RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 ADMP35318 185 aa8.38□□□□□ -1.07
PDGFD-202ENST00000393158 VAMP3Q15836 100 aa8.38□□□□□ -1.07
PDGFD-202ENST00000393158 C16orf82Q7Z2V1 217 aa8.38□□□□□ -1.07
PDGFD-202ENST00000393158 TMEM144Q7Z5S9 345 aa8.38□□□□□ -1.07
PDGFD-202ENST00000393158 TMEM37Q8WXS4 190 aa8.38□□□□□ -1.07
PDGFD-202ENST00000393158 PINX1Q96BK5 328 aaKnown RBP8.38□□□□□ -1.07
PDGFD-202ENST00000393158 KLK15Q9H2R5 256 aa8.38□□□□□ -1.07
PDGFD-202ENST00000393158 KIAA1456Q9P272 454 aa8.38□□□□□ -1.07
PDGFD-202ENST00000393158 GATA2P23769 480 aaPredicted RBP8.38□□□□□ -1.07
PDGFD-202ENST00000393158 ZNF266Q14584 549 aa8.38□□□□□ -1.07
PDGFD-202ENST00000393158 ATP6V1FQ16864 119 aa8.38□□□□□ -1.07
PDGFD-202ENST00000393158 TCTEX1D4Q5JR98 221 aa8.38□□□□□ -1.07
PDGFD-202ENST00000393158 CACNG8Q8WXS5 425 aa8.38□□□□□ -1.07
PDGFD-202ENST00000393158 MT-CO2P00403 227 aa8.37□□□□□ -1.07
PDGFD-202ENST00000393158 PSMB8P28062 276 aa8.37□□□□□ -1.07
PDGFD-202ENST00000393158 FCGR2BP31994 310 aaPredicted RBP8.37□□□□□ -1.07
PDGFD-202ENST00000393158 DUX5Q96PT3 197 aa8.37□□□□□ -1.07
PDGFD-202ENST00000393158 IGHV3-21A0A0B4J1V1 117 aa8.37□□□□□ -1.07
PDGFD-202ENST00000393158 C9JQL5 133 aa8.37□□□□□ -1.07
PDGFD-202ENST00000393158 HBG1P69891 147 aa8.37□□□□□ -1.07
PDGFD-202ENST00000393158 HBG2P69892 147 aa8.37□□□□□ -1.07
PDGFD-202ENST00000393158 CITED1Q99966 193 aa8.37□□□□□ -1.07
PDGFD-202ENST00000393158 CLDN34H7C241 214 aa8.37□□□□□ -1.07
PDGFD-202ENST00000393158 H2AFB1P0C5Y9 115 aa8.37□□□□□ -1.07
PDGFD-202ENST00000393158 RNF152Q8N8N0 203 aa8.37□□□□□ -1.07
PDGFD-202ENST00000393158 PAM16Q9Y3D7 125 aa8.37□□□□□ -1.07
PDGFD-202ENST00000393158 HOXA5P20719 270 aa8.36□□□□□ -1.07
PDGFD-202ENST00000393158 C15orf54Q8N8G6 183 aa8.36□□□□□ -1.07
PDGFD-202ENST00000393158 SEC14L6B5MCN3 397 aa8.36□□□□□ -1.07
PDGFD-202ENST00000393158 DFFBO76075 338 aa8.36□□□□□ -1.07
PDGFD-202ENST00000393158 OPRK1P41145 380 aa8.36□□□□□ -1.07
PDGFD-202ENST00000393158 RPL19P84098 196 aaKnown RBP8.36□□□□□ -1.07
PDGFD-202ENST00000393158 OR4X1Q8NH49 305 aa8.36□□□□□ -1.07
PDGFD-202ENST00000393158 ZNF502Q8TBZ5 544 aa8.36□□□□□ -1.07
PDGFD-202ENST00000393158 RASL11BQ9BPW5 248 aa8.36□□□□□ -1.07
PDGFD-202ENST00000393158 NPVFQ9HCQ7 196 aa8.36□□□□□ -1.07
PDGFD-202ENST00000393158 SEPSECSQ9HD40 501 aaKnown RBP8.36□□□□□ -1.07
PDGFD-202ENST00000393158 S4R3C0 116 aa8.36□□□□□ -1.07
PDGFD-202ENST00000393158 CTSGP08311 255 aa8.36□□□□□ -1.07
PDGFD-202ENST00000393158 ERHP84090 104 aaKnown RBP8.36□□□□□ -1.07
PDGFD-202ENST00000393158 MIC13Q5XKP0 118 aa8.36□□□□□ -1.07
PDGFD-202ENST00000393158 OR5T1Q8NG75 326 aa8.36□□□□□ -1.07
PDGFD-202ENST00000393158 OR2D3Q8NGH3 330 aa8.36□□□□□ -1.07
PDGFD-202ENST00000393158 RAB24Q969Q5 203 aa8.36□□□□□ -1.07
PDGFD-202ENST00000393158 C1RLQ9NZP8 487 aa8.36□□□□□ -1.07
PDGFD-202ENST00000393158 HIVEP2P31629 2446 aa8.36□□□□□ -1.07
PDGFD-202ENST00000393158 LCNL1Q6ZST4 164 aa8.35□□□□□ -1.07
PDGFD-202ENST00000393158 NPIPB3Q92617 1050 aa8.35□□□□□ -1.07
PDGFD-202ENST00000393158 PARP11Q9NR21 331 aa8.35□□□□□ -1.07
PDGFD-202ENST00000393158 SETD2Q9BYW2 2564 aaPredicted RBP8.35□□□□□ -1.07
PDGFD-202ENST00000393158 TRBV12-3P01733 135 aa8.35□□□□□ -1.07
PDGFD-202ENST00000393158 CAMLGP49069 296 aa8.35□□□□□ -1.07
PDGFD-202ENST00000393158 PLGLAQ15195 96 aa8.35□□□□□ -1.07
PDGFD-202ENST00000393158 GUK1Q16774 197 aa8.35□□□□□ -1.07
PDGFD-202ENST00000393158 SPATA31B1PQ5VZV4 182 aa8.35□□□□□ -1.07
PDGFD-202ENST00000393158 COMMD1Q8N668 190 aa8.35□□□□□ -1.07
PDGFD-202ENST00000393158 OR5R1Q8NH85 324 aa8.35□□□□□ -1.07
PDGFD-202ENST00000393158 ABHD5Q8WTS1 349 aa8.35□□□□□ -1.07
PDGFD-202ENST00000393158 CHRDL1Q9BU40 450 aa8.35□□□□□ -1.07
PDGFD-202ENST00000393158 SERTM2A0A1B0GWG4 89 aa8.35□□□□□ -1.07
PDGFD-202ENST00000393158 CLPSL1A2RUU4 121 aa8.35□□□□□ -1.07
PDGFD-202ENST00000393158 INAFM1C9JVW0 142 aa8.35□□□□□ -1.07
PDGFD-202ENST00000393158 CST9LP1Q5W188 147 aa8.35□□□□□ -1.07
PDGFD-202ENST00000393158 Q71RC1 249 aaPredicted RBP8.35□□□□□ -1.07
PDGFD-202ENST00000393158 EIF4E3Q8N5X7 224 aaKnown RBP8.35□□□□□ -1.07
PDGFD-202ENST00000393158 FAM167A-AS1Q96KT0 104 aa8.35□□□□□ -1.07
PDGFD-202ENST00000393158 CNIH1O95406 144 aa8.34□□□□□ -1.07
PDGFD-202ENST00000393158 LINC00614P0C842 121 aa8.34□□□□□ -1.07
PDGFD-202ENST00000393158 HIST2H2BDQ6DRA6 164 aa8.34□□□□□ -1.07
PDGFD-202ENST00000393158 TMEM86BQ8N661 226 aa8.34□□□□□ -1.07
PDGFD-202ENST00000393158 YAE1D1Q9NRH1 226 aa8.34□□□□□ -1.07
PDGFD-202ENST00000393158 TRAV41A0A0B4J266 112 aa8.34□□□□□ -1.07
PDGFD-202ENST00000393158 SERF2P84101 59 aa8.34□□□□□ -1.07
PDGFD-202ENST00000393158 TEPPQ6URK8 271 aa8.34□□□□□ -1.07
PDGFD-202ENST00000393158 C2CD3Q4AC94 2353 aa8.34□□□□□ -1.07
PDGFD-202ENST00000393158 CCL25O15444 150 aa8.34□□□□□ -1.07
PDGFD-202ENST00000393158 IGHG4P01861 327 aa8.34□□□□□ -1.07
PDGFD-202ENST00000393158 RAB11AP62491 216 aa8.34□□□□□ -1.07
PDGFD-202ENST00000393158 Q6ZSV7 163 aa8.34□□□□□ -1.07
PDGFD-202ENST00000393158 MBD3L1Q8WWY6 194 aa8.34□□□□□ -1.07
PDGFD-202ENST00000393158 TRAV1-1A0A0B4J248 108 aa8.33□□□□□ -1.08
PDGFD-202ENST00000393158 TCRBV4S1A1TA0A5B7 111 aa8.33□□□□□ -1.08
PDGFD-202ENST00000393158 MRPS12O15235 138 aaKnown RBP8.33□□□□□ -1.08
PDGFD-202ENST00000393158 RND2P52198 227 aa8.33□□□□□ -1.08
PDGFD-202ENST00000393158 PLP1P60201 277 aa8.33□□□□□ -1.08
PDGFD-202ENST00000393158 SAT2Q96F10 170 aaPredicted RBP8.33□□□□□ -1.08
PDGFD-202ENST00000393158 ZFAND3Q9H8U3 227 aa8.33□□□□□ -1.08
PDGFD-202ENST00000393158 TNFRSF19Q9NS68 423 aa8.33□□□□□ -1.08
PDGFD-202ENST00000393158 UMAD1C9J7I0 102 aa8.33□□□□□ -1.08
PDGFD-202ENST00000393158 M0QZK8 103 aa8.33□□□□□ -1.08
PDGFD-202ENST00000393158 MPDU1O75352 247 aa8.33□□□□□ -1.08
PDGFD-202ENST00000393158 STAG3L3P0CL85 134 aa8.33□□□□□ -1.08
PDGFD-202ENST00000393158 HILS1P60008 231 aa8.33□□□□□ -1.08
PDGFD-202ENST00000393158 SLAQ13239 276 aa8.33□□□□□ -1.08
PDGFD-202ENST00000393158 ECSCRQ19T08 205 aa8.33□□□□□ -1.08
PDGFD-202ENST00000393158 RNF141Q8WVD5 230 aa8.33□□□□□ -1.08
PDGFD-202ENST00000393158 TRGV9Q99603 122 aa8.33□□□□□ -1.08
PDGFD-202ENST00000393158 WI2-2373I1.2A0A1W2PRP0 233 aa8.33□□□□□ -1.08
PDGFD-202ENST00000393158 IGHV3-23P01764 117 aa8.33□□□□□ -1.08
PDGFD-202ENST00000393158 KRTAP10-3P60369 221 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms