RNA–Protein interactions for RNA: ENST00000393559.1

LAMB1-202, Transcript of laminin subunit beta 1, humanhuman

TSL 2

Gene LAMB1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-202ENST00000393559 SAT2Q96F10 170 aaPredicted RBP10.56□□□□□ -0.72
LAMB1-202ENST00000393559 ZNF414Q96IQ9 312 aa10.56□□□□□ -0.72
LAMB1-202ENST00000393559 PFDN5Q99471 154 aa10.56□□□□□ -0.72
LAMB1-202ENST00000393559 PBDC1Q9BVG4 233 aa10.56□□□□□ -0.72
LAMB1-202ENST00000393559 ACTR3CQ9C0K3 210 aaPredicted RBP10.56□□□□□ -0.72
LAMB1-202ENST00000393559 PUS1Q9Y606 427 aaKnown RBP eCLIP10.56□□□□□ -0.72
LAMB1-202ENST00000393559 KMT2CQ8NEZ4 4911 aaKnown RBP10.55□□□□□ -0.72
LAMB1-202ENST00000393559 WI2-2373I1.2A0A1W2PRP0 233 aa10.55□□□□□ -0.72
LAMB1-202ENST00000393559 BMPR1BO00238 502 aa10.55□□□□□ -0.72
LAMB1-202ENST00000393559 HYPMO75409 117 aa10.55□□□□□ -0.72
LAMB1-202ENST00000393559 OR2C1O95371 312 aa10.55□□□□□ -0.72
LAMB1-202ENST00000393559 IL4P05112 153 aa10.55□□□□□ -0.72
LAMB1-202ENST00000393559 CDX1P47902 265 aaPredicted RBP10.55□□□□□ -0.72
LAMB1-202ENST00000393559 PLP1P60201 277 aa10.55□□□□□ -0.72
LAMB1-202ENST00000393559 PXDC1Q5TGL8 231 aa10.55□□□□□ -0.72
LAMB1-202ENST00000393559 SPATA31B1PQ5VZV4 182 aa10.55□□□□□ -0.72
LAMB1-202ENST00000393559 PATE2Q6UY27 113 aa10.55□□□□□ -0.72
LAMB1-202ENST00000393559 SSX7Q7RTT5 188 aa10.55□□□□□ -0.72
LAMB1-202ENST00000393559 TMEM37Q8WXS4 190 aa10.55□□□□□ -0.72
LAMB1-202ENST00000393559 RCC1LQ96I51 464 aaKnown RBP10.55□□□□□ -0.72
LAMB1-202ENST00000393559 DNAJC4Q9NNZ3 241 aa10.55□□□□□ -0.72
LAMB1-202ENST00000393559 CTXND1A0A1B0GTU2 59 aa10.54□□□□□ -0.72
LAMB1-202ENST00000393559 A0A1W2PPV4 95 aa10.54□□□□□ -0.72
LAMB1-202ENST00000393559 SEC14L6B5MCN3 397 aa10.54□□□□□ -0.72
LAMB1-202ENST00000393559 GGCTO75223 188 aaKnown RBP10.54□□□□□ -0.72
LAMB1-202ENST00000393559 H2AFB1P0C5Y9 115 aa10.54□□□□□ -0.72
LAMB1-202ENST00000393559 RHOBP62745 196 aa10.54□□□□□ -0.72
LAMB1-202ENST00000393559 USF2Q15853 346 aaPredicted RBP10.54□□□□□ -0.72
LAMB1-202ENST00000393559 FAM78BQ5VT40 261 aa10.54□□□□□ -0.72
LAMB1-202ENST00000393559 C10orf113Q5VZT2 155 aa10.54□□□□□ -0.72
LAMB1-202ENST00000393559 LCN15Q6UWW0 184 aa10.54□□□□□ -0.72
LAMB1-202ENST00000393559 TOMM20LQ6UXN7 152 aa10.54□□□□□ -0.72
LAMB1-202ENST00000393559 GATAD1Q8WUU5 269 aa10.54□□□□□ -0.72
LAMB1-202ENST00000393559 RAB24Q969Q5 203 aa10.54□□□□□ -0.72
LAMB1-202ENST00000393559 RNF2Q99496 336 aa10.54□□□□□ -0.72
LAMB1-202ENST00000393559 CITED2Q99967 270 aaPredicted RBP10.54□□□□□ -0.72
LAMB1-202ENST00000393559 ZFAND3Q9H8U3 227 aa10.54□□□□□ -0.72
LAMB1-202ENST00000393559 SEPSECSQ9HD40 501 aaKnown RBP10.54□□□□□ -0.72
LAMB1-202ENST00000393559 AURKAIP1Q9NWT8 199 aaPredicted RBP10.54□□□□□ -0.72
LAMB1-202ENST00000393559 FUT9Q9Y231 359 aa10.54□□□□□ -0.72
LAMB1-202ENST00000393559 HIGD1AQ9Y241 93 aa10.54□□□□□ -0.72
LAMB1-202ENST00000393559 DNAH3Q8TD57 4116 aa10.53□□□□□ -0.72
LAMB1-202ENST00000393559 IGHV4OR15-8A0A075B7B6 117 aa10.53□□□□□ -0.72
LAMB1-202ENST00000393559 A0A087WW49 117 aa10.53□□□□□ -0.72
LAMB1-202ENST00000393559 ELOA3CA0A087WX78 387 aaPredicted RBP10.53□□□□□ -0.72
LAMB1-202ENST00000393559 A0A1B0GV50 99 aa10.53□□□□□ -0.72
LAMB1-202ENST00000393559 MAP1LC3B2A6NCE7 125 aa10.53□□□□□ -0.72
LAMB1-202ENST00000393559 NUDT19A8MXV4 375 aa10.53□□□□□ -0.72
LAMB1-202ENST00000393559 I3L521 148 aa10.53□□□□□ -0.72
LAMB1-202ENST00000393559 HMGB3O15347 200 aaKnown RBP10.53□□□□□ -0.72
LAMB1-202ENST00000393559 MIR17HGQ75NE6 70 aa10.53□□□□□ -0.72
LAMB1-202ENST00000393559 KLHL30-AS1Q8NEE0 82 aa10.53□□□□□ -0.72
LAMB1-202ENST00000393559 SFT2D1Q8WV19 159 aa10.53□□□□□ -0.72
LAMB1-202ENST00000393559 C4orf3Q8WVX3 66 aa10.53□□□□□ -0.72
LAMB1-202ENST00000393559 MBD3L1Q8WWY6 194 aa10.53□□□□□ -0.72
LAMB1-202ENST00000393559 UHRF2Q96PU4 802 aa10.53□□□□□ -0.72
LAMB1-202ENST00000393559 MRPL32Q9BYC8 188 aaKnown RBP10.53□□□□□ -0.72
LAMB1-202ENST00000393559 MAP1LC3BQ9GZQ8 125 aa10.53□□□□□ -0.72
LAMB1-202ENST00000393559 HRH4Q9H3N8 390 aa10.53□□□□□ -0.72
LAMB1-202ENST00000393559 MRPL27Q9P0M9 148 aaKnown RBP10.53□□□□□ -0.72
LAMB1-202ENST00000393559 IGHV3OR16-8A0A075B7F1 116 aa10.52□□□□□ -0.73
LAMB1-202ENST00000393559 NDUFA4O00483 81 aa10.52□□□□□ -0.73
LAMB1-202ENST00000393559 LINC00305Q7Z4B0 112 aa10.52□□□□□ -0.73
LAMB1-202ENST00000393559 C20orf24Q9BUV8 137 aa10.52□□□□□ -0.73
LAMB1-202ENST00000393559 TSSC4Q9Y5U2 329 aaPredicted RBP10.52□□□□□ -0.73
LAMB1-202ENST00000393559 A0A1W2PRX2 142 aa10.51□□□□□ -0.73
LAMB1-202ENST00000393559 HBE1P02100 147 aa10.51□□□□□ -0.73
LAMB1-202ENST00000393559 HSPB1P04792 205 aaKnown RBP10.51□□□□□ -0.73
LAMB1-202ENST00000393559 FGF8P55075 233 aaPredicted RBP10.51□□□□□ -0.73
LAMB1-202ENST00000393559 RPEL1Q2QD12 228 aa10.51□□□□□ -0.73
LAMB1-202ENST00000393559 DEFB136Q30KP8 78 aa10.51□□□□□ -0.73
LAMB1-202ENST00000393559 MORN5Q5VZ52 161 aa10.51□□□□□ -0.73
LAMB1-202ENST00000393559 OR4F17Q8NGA8 305 aa10.51□□□□□ -0.73
LAMB1-202ENST00000393559 OR4F4Q96R69 305 aa10.51□□□□□ -0.73
LAMB1-202ENST00000393559 SLC25A39Q9BZJ4 359 aaPredicted RBP10.51□□□□□ -0.73
LAMB1-202ENST00000393559 RABAC1Q9UI14 185 aa10.51□□□□□ -0.73
LAMB1-202ENST00000393559 TRAV5A0A0B4J249 113 aa10.5□□□□□ -0.73
LAMB1-202ENST00000393559 LINC01619G3V211 115 aa10.5□□□□□ -0.73
LAMB1-202ENST00000393559 H3BRN7 92 aa10.5□□□□□ -0.73
LAMB1-202ENST00000393559 TEX46H3BTG2 121 aa10.5□□□□□ -0.73
LAMB1-202ENST00000393559 STAG3L2P0CL84 134 aa10.5□□□□□ -0.73
LAMB1-202ENST00000393559 STAG3L3P0CL85 134 aa10.5□□□□□ -0.73
LAMB1-202ENST00000393559 C8orf88P0DMB2 117 aa10.5□□□□□ -0.73
LAMB1-202ENST00000393559 TAS2R45P59539 299 aa10.5□□□□□ -0.73
LAMB1-202ENST00000393559 FAM106AQ4KMX7 169 aa10.5□□□□□ -0.73
LAMB1-202ENST00000393559 UNQ9165/PRO28630Q6UXU0 137 aa10.5□□□□□ -0.73
LAMB1-202ENST00000393559 C8orf86Q6ZUL3 223 aa10.5□□□□□ -0.73
LAMB1-202ENST00000393559 TMEM190Q8WZ59 177 aa10.5□□□□□ -0.73
LAMB1-202ENST00000393559 SCRT1Q9BWW7 348 aa10.5□□□□□ -0.73
LAMB1-202ENST00000393559 TECRQ9NZ01 308 aaKnown RBP10.5□□□□□ -0.73
LAMB1-202ENST00000393559 TENM3Q9P273 2699 aa10.5□□□□□ -0.73
LAMB1-202ENST00000393559 TRAV1-1A0A0B4J248 108 aa10.49□□□□□ -0.73
LAMB1-202ENST00000393559 ZNF320A2RRD8 509 aa10.49□□□□□ -0.73
LAMB1-202ENST00000393559 ZNF207O43670 478 aaKnown RBP10.49□□□□□ -0.73
LAMB1-202ENST00000393559 ARL14EPLP0DKL9 152 aa10.49□□□□□ -0.73
LAMB1-202ENST00000393559 IGLL1P15814 213 aa10.49□□□□□ -0.73
LAMB1-202ENST00000393559 HOXD3P31249 432 aaPredicted RBP10.49□□□□□ -0.73
LAMB1-202ENST00000393559 CCL20P78556 96 aa10.49□□□□□ -0.73
LAMB1-202ENST00000393559 KHDC3LQ587J8 217 aa10.49□□□□□ -0.73
LAMB1-202ENST00000393559 LEMD1Q68G75 181 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms