RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 ORMDL3Q8N138 153 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 TMEM101Q96IK0 257 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 KIR2DL4Q99706 377 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 SLC25A10Q9UBX3 287 aaPredicted RBP6.27□□□□□ -1.41
VTI1A-201ENST00000393077 ROS1P08922 2347 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 IGHV3-43A0A0B4J1X8 118 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 IFI6P09912 130 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 IGHV3-43DP0DP04 118 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 EDDM3AQ14507 147 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 FAM168AQ92567 244 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 ZNF488Q96MN9 340 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 TMEM30CPA0ZSE6 113 aa6.26□□□□□ -1.41
VTI1A-201ENST00000393077 LINC01549A6NIU2 74 aa6.26□□□□□ -1.41
VTI1A-201ENST00000393077 TNFRSF6BO95407 300 aa6.26□□□□□ -1.41
VTI1A-201ENST00000393077 ERHP84090 104 aaKnown RBP6.26□□□□□ -1.41
VTI1A-201ENST00000393077 IL11RAQ14626 422 aa6.26□□□□□ -1.41
VTI1A-201ENST00000393077 SLC25A47Q6Q0C1 308 aa6.26□□□□□ -1.41
VTI1A-201ENST00000393077 LYZL4Q96KX0 146 aa6.26□□□□□ -1.41
VTI1A-201ENST00000393077 LINC00479Q96M42 142 aa6.26□□□□□ -1.41
VTI1A-201ENST00000393077 CSDC2Q9Y534 153 aaKnown RBP6.26□□□□□ -1.41
VTI1A-201ENST00000393077 PLXNA4Q9HCM2 1894 aa6.26□□□□□ -1.41
VTI1A-201ENST00000393077 USF3Q68DE3 2245 aa6.26□□□□□ -1.41
VTI1A-201ENST00000393077 A0A1W2PQD3 144 aa6.26□□□□□ -1.41
VTI1A-201ENST00000393077 CRXO43186 299 aaPredicted RBP6.26□□□□□ -1.41
VTI1A-201ENST00000393077 ATP5LO75964 103 aa6.26□□□□□ -1.41
VTI1A-201ENST00000393077 PLAUP00749 431 aa6.26□□□□□ -1.41
VTI1A-201ENST00000393077 IGLV3-19P01714 112 aa6.26□□□□□ -1.41
VTI1A-201ENST00000393077 CCL11P51671 97 aa6.26□□□□□ -1.41
VTI1A-201ENST00000393077 SPATA46Q5T0L3 261 aa6.26□□□□□ -1.41
VTI1A-201ENST00000393077 HIGD1AQ9Y241 93 aa6.26□□□□□ -1.41
VTI1A-201ENST00000393077 E9PLD3 99 aa6.26□□□□□ -1.41
VTI1A-201ENST00000393077 COX6CP09669 75 aa6.26□□□□□ -1.41
VTI1A-201ENST00000393077 ZNF718Q3SXZ3 478 aa6.26□□□□□ -1.41
VTI1A-201ENST00000393077 ASPHD1Q5U4P2 390 aa6.26□□□□□ -1.41
VTI1A-201ENST00000393077 OR9G1Q8NH87 305 aa6.26□□□□□ -1.41
VTI1A-201ENST00000393077 MGST2Q99735 147 aa6.26□□□□□ -1.41
VTI1A-201ENST00000393077 ABCA1O95477 2261 aa6.25□□□□□ -1.41
VTI1A-201ENST00000393077 IGKV1-12A0A0C4DH73 117 aa6.25□□□□□ -1.41
VTI1A-201ENST00000393077 TGFBR3LH3BV60 316 aa6.25□□□□□ -1.41
VTI1A-201ENST00000393077 M0R3E3 92 aa6.25□□□□□ -1.41
VTI1A-201ENST00000393077 NDUFA3O95167 84 aa6.25□□□□□ -1.41
VTI1A-201ENST00000393077 IGKV1D-12P01611 117 aa6.25□□□□□ -1.41
VTI1A-201ENST00000393077 IFI27P40305 119 aaPredicted RBP6.25□□□□□ -1.41
VTI1A-201ENST00000393077 PMVKQ15126 192 aa6.25□□□□□ -1.41
VTI1A-201ENST00000393077 FLVCR1-AS1Q8TAF5 88 aa6.25□□□□□ -1.41
VTI1A-201ENST00000393077 SAP25Q8TEE9 199 aa6.25□□□□□ -1.41
VTI1A-201ENST00000393077 GRPP07492 148 aa6.25□□□□□ -1.41
VTI1A-201ENST00000393077 INTS1Q8N201 2190 aaKnown RBP6.25□□□□□ -1.41
VTI1A-201ENST00000393077 TRBV25-1A0A075B6N4 114 aa6.25□□□□□ -1.41
VTI1A-201ENST00000393077 GGTLC3B5MD39 225 aa6.25□□□□□ -1.41
VTI1A-201ENST00000393077 MRPL33O75394 65 aaKnown RBP6.25□□□□□ -1.41
VTI1A-201ENST00000393077 RAXQ9Y2V3 346 aa6.25□□□□□ -1.41
VTI1A-201ENST00000393077 NPIPB13A6NJU9 1138 aa6.24□□□□□ -1.41
VTI1A-201ENST00000393077 C17orf98A8MV24 154 aa6.24□□□□□ -1.41
VTI1A-201ENST00000393077 NPIPB4C9JG80 1138 aa6.24□□□□□ -1.41
VTI1A-201ENST00000393077 NPFFO15130 113 aa6.24□□□□□ -1.41
VTI1A-201ENST00000393077 CXCL13O43927 109 aa6.24□□□□□ -1.41
VTI1A-201ENST00000393077 CELA2AP08217 269 aa6.24□□□□□ -1.41
VTI1A-201ENST00000393077 ACP1P24666 158 aa6.24□□□□□ -1.41
VTI1A-201ENST00000393077 DNAJC30Q96LL9 226 aa6.24□□□□□ -1.41
VTI1A-201ENST00000393077 DUX5Q96PT3 197 aa6.24□□□□□ -1.41
VTI1A-201ENST00000393077 TCF19Q9Y242 345 aa6.24□□□□□ -1.41
VTI1A-201ENST00000393077 KIF26AQ9ULI4 1882 aaPredicted RBP6.24□□□□□ -1.41
VTI1A-201ENST00000393077 C5orf63A6NC05 138 aa6.24□□□□□ -1.41
VTI1A-201ENST00000393077 FOXI3A8MTJ6 420 aaPredicted RBP6.24□□□□□ -1.41
VTI1A-201ENST00000393077 LEPP41159 167 aa6.24□□□□□ -1.41
VTI1A-201ENST00000393077 PLGLAQ15195 96 aa6.24□□□□□ -1.41
VTI1A-201ENST00000393077 CNEP1R1Q8N9A8 125 aa6.24□□□□□ -1.41
VTI1A-201ENST00000393077 ICE1Q9Y2F5 2266 aa6.24□□□□□ -1.41
VTI1A-201ENST00000393077 DLX1P56177 255 aa6.24□□□□□ -1.41
VTI1A-201ENST00000393077 TAL2Q16559 108 aa6.24□□□□□ -1.41
VTI1A-201ENST00000393077 DEFB124Q8NES8 71 aa6.24□□□□□ -1.41
VTI1A-201ENST00000393077 MRPL32Q9BYC8 188 aaKnown RBP6.24□□□□□ -1.41
VTI1A-201ENST00000393077 DLL3Q9NYJ7 618 aa6.24□□□□□ -1.41
VTI1A-201ENST00000393077 PLXNB3Q9ULL4 1909 aa6.24□□□□□ -1.41
VTI1A-201ENST00000393077 RHODO00212 210 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 IGHV4-39P01824 125 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 FKBP2P26885 142 aaKnown RBP6.23□□□□□ -1.41
VTI1A-201ENST00000393077 NPIPB3Q92617 1050 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 PRADC1Q9BSG0 188 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 TM2D2Q9BX73 214 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 TTTY13Q9BZ97 58 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 SPANXCQ9NY87 97 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 DOCK7Q96N67 2140 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 OOEPA6NGQ2 149 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 K7ESF4 209 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 SLC25A20O43772 301 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 IGKV1-39P01597 117 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 IGKV1D-39P04432 117 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 ZNF415Q09FC8 603 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 PCSK4Q6UW60 755 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 VKORC1Q9BQB6 163 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 DEFB127Q9H1M4 99 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 POLEQ07864 2286 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 D6R8Y8 96 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 FOXC1Q12948 553 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 SP5Q6BEB4 398 aaPredicted RBP6.23□□□□□ -1.41
VTI1A-201ENST00000393077 FAM231DQ6ZW35 169 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 MOGAT3Q86VF5 341 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 FOXB1Q99853 325 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms