RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 OR8I2Q8N0Y5 310 aa10.15□□□□□ -0.78
SHOX-202ENST00000381575 C20orf173Q96LM9 149 aa10.15□□□□□ -0.78
SHOX-202ENST00000381575 TRGV9Q99603 122 aa10.15□□□□□ -0.78
SHOX-202ENST00000381575 SAV1Q9H4B6 383 aaPredicted RBP10.15□□□□□ -0.78
SHOX-202ENST00000381575 SLC25A22Q9H936 323 aa10.15□□□□□ -0.78
SHOX-202ENST00000381575 SEPSECSQ9HD40 501 aaKnown RBP10.15□□□□□ -0.78
SHOX-202ENST00000381575 SNRPGP15A8MWD9 76 aa10.14□□□□□ -0.79
SHOX-202ENST00000381575 SFT2D2O95562 160 aa10.14□□□□□ -0.79
SHOX-202ENST00000381575 ID1P41134 155 aa10.14□□□□□ -0.79
SHOX-202ENST00000381575 PSMB3P49720 205 aa10.14□□□□□ -0.79
SHOX-202ENST00000381575 ZNF705AQ6ZN79 300 aaPredicted RBP10.14□□□□□ -0.79
SHOX-202ENST00000381575 TMEM182Q6ZP80 229 aaPredicted RBP10.14□□□□□ -0.79
SHOX-202ENST00000381575 FOXI2Q6ZQN5 318 aa10.14□□□□□ -0.79
SHOX-202ENST00000381575 ZNF709Q8N972 641 aa10.14□□□□□ -0.79
SHOX-202ENST00000381575 THAP8Q8NA92 274 aa10.14□□□□□ -0.79
SHOX-202ENST00000381575 RNF126Q9BV68 326 aa10.14□□□□□ -0.79
SHOX-202ENST00000381575 SLC25A32Q9H2D1 315 aa10.14□□□□□ -0.79
SHOX-202ENST00000381575 PLA2G2EQ9NZK7 142 aa10.14□□□□□ -0.79
SHOX-202ENST00000381575 PFDN2Q9UHV9 154 aa10.14□□□□□ -0.79
SHOX-202ENST00000381575 ZNF705FA8MVS1 300 aaPredicted RBP10.14□□□□□ -0.79
SHOX-202ENST00000381575 PRSS46E5RG02 174 aa10.14□□□□□ -0.79
SHOX-202ENST00000381575 SYNGR2O43760 224 aa10.14□□□□□ -0.79
SHOX-202ENST00000381575 FABP1P07148 127 aa10.14□□□□□ -0.79
SHOX-202ENST00000381575 ZNF705DP0CH99 300 aaPredicted RBP10.14□□□□□ -0.79
SHOX-202ENST00000381575 ZNF705BP0CI00 300 aaPredicted RBP10.14□□□□□ -0.79
SHOX-202ENST00000381575 ATP5IP56385 69 aaPredicted RBP10.14□□□□□ -0.79
SHOX-202ENST00000381575 SPANXN5Q5MJ07 72 aa10.14□□□□□ -0.79
SHOX-202ENST00000381575 FAM78BQ5VT40 261 aa10.14□□□□□ -0.79
SHOX-202ENST00000381575 GGNBP1Q5YKI7 109 aa10.14□□□□□ -0.79
SHOX-202ENST00000381575 IGFL4Q6B9Z1 124 aa10.14□□□□□ -0.79
SHOX-202ENST00000381575 LRTM2Q8N967 370 aa10.14□□□□□ -0.79
SHOX-202ENST00000381575 C17orf77Q96MU5 243 aa10.14□□□□□ -0.79
SHOX-202ENST00000381575 KIAA1109Q2LD37 5005 aa10.13□□□□□ -0.79
SHOX-202ENST00000381575 MED6O75586 246 aa10.13□□□□□ -0.79
SHOX-202ENST00000381575 ADAP1O75689 374 aa10.13□□□□□ -0.79
SHOX-202ENST00000381575 AMBPP02760 352 aa10.13□□□□□ -0.79
SHOX-202ENST00000381575 SLC25A6P12236 298 aa10.13□□□□□ -0.79
SHOX-202ENST00000381575 ORM2P19652 201 aa10.13□□□□□ -0.79
SHOX-202ENST00000381575 S100A5P33763 92 aa10.13□□□□□ -0.79
SHOX-202ENST00000381575 AKR1C1Q04828 323 aa10.13□□□□□ -0.79
SHOX-202ENST00000381575 C1orf194Q5T5A4 169 aa10.13□□□□□ -0.79
SHOX-202ENST00000381575 ACOT7LQ6ZUV0 252 aa10.13□□□□□ -0.79
SHOX-202ENST00000381575 DOK5Q9P104 306 aa10.13□□□□□ -0.79
SHOX-202ENST00000381575 TMED3Q9Y3Q3 217 aa10.13□□□□□ -0.79
SHOX-202ENST00000381575 NACAE9PAV3 2078 aa10.12□□□□□ -0.79
SHOX-202ENST00000381575 LINC00854A0A1B0GVQ3 168 aa10.12□□□□□ -0.79
SHOX-202ENST00000381575 SMCO3A2RU48 225 aa10.12□□□□□ -0.79
SHOX-202ENST00000381575 ISLRO14498 428 aa10.12□□□□□ -0.79
SHOX-202ENST00000381575 PRB4P10163 310 aaPredicted RBP10.12□□□□□ -0.79
SHOX-202ENST00000381575 CCDC190Q86UF4 302 aa10.12□□□□□ -0.79
SHOX-202ENST00000381575 C16orf92Q96LL3 132 aa10.12□□□□□ -0.79
SHOX-202ENST00000381575 SLC25A21Q9BQT8 299 aaPredicted RBP10.12□□□□□ -0.79
SHOX-202ENST00000381575 RSG1Q9BU20 258 aa10.12□□□□□ -0.79
SHOX-202ENST00000381575 KRTAP17-1Q9BYP8 105 aa10.12□□□□□ -0.79
SHOX-202ENST00000381575 FLVCR2Q9UPI3 526 aa10.12□□□□□ -0.79
SHOX-202ENST00000381575 A0A0J9YX75 114 aa10.11□□□□□ -0.79
SHOX-202ENST00000381575 ZNF98A6NK75 572 aa10.11□□□□□ -0.79
SHOX-202ENST00000381575 M0R2N4 97 aa10.11□□□□□ -0.79
SHOX-202ENST00000381575 CCNKO75909 580 aa10.11□□□□□ -0.79
SHOX-202ENST00000381575 HTN3P15516 51 aa10.11□□□□□ -0.79
SHOX-202ENST00000381575 POLR2GP62487 172 aaKnown RBP eCLIP10.11□□□□□ -0.79
SHOX-202ENST00000381575 PSG9Q00887 426 aa10.11□□□□□ -0.79
SHOX-202ENST00000381575 EBLN2Q6P2I7 272 aa10.11□□□□□ -0.79
SHOX-202ENST00000381575 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.11□□□□□ -0.79
SHOX-202ENST00000381575 C1orf158Q8N1D5 194 aa10.11□□□□□ -0.79
SHOX-202ENST00000381575 OR1B1Q8NGR6 318 aa10.11□□□□□ -0.79
SHOX-202ENST00000381575 CIB3Q96Q77 187 aaPredicted RBP10.11□□□□□ -0.79
SHOX-202ENST00000381575 NEU1Q99519 415 aa10.11□□□□□ -0.79
SHOX-202ENST00000381575 C7orf50Q9BRJ6 194 aaKnown RBP10.11□□□□□ -0.79
SHOX-202ENST00000381575 RFNGQ9Y644 331 aa10.11□□□□□ -0.79
SHOX-202ENST00000381575 PIGBOS1A0A0B4J2F0 54 aa10.1□□□□□ -0.79
SHOX-202ENST00000381575 PRM2P04554 102 aa10.1□□□□□ -0.79
SHOX-202ENST00000381575 SPART-AS1P0CW21 52 aa10.1□□□□□ -0.79
SHOX-202ENST00000381575 GALR1P47211 349 aa10.1□□□□□ -0.79
SHOX-202ENST00000381575 PAX9P55771 341 aa10.1□□□□□ -0.79
SHOX-202ENST00000381575 RPP30P78346 268 aaKnown RBP10.1□□□□□ -0.79
SHOX-202ENST00000381575 FAM222AQ5U5X8 452 aa10.1□□□□□ -0.79
SHOX-202ENST00000381575 RNF182Q8N6D2 247 aa10.1□□□□□ -0.79
SHOX-202ENST00000381575 BPIFCQ8NFQ6 507 aa10.1□□□□□ -0.79
SHOX-202ENST00000381575 NDUFAF3Q9BU61 184 aa10.1□□□□□ -0.79
SHOX-202ENST00000381575 SRRQ9GZT4 340 aa10.1□□□□□ -0.79
SHOX-202ENST00000381575 RBM38Q9H0Z9 239 aaKnown RBP10.1□□□□□ -0.79
SHOX-202ENST00000381575 RPRMQ9NS64 109 aa10.1□□□□□ -0.79
SHOX-202ENST00000381575 STRAPQ9Y3F4 350 aaKnown RBP10.1□□□□□ -0.79
SHOX-202ENST00000381575 PKD1P98161 4303 aa10.09□□□□□ -0.79
SHOX-202ENST00000381575 LOC102723971A0A1B0GUV8 181 aa10.09□□□□□ -0.79
SHOX-202ENST00000381575 C9orf170A2RU37 121 aa10.09□□□□□ -0.79
SHOX-202ENST00000381575 SSSCA1O60232 199 aa10.09□□□□□ -0.79
SHOX-202ENST00000381575 RRAS2P62070 204 aaPredicted RBP10.09□□□□□ -0.79
SHOX-202ENST00000381575 FGL1Q08830 312 aa10.09□□□□□ -0.79
SHOX-202ENST00000381575 BAK1Q16611 211 aa10.09□□□□□ -0.79
SHOX-202ENST00000381575 TMEM147Q9BVK8 224 aa10.09□□□□□ -0.79
SHOX-202ENST00000381575 DKK2Q9UBU2 259 aa10.09□□□□□ -0.79
SHOX-202ENST00000381575 GOLT1BQ9Y3E0 138 aa10.09□□□□□ -0.79
SHOX-202ENST00000381575 TMEM189A5PLL7 270 aa10.08□□□□□ -0.8
SHOX-202ENST00000381575 M0R2Z0 102 aa10.08□□□□□ -0.8
SHOX-202ENST00000381575 AMTNQ6UX39 209 aa10.08□□□□□ -0.8
SHOX-202ENST00000381575 POM121L12Q8N7R1 296 aa10.08□□□□□ -0.8
SHOX-202ENST00000381575 CLUHP3Q96NS8 147 aa10.08□□□□□ -0.8
SHOX-202ENST00000381575 NIPSNAP3BQ9BS92 247 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms