RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 TEX22C9J3V5 150 aa15.02■□□□□ -0
CBX1-202ENST00000393408 P01737 135 aa15.02■□□□□ -0
CBX1-202ENST00000393408 BTF3P20290 206 aaKnown RBP15.02■□□□□ -0
CBX1-202ENST00000393408 SOX21Q9Y651 276 aaPredicted RBP15.02■□□□□ -0
CBX1-202ENST00000393408 PRR31Q5SQ13 230 aa15.02□□□□□ -0.01
CBX1-202ENST00000393408 MALRD1Q5VYJ5 2156 aa15.02□□□□□ -0.01
CBX1-202ENST00000393408 HIGD1AQ9Y241 93 aa15.02□□□□□ -0.01
CBX1-202ENST00000393408 IGHV1-3A0A0C4DH29 117 aa15.01□□□□□ -0.01
CBX1-202ENST00000393408 IGHV1-69-2A0A0G2JMI3 117 aa15.01□□□□□ -0.01
CBX1-202ENST00000393408 LAMTOR2Q9Y2Q5 125 aa15.01□□□□□ -0.01
CBX1-202ENST00000393408 ZNF318Q5VUA4 2279 aa15.01□□□□□ -0.01
CBX1-202ENST00000393408 PPP1R27Q86WC6 154 aa15.01□□□□□ -0.01
CBX1-202ENST00000393408 RBM14Q96PK6 669 aaKnown RBP15.01□□□□□ -0.01
CBX1-202ENST00000393408 GFRA4Q9GZZ7 299 aa15.01□□□□□ -0.01
CBX1-202ENST00000393408 ZNF835Q9Y2P0 537 aa15.01□□□□□ -0.01
CBX1-202ENST00000393408 INSIG2Q9Y5U4 225 aa15.01□□□□□ -0.01
CBX1-202ENST00000393408 AKAP13Q12802 2813 aa15□□□□□ -0.01
CBX1-202ENST00000393408 TRAV9-2A0A087WT02 112 aa15□□□□□ -0.01
CBX1-202ENST00000393408 IGLC1P0CG04 106 aa15□□□□□ -0.01
CBX1-202ENST00000393408 PRB3Q04118 309 aaPredicted RBP15□□□□□ -0.01
CBX1-202ENST00000393408 Q56UQ5 140 aa15□□□□□ -0.01
CBX1-202ENST00000393408 GFRALQ6UXV0 394 aa15□□□□□ -0.01
CBX1-202ENST00000393408 STPG4Q8N801 248 aa15□□□□□ -0.01
CBX1-202ENST00000393408 PGLYRP4Q96LB8 373 aa15□□□□□ -0.01
CBX1-202ENST00000393408 PSG1P11464 419 aa15□□□□□ -0.01
CBX1-202ENST00000393408 Q86TA4 180 aa15□□□□□ -0.01
CBX1-202ENST00000393408 KIR3DL3Q8N743 410 aa15□□□□□ -0.01
CBX1-202ENST00000393408 ABHD17AQ96GS6 310 aa15□□□□□ -0.01
CBX1-202ENST00000393408 OTORQ9NRC9 128 aa15□□□□□ -0.01
CBX1-202ENST00000393408 RALYQ9UKM9 306 aaKnown RBP15□□□□□ -0.01
CBX1-202ENST00000393408 ZFP30Q9Y2G7 519 aa15□□□□□ -0.01
CBX1-202ENST00000393408 PCNX1Q96RV3 2341 aa14.99□□□□□ -0.01
CBX1-202ENST00000393408 BUB1B-PAK6H3BSN5 160 aa14.99□□□□□ -0.01
CBX1-202ENST00000393408 FAM120AOSQ5T036 256 aa14.99□□□□□ -0.01
CBX1-202ENST00000393408 FAM162BQ5T6X4 162 aa14.99□□□□□ -0.01
CBX1-202ENST00000393408 RBPMS2Q6ZRY4 209 aaKnown RBP14.99□□□□□ -0.01
CBX1-202ENST00000393408 Q8NA96 180 aa14.99□□□□□ -0.01
CBX1-202ENST00000393408 TMEM14CQ9P0S9 112 aa14.99□□□□□ -0.01
CBX1-202ENST00000393408 NPIPB6E9PJ23 425 aa14.98□□□□□ -0.01
CBX1-202ENST00000393408 TSPOP30536 169 aa14.98□□□□□ -0.01
CBX1-202ENST00000393408 LYZP61626 148 aa14.98□□□□□ -0.01
CBX1-202ENST00000393408 SPATA12Q7Z6I5 190 aa14.98□□□□□ -0.01
CBX1-202ENST00000393408 DAZAP1Q96EP5 407 aaKnown RBP14.98□□□□□ -0.01
CBX1-202ENST00000393408 C20orf202A1L168 122 aa14.98□□□□□ -0.01
CBX1-202ENST00000393408 LINC00614P0C842 121 aa14.98□□□□□ -0.01
CBX1-202ENST00000393408 FOXA3P55318 350 aaPredicted RBP14.98□□□□□ -0.01
CBX1-202ENST00000393408 CYB5R2Q6BCY4 276 aa14.98□□□□□ -0.01
CBX1-202ENST00000393408 SLC25A39Q9BZJ4 359 aaPredicted RBP14.98□□□□□ -0.01
CBX1-202ENST00000393408 NGBQ9NPG2 151 aa14.98□□□□□ -0.01
CBX1-202ENST00000393408 TRAV8-1A0A0A6YYK1 113 aa14.97□□□□□ -0.01
CBX1-202ENST00000393408 I3L2K1 104 aa14.97□□□□□ -0.01
CBX1-202ENST00000393408 CD24P25063 80 aa14.97□□□□□ -0.01
CBX1-202ENST00000393408 FBXL15Q9H469 300 aa14.97□□□□□ -0.01
CBX1-202ENST00000393408 CLEC5AQ9NY25 188 aa14.97□□□□□ -0.01
CBX1-202ENST00000393408 MRPS16Q9Y3D3 137 aaKnown RBP14.97□□□□□ -0.01
CBX1-202ENST00000393408 FAM231BA6NCW3 169 aa14.97□□□□□ -0.01
CBX1-202ENST00000393408 IGLV2-11P01706 119 aa14.97□□□□□ -0.01
CBX1-202ENST00000393408 SRSF12Q8WXF0 261 aaKnown RBP14.97□□□□□ -0.01
CBX1-202ENST00000393408 BSNQ9UPA5 3926 aa14.97□□□□□ -0.01
CBX1-202ENST00000393408 MAP1BP46821 2468 aaKnown RBP14.97□□□□□ -0.01
CBX1-202ENST00000393408 SH2D7A6NKC9 451 aaPredicted RBP14.96□□□□□ -0.01
CBX1-202ENST00000393408 M0QZ24 198 aa14.96□□□□□ -0.01
CBX1-202ENST00000393408 NDUFB8O95169 186 aa14.96□□□□□ -0.01
CBX1-202ENST00000393408 HOXB4P17483 251 aaPredicted RBP14.96□□□□□ -0.01
CBX1-202ENST00000393408 RBPJQ06330 500 aa14.96□□□□□ -0.01
CBX1-202ENST00000393408 CIARTQ8N365 385 aaPredicted RBP14.96□□□□□ -0.01
CBX1-202ENST00000393408 CHCHD1Q96BP2 118 aaKnown RBP14.96□□□□□ -0.01
CBX1-202ENST00000393408 TMEM70Q9BUB7 260 aa14.96□□□□□ -0.01
CBX1-202ENST00000393408 IGLL1P15814 213 aa14.96□□□□□ -0.01
CBX1-202ENST00000393408 APOBEC3AP31941 199 aaPredicted RBP14.96□□□□□ -0.01
CBX1-202ENST00000393408 EXOC3-AS1Q8N2X6 119 aa14.96□□□□□ -0.01
CBX1-202ENST00000393408 ZNF292O60281 2723 aa14.96□□□□□ -0.02
CBX1-202ENST00000393408 ANKRD11Q6UB99 2663 aaPredicted RBP14.96□□□□□ -0.02
CBX1-202ENST00000393408 KALRNO60229 2985 aa14.96□□□□□ -0.02
CBX1-202ENST00000393408 C16orf54Q6UWD8 224 aa14.95□□□□□ -0.02
CBX1-202ENST00000393408 IGHV1-24A0A0C4DH33 117 aa14.95□□□□□ -0.02
CBX1-202ENST00000393408 GOLT1AQ6ZVE7 132 aa14.95□□□□□ -0.02
CBX1-202ENST00000393408 Q71RC1 249 aaPredicted RBP14.95□□□□□ -0.02
CBX1-202ENST00000393408 RASL11BQ9BPW5 248 aa14.95□□□□□ -0.02
CBX1-202ENST00000393408 LOC102724200A0A096LPH7 203 aaPredicted RBP14.94□□□□□ -0.02
CBX1-202ENST00000393408 B9A039 149 aa14.94□□□□□ -0.02
CBX1-202ENST00000393408 LYNX1G3V0Z9 82 aa14.94□□□□□ -0.02
CBX1-202ENST00000393408 CRXO43186 299 aaPredicted RBP14.94□□□□□ -0.02
CBX1-202ENST00000393408 IGKV1-17P01599 117 aa14.94□□□□□ -0.02
CBX1-202ENST00000393408 LYNX1P0DP58 116 aa14.94□□□□□ -0.02
CBX1-202ENST00000393408 COX7A1P24310 79 aa14.94□□□□□ -0.02
CBX1-202ENST00000393408 COL8A1P27658 744 aa14.94□□□□□ -0.02
CBX1-202ENST00000393408 RPEQ96AT9 228 aa14.94□□□□□ -0.02
CBX1-202ENST00000393408 C1RLQ9NZP8 487 aa14.94□□□□□ -0.02
CBX1-202ENST00000393408 ADGRG4Q8IZF6 3080 aa14.94□□□□□ -0.02
CBX1-202ENST00000393408 TRBV6-1A0A0K0K1D8 114 aa14.94□□□□□ -0.02
CBX1-202ENST00000393408 OVOL3O00110 214 aa14.94□□□□□ -0.02
CBX1-202ENST00000393408 APOHP02749 345 aaPredicted RBP14.94□□□□□ -0.02
CBX1-202ENST00000393408 RBP4P02753 201 aa14.94□□□□□ -0.02
CBX1-202ENST00000393408 PRNTQ86SH4 94 aa14.94□□□□□ -0.02
CBX1-202ENST00000393408 NDFIP1Q9BT67 221 aa14.94□□□□□ -0.02
CBX1-202ENST00000393408 ZNF785A8K8V0 405 aa14.93□□□□□ -0.02
CBX1-202ENST00000393408 LY6LH3BQJ8 138 aa14.93□□□□□ -0.02
CBX1-202ENST00000393408 HAX1O00165 279 aa14.93□□□□□ -0.02
CBX1-202ENST00000393408 CHEK1O14757 476 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms