RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 SPCS3P61009 180 aa11.47□□□□□ -0.57
VCX3A-201ENST00000381089 YPEL3P61236 119 aaPredicted RBP11.47□□□□□ -0.57
VCX3A-201ENST00000381089 BSXQ3C1V8 233 aa11.47□□□□□ -0.57
VCX3A-201ENST00000381089 ETFRF1Q6IPR1 90 aa11.47□□□□□ -0.57
VCX3A-201ENST00000381089 SIGLEC15Q6ZMC9 328 aa11.47□□□□□ -0.57
VCX3A-201ENST00000381089 COQ8AQ8NI60 647 aa11.47□□□□□ -0.57
VCX3A-201ENST00000381089 HEYLQ9NQ87 328 aaPredicted RBP11.47□□□□□ -0.57
VCX3A-201ENST00000381089 IL4P05112 153 aa11.46□□□□□ -0.57
VCX3A-201ENST00000381089 HOXB5P09067 269 aa11.46□□□□□ -0.57
VCX3A-201ENST00000381089 IGLC1P0CG04 106 aa11.46□□□□□ -0.57
VCX3A-201ENST00000381089 NUP62P37198 522 aaPredicted RBP11.46□□□□□ -0.57
VCX3A-201ENST00000381089 RND2P52198 227 aa11.46□□□□□ -0.57
VCX3A-201ENST00000381089 EMP1P54849 157 aa11.46□□□□□ -0.57
VCX3A-201ENST00000381089 FAM219AQ8IW50 185 aa11.46□□□□□ -0.57
VCX3A-201ENST00000381089 OR52E5Q8NH55 327 aa11.46□□□□□ -0.57
VCX3A-201ENST00000381089 RNASEH2CQ8TDP1 164 aaKnown RBP11.46□□□□□ -0.57
VCX3A-201ENST00000381089 ZNF431Q8TF32 576 aaPredicted RBP11.46□□□□□ -0.57
VCX3A-201ENST00000381089 IL22RA2Q969J5 263 aa11.46□□□□□ -0.57
VCX3A-201ENST00000381089 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.46□□□□□ -0.57
VCX3A-201ENST00000381089 PFDN2Q9UHV9 154 aa11.46□□□□□ -0.57
VCX3A-201ENST00000381089 PKD1P98161 4303 aa11.45□□□□□ -0.58
VCX3A-201ENST00000381089 A0A0B4J2A0 478 aa11.45□□□□□ -0.58
VCX3A-201ENST00000381089 NXPH3O95157 252 aa11.45□□□□□ -0.58
VCX3A-201ENST00000381089 HLA-DRB4P13762 266 aa11.45□□□□□ -0.58
VCX3A-201ENST00000381089 NKX2-1P43699 371 aaPredicted RBP11.45□□□□□ -0.58
VCX3A-201ENST00000381089 PRSS54Q6PEW0 395 aa11.45□□□□□ -0.58
VCX3A-201ENST00000381089 ZNF705AQ6ZN79 300 aaPredicted RBP11.45□□□□□ -0.58
VCX3A-201ENST00000381089 NOXA1Q86UR1 476 aa11.45□□□□□ -0.58
VCX3A-201ENST00000381089 GPR146Q96CH1 333 aa11.45□□□□□ -0.58
VCX3A-201ENST00000381089 MARVELD1Q9BSK0 173 aa11.45□□□□□ -0.58
VCX3A-201ENST00000381089 CACNG5Q9UF02 275 aa11.45□□□□□ -0.58
VCX3A-201ENST00000381089 SHPKQ9UHJ6 478 aa11.45□□□□□ -0.58
VCX3A-201ENST00000381089 RFNGQ9Y644 331 aa11.45□□□□□ -0.58
VCX3A-201ENST00000381089 HLA-DRB4X5D2U9 266 aa11.45□□□□□ -0.58
VCX3A-201ENST00000381089 IGLV2-18A0A075B6J9 118 aa11.44□□□□□ -0.58
VCX3A-201ENST00000381089 ADAP1O75689 374 aa11.44□□□□□ -0.58
VCX3A-201ENST00000381089 IL5P05113 134 aa11.44□□□□□ -0.58
VCX3A-201ENST00000381089 C2orf83Q53S99 150 aa11.44□□□□□ -0.58
VCX3A-201ENST00000381089 Q6ZRM9 215 aa11.44□□□□□ -0.58
VCX3A-201ENST00000381089 LRTM2Q8N967 370 aa11.44□□□□□ -0.58
VCX3A-201ENST00000381089 SLC24A4Q8NFF2 622 aa11.44□□□□□ -0.58
VCX3A-201ENST00000381089 MITD1Q8WV92 249 aa11.44□□□□□ -0.58
VCX3A-201ENST00000381089 SCRT1Q9BWW7 348 aa11.44□□□□□ -0.58
VCX3A-201ENST00000381089 GPN1Q9HCN4 374 aaPredicted RBP11.44□□□□□ -0.58
VCX3A-201ENST00000381089 CACFD1Q9UGQ2 172 aa11.44□□□□□ -0.58
VCX3A-201ENST00000381089 IGHV3OR16-12A0A075B7B8 117 aa11.43□□□□□ -0.58
VCX3A-201ENST00000381089 CEBPZOSA8MTT3 80 aa11.43□□□□□ -0.58
VCX3A-201ENST00000381089 ZNF705FA8MVS1 300 aaPredicted RBP11.43□□□□□ -0.58
VCX3A-201ENST00000381089 BUB3O43684 328 aa11.43□□□□□ -0.58
VCX3A-201ENST00000381089 ZNF705DP0CH99 300 aaPredicted RBP11.43□□□□□ -0.58
VCX3A-201ENST00000381089 ZNF705BP0CI00 300 aaPredicted RBP11.43□□□□□ -0.58
VCX3A-201ENST00000381089 RD3LP0DJH9 198 aa11.43□□□□□ -0.58
VCX3A-201ENST00000381089 ID1P41134 155 aa11.43□□□□□ -0.58
VCX3A-201ENST00000381089 USF2Q15853 346 aaPredicted RBP11.43□□□□□ -0.58
VCX3A-201ENST00000381089 RNF212Q495C1 297 aa11.43□□□□□ -0.58
VCX3A-201ENST00000381089 NMSQ5H8A3 153 aa11.43□□□□□ -0.58
VCX3A-201ENST00000381089 GGNBP1Q5YKI7 109 aa11.43□□□□□ -0.58
VCX3A-201ENST00000381089 C12orf45Q8N5I9 185 aaPredicted RBP11.43□□□□□ -0.58
VCX3A-201ENST00000381089 NIPSNAP3BQ9BS92 247 aa11.43□□□□□ -0.58
VCX3A-201ENST00000381089 DUXBA0A1W2PPF3 345 aa11.42□□□□□ -0.58
VCX3A-201ENST00000381089 CCSO14618 274 aa11.42□□□□□ -0.58
VCX3A-201ENST00000381089 PRAF2O60831 178 aa11.42□□□□□ -0.58
VCX3A-201ENST00000381089 TOMM40O96008 361 aa11.42□□□□□ -0.58
VCX3A-201ENST00000381089 SULT1A3P0DMM9 295 aa11.42□□□□□ -0.58
VCX3A-201ENST00000381089 SULT1A4P0DMN0 295 aa11.42□□□□□ -0.58
VCX3A-201ENST00000381089 AARDQ4LEZ3 155 aa11.42□□□□□ -0.58
VCX3A-201ENST00000381089 C1orf134Q5TEV5 83 aa11.42□□□□□ -0.58
VCX3A-201ENST00000381089 Q6ZR54 194 aa11.42□□□□□ -0.58
VCX3A-201ENST00000381089 ACY3Q96HD9 319 aa11.42□□□□□ -0.58
VCX3A-201ENST00000381089 ABCA13Q86UQ4 5058 aa11.42□□□□□ -0.58
VCX3A-201ENST00000381089 PIGBOS1A0A0B4J2F0 54 aa11.41□□□□□ -0.58
VCX3A-201ENST00000381089 FAM25EA8MYX2 175 aa11.41□□□□□ -0.58
VCX3A-201ENST00000381089 IGKV3-20P01619 116 aa11.41□□□□□ -0.58
VCX3A-201ENST00000381089 HTN3P15516 51 aa11.41□□□□□ -0.58
VCX3A-201ENST00000381089 SMCO1Q147U7 214 aa11.41□□□□□ -0.58
VCX3A-201ENST00000381089 OXA1LQ15070 435 aa11.41□□□□□ -0.58
VCX3A-201ENST00000381089 FOXI2Q6ZQN5 318 aa11.41□□□□□ -0.58
VCX3A-201ENST00000381089 OR1S1Q8NH92 325 aa11.41□□□□□ -0.58
VCX3A-201ENST00000381089 NPIPB3Q92617 1050 aa11.41□□□□□ -0.58
VCX3A-201ENST00000381089 LINC00052Q96N35 136 aa11.41□□□□□ -0.58
VCX3A-201ENST00000381089 DKK2Q9UBU2 259 aa11.41□□□□□ -0.58
VCX3A-201ENST00000381089 GOLT1BQ9Y3E0 138 aa11.41□□□□□ -0.58
VCX3A-201ENST00000381089 TMED3Q9Y3Q3 217 aa11.41□□□□□ -0.58
VCX3A-201ENST00000381089 ALG5Q9Y673 324 aa11.41□□□□□ -0.58
VCX3A-201ENST00000381089 SSNA1O43805 119 aa11.4□□□□□ -0.58
VCX3A-201ENST00000381089 HBE1P02100 147 aa11.4□□□□□ -0.58
VCX3A-201ENST00000381089 FAM222AQ5U5X8 452 aa11.4□□□□□ -0.58
VCX3A-201ENST00000381089 SPATA31B1PQ5VZV4 182 aa11.4□□□□□ -0.58
VCX3A-201ENST00000381089 OR51G1Q8NGK1 321 aa11.4□□□□□ -0.58
VCX3A-201ENST00000381089 RNF125Q96EQ8 232 aa11.4□□□□□ -0.58
VCX3A-201ENST00000381089 SAV1Q9H4B6 383 aaPredicted RBP11.4□□□□□ -0.58
VCX3A-201ENST00000381089 SNRPGP15A8MWD9 76 aa11.39□□□□□ -0.59
VCX3A-201ENST00000381089 PSG1P11464 419 aa11.39□□□□□ -0.59
VCX3A-201ENST00000381089 PSMB3P49720 205 aa11.39□□□□□ -0.59
VCX3A-201ENST00000381089 FXYD7P58549 80 aa11.39□□□□□ -0.59
VCX3A-201ENST00000381089 OR8G2PQ6IF36 304 aa11.39□□□□□ -0.59
VCX3A-201ENST00000381089 ZNF575Q86XF7 245 aa11.39□□□□□ -0.59
VCX3A-201ENST00000381089 OR4B1Q8NGF8 309 aa11.39□□□□□ -0.59
VCX3A-201ENST00000381089 CLUHP3Q96NS8 147 aa11.39□□□□□ -0.59
VCX3A-201ENST00000381089 PBDC1Q9BVG4 233 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms