGPA6NDG6 321 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 E7EQL1 145 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 TMEM178BH3BS89 294 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 ATP5J2P56134 94 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 C10orf113Q5VZT2 155 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 Q6ZR03 302 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 Q6ZRM9 215 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 SEM1Q6ZVN7 128 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 WFDC3Q8IUB2 231 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 PIMREGQ9BSJ6 248 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 WDR83OSQ9Y284 106 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 LSM4Q9Y4Z0 139 aaKnown RBP4.65□□□□□ -1.66
RFFL-202ENST00000394597 TMEM262E9PQX1 116 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 PLAUP00749 431 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 OR9G9P0C7N8 305 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 ZNF138P52744 262 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 RPL39P5Q59GN2 51 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 TMEM14EPQ6UXP3 125 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 MIR17HGQ75NE6 70 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 SYT8Q8NBV8 401 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 CCL19Q99731 98 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 NPFFR1Q9GZQ6 430 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 METRNQ9UJH8 293 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 UFC1Q9Y3C8 167 aa4.65□□□□□ -1.66
RFFL-202ENST00000394597 LYNX1G3V0Z9 82 aa4.65□□□□□ -1.67
RFFL-202ENST00000394597 LYNX1P0DP58 116 aa4.65□□□□□ -1.67
RFFL-202ENST00000394597 CKS2P33552 79 aa4.65□□□□□ -1.67
RFFL-202ENST00000394597 EBLN2Q6P2I7 272 aa4.65□□□□□ -1.67
RFFL-202ENST00000394597 LHFPL4Q7Z7J7 247 aa4.65□□□□□ -1.67
RFFL-202ENST00000394597 SLC25A33Q9BSK2 321 aa4.65□□□□□ -1.67
RFFL-202ENST00000394597 C17orf98A8MV24 154 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 TGFAP01135 160 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 THBDP07204 575 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 ERVK11-1P61568 191 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 HSPE1P61604 102 aaKnown RBP4.64□□□□□ -1.67
RFFL-202ENST00000394597 WDR86Q86TI4 376 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 MYOZ3Q8TDC0 251 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 SSC4DQ8WTU2 575 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 SRSF12Q8WXF0 261 aaKnown RBP4.64□□□□□ -1.67
RFFL-202ENST00000394597 CYYR1Q96J86 154 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 RABAC1Q9UI14 185 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 RANBP2P49792 3224 aaKnown RBP4.64□□□□□ -1.67
RFFL-202ENST00000394597 FREM1Q5H8C1 2179 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 IGLV3-9A0A075B6K5 115 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 IGKV1D-17A0A075B6S4 117 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms