RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 CCDC160A6NGH7 325 aa11.89□□□□□ -0.51
PTPRK-208ENST00000392449 SNRPGP15A8MWD9 76 aa11.89□□□□□ -0.51
PTPRK-208ENST00000392449 PRSS46E5RG02 174 aa11.89□□□□□ -0.51
PTPRK-208ENST00000392449 SFT2D2O95562 160 aa11.89□□□□□ -0.51
PTPRK-208ENST00000392449 GATA2P23769 480 aaPredicted RBP11.89□□□□□ -0.51
PTPRK-208ENST00000392449 ATP5IP56385 69 aaPredicted RBP11.89□□□□□ -0.51
PTPRK-208ENST00000392449 RAB11AP62491 216 aa11.89□□□□□ -0.51
PTPRK-208ENST00000392449 ZNF705AQ6ZN79 300 aaPredicted RBP11.89□□□□□ -0.51
PTPRK-208ENST00000392449 TMEM182Q6ZP80 229 aaPredicted RBP11.89□□□□□ -0.51
PTPRK-208ENST00000392449 ZNF709Q8N972 641 aa11.89□□□□□ -0.51
PTPRK-208ENST00000392449 THAP8Q8NA92 274 aa11.89□□□□□ -0.51
PTPRK-208ENST00000392449 OR4B1Q8NGF8 309 aa11.89□□□□□ -0.51
PTPRK-208ENST00000392449 COQ8AQ8NI60 647 aa11.89□□□□□ -0.51
PTPRK-208ENST00000392449 C20orf173Q96LM9 149 aa11.89□□□□□ -0.51
PTPRK-208ENST00000392449 NUP62P37198 522 aaPredicted RBP11.89□□□□□ -0.51
PTPRK-208ENST00000392449 PSMB3P49720 205 aa11.89□□□□□ -0.51
PTPRK-208ENST00000392449 GGNBP1Q5YKI7 109 aa11.89□□□□□ -0.51
PTPRK-208ENST00000392449 CCDC190Q86UF4 302 aa11.89□□□□□ -0.51
PTPRK-208ENST00000392449 OR8I2Q8N0Y5 310 aa11.89□□□□□ -0.51
PTPRK-208ENST00000392449 C17orf77Q96MU5 243 aa11.89□□□□□ -0.51
PTPRK-208ENST00000392449 SLC25A32Q9H2D1 315 aa11.89□□□□□ -0.51
PTPRK-208ENST00000392449 SLC25A22Q9H936 323 aa11.89□□□□□ -0.51
PTPRK-208ENST00000392449 ZNF705FA8MVS1 300 aaPredicted RBP11.88□□□□□ -0.51
PTPRK-208ENST00000392449 SYNGR2O43760 224 aa11.88□□□□□ -0.51
PTPRK-208ENST00000392449 ADAP1O75689 374 aa11.88□□□□□ -0.51
PTPRK-208ENST00000392449 ZNF705DP0CH99 300 aaPredicted RBP11.88□□□□□ -0.51
PTPRK-208ENST00000392449 ZNF705BP0CI00 300 aaPredicted RBP11.88□□□□□ -0.51
PTPRK-208ENST00000392449 SLC25A6P12236 298 aa11.88□□□□□ -0.51
PTPRK-208ENST00000392449 SPANXN5Q5MJ07 72 aa11.88□□□□□ -0.51
PTPRK-208ENST00000392449 C1orf194Q5T5A4 169 aa11.88□□□□□ -0.51
PTPRK-208ENST00000392449 FOXI2Q6ZQN5 318 aa11.88□□□□□ -0.51
PTPRK-208ENST00000392449 CENPSQ8N2Z9 138 aa11.88□□□□□ -0.51
PTPRK-208ENST00000392449 SLC25A21Q9BQT8 299 aaPredicted RBP11.88□□□□□ -0.51
PTPRK-208ENST00000392449 PFDN2Q9UHV9 154 aa11.88□□□□□ -0.51
PTPRK-208ENST00000392449 TMED3Q9Y3Q3 217 aa11.88□□□□□ -0.51
PTPRK-208ENST00000392449 FABP1P07148 127 aa11.87□□□□□ -0.51
PTPRK-208ENST00000392449 ID1P41134 155 aa11.87□□□□□ -0.51
PTPRK-208ENST00000392449 FAM78BQ5VT40 261 aa11.87□□□□□ -0.51
PTPRK-208ENST00000392449 RNF126Q9BV68 326 aa11.87□□□□□ -0.51
PTPRK-208ENST00000392449 MED6O75586 246 aa11.86□□□□□ -0.51
PTPRK-208ENST00000392449 AMBPP02760 352 aa11.86□□□□□ -0.51
PTPRK-208ENST00000392449 ORM2P19652 201 aa11.86□□□□□ -0.51
PTPRK-208ENST00000392449 S100A5P33763 92 aa11.86□□□□□ -0.51
PTPRK-208ENST00000392449 IGFL4Q6B9Z1 124 aa11.86□□□□□ -0.51
PTPRK-208ENST00000392449 ACOT7LQ6ZUV0 252 aa11.86□□□□□ -0.51
PTPRK-208ENST00000392449 RBM38Q9H0Z9 239 aaKnown RBP11.86□□□□□ -0.51
PTPRK-208ENST00000392449 FLVCR2Q9UPI3 526 aa11.86□□□□□ -0.51
PTPRK-208ENST00000392449 HERC2O95714 4834 aa11.86□□□□□ -0.51
PTPRK-208ENST00000392449 ISLRO14498 428 aa11.85□□□□□ -0.51
PTPRK-208ENST00000392449 AKR1C1Q04828 323 aa11.85□□□□□ -0.51
PTPRK-208ENST00000392449 C16orf92Q96LL3 132 aa11.85□□□□□ -0.51
PTPRK-208ENST00000392449 CIB3Q96Q77 187 aaPredicted RBP11.85□□□□□ -0.51
PTPRK-208ENST00000392449 NEU1Q99519 415 aa11.85□□□□□ -0.51
PTPRK-208ENST00000392449 RSG1Q9BU20 258 aa11.85□□□□□ -0.51
PTPRK-208ENST00000392449 SRRQ9GZT4 340 aa11.85□□□□□ -0.51
PTPRK-208ENST00000392449 DOK5Q9P104 306 aa11.85□□□□□ -0.51
PTPRK-208ENST00000392449 FAT2Q9NYQ8 4349 aa11.85□□□□□ -0.51
PTPRK-208ENST00000392449 DNAH2Q9P225 4427 aa11.84□□□□□ -0.51
PTPRK-208ENST00000392449 PIGBOS1A0A0B4J2F0 54 aa11.84□□□□□ -0.51
PTPRK-208ENST00000392449 A0A0J9YX75 114 aa11.84□□□□□ -0.51
PTPRK-208ENST00000392449 LINC00854A0A1B0GVQ3 168 aa11.84□□□□□ -0.51
PTPRK-208ENST00000392449 ZNF98A6NK75 572 aa11.84□□□□□ -0.51
PTPRK-208ENST00000392449 PRB4P10163 310 aaPredicted RBP11.84□□□□□ -0.51
PTPRK-208ENST00000392449 POLR2GP62487 172 aaKnown RBP eCLIP11.84□□□□□ -0.51
PTPRK-208ENST00000392449 BAK1Q16611 211 aa11.84□□□□□ -0.51
PTPRK-208ENST00000392449 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.84□□□□□ -0.51
PTPRK-208ENST00000392449 C1orf158Q8N1D5 194 aa11.84□□□□□ -0.51
PTPRK-208ENST00000392449 OR1B1Q8NGR6 318 aa11.84□□□□□ -0.51
PTPRK-208ENST00000392449 KRTAP17-1Q9BYP8 105 aa11.84□□□□□ -0.51
PTPRK-208ENST00000392449 C9orf170A2RU37 121 aa11.83□□□□□ -0.52
PTPRK-208ENST00000392449 CCNKO75909 580 aa11.83□□□□□ -0.52
PTPRK-208ENST00000392449 PAX9P55771 341 aa11.83□□□□□ -0.52
PTPRK-208ENST00000392449 RPP30P78346 268 aaKnown RBP11.83□□□□□ -0.52
PTPRK-208ENST00000392449 PSG9Q00887 426 aa11.83□□□□□ -0.52
PTPRK-208ENST00000392449 FAM222AQ5U5X8 452 aa11.83□□□□□ -0.52
PTPRK-208ENST00000392449 EBLN2Q6P2I7 272 aa11.83□□□□□ -0.52
PTPRK-208ENST00000392449 STRAPQ9Y3F4 350 aaKnown RBP11.83□□□□□ -0.52
PTPRK-208ENST00000392449 SMCO3A2RU48 225 aa11.83□□□□□ -0.52
PTPRK-208ENST00000392449 PRM2P04554 102 aa11.83□□□□□ -0.52
PTPRK-208ENST00000392449 SPART-AS1P0CW21 52 aa11.83□□□□□ -0.52
PTPRK-208ENST00000392449 GALR1P47211 349 aa11.83□□□□□ -0.52
PTPRK-208ENST00000392449 RNF182Q8N6D2 247 aa11.83□□□□□ -0.52
PTPRK-208ENST00000392449 BPIFCQ8NFQ6 507 aa11.83□□□□□ -0.52
PTPRK-208ENST00000392449 CLUHP3Q96NS8 147 aa11.83□□□□□ -0.52
PTPRK-208ENST00000392449 NDUFAF3Q9BU61 184 aa11.83□□□□□ -0.52
PTPRK-208ENST00000392449 RPRMQ9NS64 109 aa11.83□□□□□ -0.52
PTPRK-208ENST00000392449 DKK2Q9UBU2 259 aa11.83□□□□□ -0.52
PTPRK-208ENST00000392449 RFNGQ9Y644 331 aa11.83□□□□□ -0.52
PTPRK-208ENST00000392449 SSSCA1O60232 199 aa11.82□□□□□ -0.52
PTPRK-208ENST00000392449 ID3Q02535 119 aa11.82□□□□□ -0.52
PTPRK-208ENST00000392449 SPANXN2Q5MJ10 180 aa11.82□□□□□ -0.52
PTPRK-208ENST00000392449 AMTNQ6UX39 209 aa11.82□□□□□ -0.52
PTPRK-208ENST00000392449 DEDD2Q8WXF8 326 aa11.82□□□□□ -0.52
PTPRK-208ENST00000392449 C7orf50Q9BRJ6 194 aaKnown RBP11.82□□□□□ -0.52
PTPRK-208ENST00000392449 TMEM147Q9BVK8 224 aa11.82□□□□□ -0.52
PTPRK-208ENST00000392449 KIAA1109Q2LD37 5005 aa11.81□□□□□ -0.52
PTPRK-208ENST00000392449 TRAV8-2A0A0B4J237 113 aa11.81□□□□□ -0.52
PTPRK-208ENST00000392449 SMIM9A6NGZ8 99 aa11.81□□□□□ -0.52
PTPRK-208ENST00000392449 M0R2N4 97 aa11.81□□□□□ -0.52
PTPRK-208ENST00000392449 NDUFB6O95139 128 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms