RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 SAV1Q9H4B6 383 aaPredicted RBP13.1□□□□□ -0.31
PDLIM7-205ENST00000393551 PKHD1P08F94 4074 aa13.09□□□□□ -0.31
PDLIM7-205ENST00000393551 IGHV4-4A0A075B6R2 117 aa13.09□□□□□ -0.31
PDLIM7-205ENST00000393551 IGKV3-20P01619 116 aa13.09□□□□□ -0.31
PDLIM7-205ENST00000393551 FXYD7P58549 80 aa13.09□□□□□ -0.31
PDLIM7-205ENST00000393551 AP3S2P59780 193 aa13.09□□□□□ -0.31
PDLIM7-205ENST00000393551 NUTF2P61970 127 aaKnown RBP13.09□□□□□ -0.31
PDLIM7-205ENST00000393551 C1orf194Q5T5A4 169 aa13.09□□□□□ -0.31
PDLIM7-205ENST00000393551 TMEM182Q6ZP80 229 aaPredicted RBP13.09□□□□□ -0.31
PDLIM7-205ENST00000393551 LINC00052Q96N35 136 aa13.09□□□□□ -0.31
PDLIM7-205ENST00000393551 SLC25A21Q9BQT8 299 aaPredicted RBP13.09□□□□□ -0.31
PDLIM7-205ENST00000393551 TMED3Q9Y3Q3 217 aa13.09□□□□□ -0.31
PDLIM7-205ENST00000393551 ZNF705FA8MVS1 300 aaPredicted RBP13.08□□□□□ -0.32
PDLIM7-205ENST00000393551 SYNGR2O43760 224 aa13.08□□□□□ -0.32
PDLIM7-205ENST00000393551 HOXB5P09067 269 aa13.08□□□□□ -0.32
PDLIM7-205ENST00000393551 ZNF705DP0CH99 300 aaPredicted RBP13.08□□□□□ -0.32
PDLIM7-205ENST00000393551 ZNF705BP0CI00 300 aaPredicted RBP13.08□□□□□ -0.32
PDLIM7-205ENST00000393551 NUP62P37198 522 aaPredicted RBP13.08□□□□□ -0.32
PDLIM7-205ENST00000393551 PSMB3P49720 205 aa13.08□□□□□ -0.32
PDLIM7-205ENST00000393551 RAB11AP62491 216 aa13.08□□□□□ -0.32
PDLIM7-205ENST00000393551 PAIP2BQ9ULR5 123 aaKnown RBP13.08□□□□□ -0.32
PDLIM7-205ENST00000393551 PIGBOS1A0A0B4J2F0 54 aa13.07□□□□□ -0.32
PDLIM7-205ENST00000393551 F6UB75 175 aa13.07□□□□□ -0.32
PDLIM7-205ENST00000393551 WRBO00258 174 aa13.07□□□□□ -0.32
PDLIM7-205ENST00000393551 GATA2P23769 480 aaPredicted RBP13.07□□□□□ -0.32
PDLIM7-205ENST00000393551 GGNBP1Q5YKI7 109 aa13.07□□□□□ -0.32
PDLIM7-205ENST00000393551 FOXI2Q6ZQN5 318 aa13.07□□□□□ -0.32
PDLIM7-205ENST00000393551 DEDD2Q8WXF8 326 aa13.07□□□□□ -0.32
PDLIM7-205ENST00000393551 C20orf173Q96LM9 149 aa13.07□□□□□ -0.32
PDLIM7-205ENST00000393551 CLUHP3Q96NS8 147 aa13.07□□□□□ -0.32
PDLIM7-205ENST00000393551 NEU1Q99519 415 aa13.07□□□□□ -0.32
PDLIM7-205ENST00000393551 SLC35B3Q9H1N7 401 aa13.07□□□□□ -0.32
PDLIM7-205ENST00000393551 MED6O75586 246 aa13.06□□□□□ -0.32
PDLIM7-205ENST00000393551 FABP1P07148 127 aa13.06□□□□□ -0.32
PDLIM7-205ENST00000393551 ZNF846Q147U1 533 aa13.06□□□□□ -0.32
PDLIM7-205ENST00000393551 SPANXN2Q5MJ10 180 aa13.06□□□□□ -0.32
PDLIM7-205ENST00000393551 CENPSQ8N2Z9 138 aa13.06□□□□□ -0.32
PDLIM7-205ENST00000393551 RNF126Q9BV68 326 aa13.06□□□□□ -0.32
PDLIM7-205ENST00000393551 SRRQ9GZT4 340 aa13.06□□□□□ -0.32
PDLIM7-205ENST00000393551 PFDN2Q9UHV9 154 aa13.06□□□□□ -0.32
PDLIM7-205ENST00000393551 KIAA1109Q2LD37 5005 aa13.05□□□□□ -0.32
PDLIM7-205ENST00000393551 PKD1P98161 4303 aa13.05□□□□□ -0.32
PDLIM7-205ENST00000393551 DEFB131BA0A096LNP1 70 aa13.05□□□□□ -0.32
PDLIM7-205ENST00000393551 ID1P41134 155 aa13.05□□□□□ -0.32
PDLIM7-205ENST00000393551 PAX9P55771 341 aa13.05□□□□□ -0.32
PDLIM7-205ENST00000393551 OR8I2Q8N0Y5 310 aa13.05□□□□□ -0.32
PDLIM7-205ENST00000393551 CIB3Q96Q77 187 aaPredicted RBP13.05□□□□□ -0.32
PDLIM7-205ENST00000393551 SLC25A32Q9H2D1 315 aa13.05□□□□□ -0.32
PDLIM7-205ENST00000393551 ZNF98A6NK75 572 aa13.04□□□□□ -0.32
PDLIM7-205ENST00000393551 H3BP45 60 aa13.04□□□□□ -0.32
PDLIM7-205ENST00000393551 ISLRO14498 428 aa13.04□□□□□ -0.32
PDLIM7-205ENST00000393551 ADAP1O75689 374 aa13.04□□□□□ -0.32
PDLIM7-205ENST00000393551 AMBPP02760 352 aa13.04□□□□□ -0.32
PDLIM7-205ENST00000393551 ID3Q02535 119 aa13.04□□□□□ -0.32
PDLIM7-205ENST00000393551 BAK1Q16611 211 aa13.04□□□□□ -0.32
PDLIM7-205ENST00000393551 SPANXN5Q5MJ07 72 aa13.04□□□□□ -0.32
PDLIM7-205ENST00000393551 FAM78BQ5VT40 261 aa13.04□□□□□ -0.32
PDLIM7-205ENST00000393551 OR4B1Q8NGF8 309 aa13.04□□□□□ -0.32
PDLIM7-205ENST00000393551 COQ8AQ8NI60 647 aa13.04□□□□□ -0.32
PDLIM7-205ENST00000393551 PPP1R14BQ96C90 147 aa13.04□□□□□ -0.32
PDLIM7-205ENST00000393551 IGHV3OR16-12A0A075B7B8 117 aa13.03□□□□□ -0.32
PDLIM7-205ENST00000393551 A0A0J9YX75 114 aa13.03□□□□□ -0.32
PDLIM7-205ENST00000393551 C9orf170A2RU37 121 aa13.03□□□□□ -0.32
PDLIM7-205ENST00000393551 ACOT7LQ6ZUV0 252 aa13.03□□□□□ -0.32
PDLIM7-205ENST00000393551 C1orf158Q8N1D5 194 aa13.03□□□□□ -0.32
PDLIM7-205ENST00000393551 FLVCR2Q9UPI3 526 aa13.03□□□□□ -0.32
PDLIM7-205ENST00000393551 DYNC1H1Q14204 4646 aaKnown RBP13.02□□□□□ -0.33
PDLIM7-205ENST00000393551 PMS2P5A8MQ11 134 aa13.02□□□□□ -0.33
PDLIM7-205ENST00000393551 EMP1P54849 157 aa13.02□□□□□ -0.33
PDLIM7-205ENST00000393551 POLR2GP62487 172 aaKnown RBP eCLIP13.02□□□□□ -0.33
PDLIM7-205ENST00000393551 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.02□□□□□ -0.33
PDLIM7-205ENST00000393551 SDHCQ99643 169 aaPredicted RBP13.02□□□□□ -0.33
PDLIM7-205ENST00000393551 RSG1Q9BU20 258 aa13.02□□□□□ -0.33
PDLIM7-205ENST00000393551 SLC25A22Q9H936 323 aa13.02□□□□□ -0.33
PDLIM7-205ENST00000393551 PLA2G2EQ9NZK7 142 aa13.02□□□□□ -0.33
PDLIM7-205ENST00000393551 SLC45A2Q9UMX9 530 aa13.02□□□□□ -0.33
PDLIM7-205ENST00000393551 SMIM9A6NGZ8 99 aa13.01□□□□□ -0.33
PDLIM7-205ENST00000393551 A8MTW9 85 aa13.01□□□□□ -0.33
PDLIM7-205ENST00000393551 CCNKO75909 580 aa13.01□□□□□ -0.33
PDLIM7-205ENST00000393551 NDUFB6O95139 128 aa13.01□□□□□ -0.33
PDLIM7-205ENST00000393551 CFDP00746 253 aaPredicted RBP13.01□□□□□ -0.33
PDLIM7-205ENST00000393551 ORM2P19652 201 aa13.01□□□□□ -0.33
PDLIM7-205ENST00000393551 UBE2MP61081 183 aaKnown RBP13.01□□□□□ -0.33
PDLIM7-205ENST00000393551 RPP30P78346 268 aaKnown RBP13.01□□□□□ -0.33
PDLIM7-205ENST00000393551 PSG9Q00887 426 aa13.01□□□□□ -0.33
PDLIM7-205ENST00000393551 SPATA31B1PQ5VZV4 182 aa13.01□□□□□ -0.33
PDLIM7-205ENST00000393551 IGFL4Q6B9Z1 124 aa13.01□□□□□ -0.33
PDLIM7-205ENST00000393551 AMTNQ6UX39 209 aa13.01□□□□□ -0.33
PDLIM7-205ENST00000393551 DKK2Q9UBU2 259 aa13.01□□□□□ -0.33
PDLIM7-205ENST00000393551 STRAPQ9Y3F4 350 aaKnown RBP13.01□□□□□ -0.33
PDLIM7-205ENST00000393551 TRAV8-2A0A0B4J237 113 aa13□□□□□ -0.33
PDLIM7-205ENST00000393551 SPART-AS1P0CW21 52 aa13□□□□□ -0.33
PDLIM7-205ENST00000393551 BTCP35070 178 aa13□□□□□ -0.33
PDLIM7-205ENST00000393551 GALR1P47211 349 aa13□□□□□ -0.33
PDLIM7-205ENST00000393551 AKR1C1Q04828 323 aa13□□□□□ -0.33
PDLIM7-205ENST00000393551 TMEM144Q7Z5S9 345 aa13□□□□□ -0.33
PDLIM7-205ENST00000393551 BPIFCQ8NFQ6 507 aa13□□□□□ -0.33
PDLIM7-205ENST00000393551 OR4D5Q8NGN0 318 aa13□□□□□ -0.33
PDLIM7-205ENST00000393551 C16orf92Q96LL3 132 aa13□□□□□ -0.33
PDLIM7-205ENST00000393551 KRTAP17-1Q9BYP8 105 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms