RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 MEGF9Q9H1U4 602 aa9.74□□□□□ -0.85
CAPRIN1-202ENST00000389645 MRPL36Q9P0J6 103 aaKnown RBP9.74□□□□□ -0.85
CAPRIN1-202ENST00000389645 GNLYP22749 145 aa9.73□□□□□ -0.85
CAPRIN1-202ENST00000389645 APOBEC3AP31941 199 aaPredicted RBP9.73□□□□□ -0.85
CAPRIN1-202ENST00000389645 RPL15P61313 204 aaKnown RBP9.73□□□□□ -0.85
CAPRIN1-202ENST00000389645 OCIAD2Q56VL3 154 aa9.73□□□□□ -0.85
CAPRIN1-202ENST00000389645 CST9LQ9H4G1 147 aa9.73□□□□□ -0.85
CAPRIN1-202ENST00000389645 GNG7O60262 68 aa9.73□□□□□ -0.85
CAPRIN1-202ENST00000389645 FCN3O75636 299 aa9.73□□□□□ -0.85
CAPRIN1-202ENST00000389645 MEF2CQ06413 473 aaPredicted RBP9.73□□□□□ -0.85
CAPRIN1-202ENST00000389645 NDUFA4L2Q9NRX3 87 aa9.73□□□□□ -0.85
CAPRIN1-202ENST00000389645 LAMTOR2Q9Y2Q5 125 aa9.73□□□□□ -0.85
CAPRIN1-202ENST00000389645 DSCAML1Q8TD84 2053 aa9.73□□□□□ -0.85
CAPRIN1-202ENST00000389645 USP9XQ93008 2570 aaPredicted RBP9.73□□□□□ -0.85
CAPRIN1-202ENST00000389645 A0A1W2PPI3 338 aa9.73□□□□□ -0.85
CAPRIN1-202ENST00000389645 C22orf46C9J442 243 aa9.73□□□□□ -0.85
CAPRIN1-202ENST00000389645 TYMSP04818 313 aa9.73□□□□□ -0.85
CAPRIN1-202ENST00000389645 ARF6P62330 175 aa9.73□□□□□ -0.85
CAPRIN1-202ENST00000389645 OR1L4Q8NGR5 311 aa9.73□□□□□ -0.85
CAPRIN1-202ENST00000389645 ST6GALNAC6Q969X2 333 aa9.73□□□□□ -0.85
CAPRIN1-202ENST00000389645 RNF114Q9Y508 228 aa9.73□□□□□ -0.85
CAPRIN1-202ENST00000389645 CENPEQ02224 2701 aa9.72□□□□□ -0.85
CAPRIN1-202ENST00000389645 TMEM238LA0A1B0GVL6 79 aa9.72□□□□□ -0.85
CAPRIN1-202ENST00000389645 GPR6P46095 362 aaPredicted RBP9.72□□□□□ -0.85
CAPRIN1-202ENST00000389645 PPOXP50336 477 aa9.72□□□□□ -0.85
CAPRIN1-202ENST00000389645 SPATA45Q537H7 98 aa9.72□□□□□ -0.85
CAPRIN1-202ENST00000389645 TEX36Q5VZQ5 186 aa9.72□□□□□ -0.85
CAPRIN1-202ENST00000389645 ZNF833PQ6ZTB9 187 aa9.72□□□□□ -0.85
CAPRIN1-202ENST00000389645 MUC15Q8N387 334 aa9.72□□□□□ -0.85
CAPRIN1-202ENST00000389645 ZNF738Q8NE65 137 aa9.72□□□□□ -0.85
CAPRIN1-202ENST00000389645 OR2D3Q8NGH3 330 aa9.72□□□□□ -0.85
CAPRIN1-202ENST00000389645 ZNF503Q96F45 646 aa9.72□□□□□ -0.85
CAPRIN1-202ENST00000389645 ASCL2Q99929 193 aa9.72□□□□□ -0.85
CAPRIN1-202ENST00000389645 SSBP4Q9BWG4 385 aaPredicted RBP9.72□□□□□ -0.85
CAPRIN1-202ENST00000389645 LOXP28300 417 aaPredicted RBP9.72□□□□□ -0.85
CAPRIN1-202ENST00000389645 ISLRO14498 428 aa9.72□□□□□ -0.85
CAPRIN1-202ENST00000389645 IGHV1-8P0DP01 117 aa9.72□□□□□ -0.85
CAPRIN1-202ENST00000389645 ZNF137PP52743 207 aa9.72□□□□□ -0.85
CAPRIN1-202ENST00000389645 FBXL19-AS1Q494R0 122 aa9.72□□□□□ -0.85
CAPRIN1-202ENST00000389645 PNKDQ8N490 385 aa9.72□□□□□ -0.85
CAPRIN1-202ENST00000389645 OR5AN1Q8NGI8 311 aa9.72□□□□□ -0.85
CAPRIN1-202ENST00000389645 FAM168AQ92567 244 aa9.72□□□□□ -0.85
CAPRIN1-202ENST00000389645 DAZAP1Q96EP5 407 aaKnown RBP9.72□□□□□ -0.85
CAPRIN1-202ENST00000389645 CLEC5AQ9NY25 188 aa9.72□□□□□ -0.85
CAPRIN1-202ENST00000389645 ZNF586Q9NXT0 402 aa9.71□□□□□ -0.85
CAPRIN1-202ENST00000389645 PPIAL4CA0A0B4J2A2 164 aa9.71□□□□□ -0.86
CAPRIN1-202ENST00000389645 PPIAL4GP0DN37 164 aa9.71□□□□□ -0.86
CAPRIN1-202ENST00000389645 POU2AF1Q16633 256 aa9.71□□□□□ -0.86
CAPRIN1-202ENST00000389645 GNB4Q9HAV0 340 aa9.71□□□□□ -0.86
CAPRIN1-202ENST00000389645 V9GYV3 84 aa9.71□□□□□ -0.86
CAPRIN1-202ENST00000389645 CACNG8Q8WXS5 425 aa9.7□□□□□ -0.86
CAPRIN1-202ENST00000389645 TMEM133Q9H2Q1 129 aa9.7□□□□□ -0.86
CAPRIN1-202ENST00000389645 PRRX1P54821 245 aa9.7□□□□□ -0.86
CAPRIN1-202ENST00000389645 COX11Q9Y6N1 276 aa9.7□□□□□ -0.86
CAPRIN1-202ENST00000389645 VPS13CQ709C8 3753 aa9.7□□□□□ -0.86
CAPRIN1-202ENST00000389645 TCRBV4S1A1TA0A5B7 111 aa9.7□□□□□ -0.86
CAPRIN1-202ENST00000389645 C9JCJ5 164 aa9.7□□□□□ -0.86
CAPRIN1-202ENST00000389645 K7EP13 123 aa9.7□□□□□ -0.86
CAPRIN1-202ENST00000389645 PEX7O00628 323 aa9.7□□□□□ -0.86
CAPRIN1-202ENST00000389645 MC5RP33032 325 aa9.7□□□□□ -0.86
CAPRIN1-202ENST00000389645 TMEM177Q53S58 311 aa9.7□□□□□ -0.86
CAPRIN1-202ENST00000389645 RNASEKQ6P5S7 137 aaKnown RBP9.7□□□□□ -0.86
CAPRIN1-202ENST00000389645 TMEM167AQ8TBQ9 72 aa9.7□□□□□ -0.86
CAPRIN1-202ENST00000389645 SLC25A2Q9BXI2 301 aa9.7□□□□□ -0.86
CAPRIN1-202ENST00000389645 ZNF462Q96JM2 2506 aa9.7□□□□□ -0.86
CAPRIN1-202ENST00000389645 CSMD1Q96PZ7 3565 aa9.7□□□□□ -0.86
CAPRIN1-202ENST00000389645 A0A1W2PRE2 83 aa9.69□□□□□ -0.86
CAPRIN1-202ENST00000389645 NCBP2LA6PVI3 153 aaKnown RBP9.69□□□□□ -0.86
CAPRIN1-202ENST00000389645 B9A039 149 aa9.69□□□□□ -0.86
CAPRIN1-202ENST00000389645 HYPMO75409 117 aa9.69□□□□□ -0.86
CAPRIN1-202ENST00000389645 HSBP1O75506 76 aa9.69□□□□□ -0.86
CAPRIN1-202ENST00000389645 APCSP02743 223 aa9.69□□□□□ -0.86
CAPRIN1-202ENST00000389645 FOXA3P55318 350 aaPredicted RBP9.69□□□□□ -0.86
CAPRIN1-202ENST00000389645 TMEM249Q2WGJ8 235 aa9.69□□□□□ -0.86
CAPRIN1-202ENST00000389645 KLF17Q5JT82 389 aaPredicted RBP9.69□□□□□ -0.86
CAPRIN1-202ENST00000389645 SSX8Q7RTT4 187 aa9.69□□□□□ -0.86
CAPRIN1-202ENST00000389645 SETD2Q9BYW2 2564 aaPredicted RBP9.69□□□□□ -0.86
CAPRIN1-202ENST00000389645 TRAV8-1A0A0A6YYK1 113 aa9.69□□□□□ -0.86
CAPRIN1-202ENST00000389645 IGHV3-35A0A0C4DH35 117 aa9.69□□□□□ -0.86
CAPRIN1-202ENST00000389645 NBEAP1P0C6P0 100 aa9.69□□□□□ -0.86
CAPRIN1-202ENST00000389645 ZNF672Q499Z4 452 aaPredicted RBP9.69□□□□□ -0.86
CAPRIN1-202ENST00000389645 COA6Q5JTJ3 125 aaKnown RBP9.69□□□□□ -0.86
CAPRIN1-202ENST00000389645 TCF24Q7RTU0 167 aa9.69□□□□□ -0.86
CAPRIN1-202ENST00000389645 BORCS7Q96B45 105 aa9.69□□□□□ -0.86
CAPRIN1-202ENST00000389645 PERPQ96FX8 193 aa9.69□□□□□ -0.86
CAPRIN1-202ENST00000389645 TBL2Q9Y4P3 447 aaKnown RBP9.69□□□□□ -0.86
CAPRIN1-202ENST00000389645 IGHV3OR16-8A0A075B7F1 116 aa9.69□□□□□ -0.86
CAPRIN1-202ENST00000389645 CSPG4Q6UVK1 2322 aa9.68□□□□□ -0.86
CAPRIN1-202ENST00000389645 IGHV2-26A0A0B4J1V2 119 aa9.68□□□□□ -0.86
CAPRIN1-202ENST00000389645 CORTO00230 105 aa9.68□□□□□ -0.86
CAPRIN1-202ENST00000389645 RUSC1-AS1Q66K80 236 aa9.68□□□□□ -0.86
CAPRIN1-202ENST00000389645 WDR73Q6P4I2 378 aa9.68□□□□□ -0.86
CAPRIN1-202ENST00000389645 ORAOV1Q8WV07 137 aa9.68□□□□□ -0.86
CAPRIN1-202ENST00000389645 MRPL32Q9BYC8 188 aaKnown RBP9.68□□□□□ -0.86
CAPRIN1-202ENST00000389645 A0A1W2PPR1 153 aa9.68□□□□□ -0.86
CAPRIN1-202ENST00000389645 DIRC3C9JPN6 131 aa9.68□□□□□ -0.86
CAPRIN1-202ENST00000389645 PATE2Q6UY27 113 aa9.68□□□□□ -0.86
CAPRIN1-202ENST00000389645 C11orf52Q96A22 123 aa9.68□□□□□ -0.86
CAPRIN1-202ENST00000389645 MCRIP2Q9BUT9 160 aaKnown RBP9.68□□□□□ -0.86
CAPRIN1-202ENST00000389645 BMI1P35226 326 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms