RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 LY6EQ16553 131 aa7.91□□□□□ -1.14
SNX1-202ENST00000380285 DNAJC30Q96LL9 226 aa7.91□□□□□ -1.14
SNX1-202ENST00000380285 MALP21145 153 aa7.9□□□□□ -1.14
SNX1-202ENST00000380285 PSG3Q16557 428 aa7.9□□□□□ -1.14
SNX1-202ENST00000380285 DPH3P1Q9H4G8 78 aa7.9□□□□□ -1.14
SNX1-202ENST00000380285 ZNF492Q9P255 531 aa7.9□□□□□ -1.14
SNX1-202ENST00000380285 MST1P26927 711 aa7.9□□□□□ -1.14
SNX1-202ENST00000380285 NEGR1Q7Z3B1 354 aa7.9□□□□□ -1.14
SNX1-202ENST00000380285 IGKV1-5P01602 117 aa7.9□□□□□ -1.14
SNX1-202ENST00000380285 ZNF562Q6V9R5 426 aa7.9□□□□□ -1.14
SNX1-202ENST00000380285 TMEM256Q8N2U0 113 aa7.9□□□□□ -1.14
SNX1-202ENST00000380285 ZNF48Q96MX3 618 aaPredicted RBP7.9□□□□□ -1.14
SNX1-202ENST00000380285 TRAV5A0A0B4J249 113 aa7.9□□□□□ -1.15
SNX1-202ENST00000380285 IGKV1-12A0A0C4DH73 117 aa7.9□□□□□ -1.15
SNX1-202ENST00000380285 SMAD7O15105 426 aaKnown RBP7.9□□□□□ -1.15
SNX1-202ENST00000380285 IGKV1D-12P01611 117 aa7.9□□□□□ -1.15
SNX1-202ENST00000380285 TPTE2P1Q5T6R2 138 aa7.9□□□□□ -1.15
SNX1-202ENST00000380285 MINOS1Q5TGZ0 78 aa7.9□□□□□ -1.15
SNX1-202ENST00000380285 MINOS1-NBL1R4GNA1 71 aa7.9□□□□□ -1.15
SNX1-202ENST00000380285 ADCYAP1P18509 176 aa7.9□□□□□ -1.15
SNX1-202ENST00000380285 C9orf139Q6ZV77 190 aa7.9□□□□□ -1.15
SNX1-202ENST00000380285 ABHD17AQ96GS6 310 aa7.9□□□□□ -1.15
SNX1-202ENST00000380285 ZNF138P52744 262 aa7.89□□□□□ -1.15
SNX1-202ENST00000380285 PLXNA4Q9HCM2 1894 aa7.89□□□□□ -1.15
SNX1-202ENST00000380285 TRBV7-1A0A0A6YYK4 115 aa7.89□□□□□ -1.15
SNX1-202ENST00000380285 MPV17L2Q567V2 206 aa7.89□□□□□ -1.15
SNX1-202ENST00000380285 JMJD8Q96S16 334 aa7.89□□□□□ -1.15
SNX1-202ENST00000380285 PNRC2Q9NPJ4 139 aaKnown RBP7.89□□□□□ -1.15
SNX1-202ENST00000380285 ZNF407Q9C0G0 2248 aa7.89□□□□□ -1.15
SNX1-202ENST00000380285 NPFFR1Q9GZQ6 430 aa7.89□□□□□ -1.15
SNX1-202ENST00000380285 TOMM7Q9P0U1 55 aa7.89□□□□□ -1.15
SNX1-202ENST00000380285 FNDC1Q4ZHG4 1894 aaPredicted RBP7.89□□□□□ -1.15
SNX1-202ENST00000380285 IGHV2-70P01814 119 aa7.89□□□□□ -1.15
SNX1-202ENST00000380285 PAX8Q06710 450 aa7.89□□□□□ -1.15
SNX1-202ENST00000380285 ANAPC10Q9UM13 185 aa7.89□□□□□ -1.15
SNX1-202ENST00000380285 GFRA3O60609 400 aa7.89□□□□□ -1.15
SNX1-202ENST00000380285 RNASE6Q93091 150 aaKnown RBP7.89□□□□□ -1.15
SNX1-202ENST00000380285 PRR19A6NJB7 356 aa7.89□□□□□ -1.15
SNX1-202ENST00000380285 IL18BPO95998 194 aa7.89□□□□□ -1.15
SNX1-202ENST00000380285 CELA3BP08861 270 aa7.89□□□□□ -1.15
SNX1-202ENST00000380285 CELA3AP09093 270 aa7.89□□□□□ -1.15
SNX1-202ENST00000380285 IGHV3-35A0A0C4DH35 117 aa7.89□□□□□ -1.15
SNX1-202ENST00000380285 ZNHIT1O43257 154 aa7.89□□□□□ -1.15
SNX1-202ENST00000380285 MUC21A0A0G2JKD1 596 aa7.88□□□□□ -1.15
SNX1-202ENST00000380285 MUC21A0A140T8X8 626 aa7.88□□□□□ -1.15
SNX1-202ENST00000380285 IGKV3-20P01619 116 aa7.88□□□□□ -1.15
SNX1-202ENST00000380285 MUC21Q5SSG8 566 aa7.88□□□□□ -1.15
SNX1-202ENST00000380285 LTBP1Q14766 1721 aa7.88□□□□□ -1.15
SNX1-202ENST00000380285 TCF20Q9UGU0 1960 aaKnown RBP7.88□□□□□ -1.15
SNX1-202ENST00000380285 IGHV3-23P01764 117 aa7.88□□□□□ -1.15
SNX1-202ENST00000380285 FOXF2Q12947 444 aa7.88□□□□□ -1.15
SNX1-202ENST00000380285 C2orf82Q6UX34 121 aa7.88□□□□□ -1.15
SNX1-202ENST00000380285 F8W1H4 67 aa7.88□□□□□ -1.15
SNX1-202ENST00000380285 ZNF688P0C7X2 276 aa7.88□□□□□ -1.15
SNX1-202ENST00000380285 SP9P0CG40 484 aa7.88□□□□□ -1.15
SNX1-202ENST00000380285 FOXL2NBQ6ZUU3 175 aa7.88□□□□□ -1.15
SNX1-202ENST00000380285 TMEM75Q8N9X5 138 aa7.88□□□□□ -1.15
SNX1-202ENST00000380285 RASL10AQ92737 203 aa7.88□□□□□ -1.15
SNX1-202ENST00000380285 TRGV2A0A075B6R0 118 aa7.88□□□□□ -1.15
SNX1-202ENST00000380285 EVI2AP22794 236 aa7.88□□□□□ -1.15
SNX1-202ENST00000380285 OCIAD2Q56VL3 154 aa7.88□□□□□ -1.15
SNX1-202ENST00000380285 HELZP42694 1942 aaKnown RBP7.88□□□□□ -1.15
SNX1-202ENST00000380285 IGHV3-66A0A0C4DH42 116 aa7.88□□□□□ -1.15
SNX1-202ENST00000380285 TGFAP01135 160 aa7.88□□□□□ -1.15
SNX1-202ENST00000380285 OR10W1Q8NGF6 305 aa7.88□□□□□ -1.15
SNX1-202ENST00000380285 FAM168AQ92567 244 aa7.88□□□□□ -1.15
SNX1-202ENST00000380285 IGKV1-27A0A075B6S5 117 aa7.87□□□□□ -1.15
SNX1-202ENST00000380285 PF4P02776 101 aa7.87□□□□□ -1.15
SNX1-202ENST00000380285 PSG1P11464 419 aa7.87□□□□□ -1.15
SNX1-202ENST00000380285 LYZL1Q6UWQ5 148 aa7.87□□□□□ -1.15
SNX1-202ENST00000380285 ITLN2Q8WWU7 325 aaPredicted RBP7.87□□□□□ -1.15
SNX1-202ENST00000380285 IGHV3OR16-13A0A075B7E8 117 aa7.87□□□□□ -1.15
SNX1-202ENST00000380285 A0A087X0K7 114 aa7.87□□□□□ -1.15
SNX1-202ENST00000380285 IGHV3-74A0A0B4J1X5 117 aa7.87□□□□□ -1.15
SNX1-202ENST00000380285 TEX43Q6ZNM6 134 aa7.87□□□□□ -1.15
SNX1-202ENST00000380285 GTSCR1Q86UQ5 136 aa7.87□□□□□ -1.15
SNX1-202ENST00000380285 CRIM1Q9NZV1 1036 aa7.87□□□□□ -1.15
SNX1-202ENST00000380285 INAFM2P0DMQ5 153 aa7.87□□□□□ -1.15
SNX1-202ENST00000380285 FAM27E3Q08E93 113 aa7.87□□□□□ -1.15
SNX1-202ENST00000380285 A0A087WV48 116 aa7.87□□□□□ -1.15
SNX1-202ENST00000380285 PMS2P5A8MQ11 134 aa7.87□□□□□ -1.15
SNX1-202ENST00000380285 NPIPB5A8MRT5 1133 aa7.87□□□□□ -1.15
SNX1-202ENST00000380285 MST1LQ2TV78 715 aa7.87□□□□□ -1.15
SNX1-202ENST00000380285 C9orf106Q8NAJ2 232 aa7.87□□□□□ -1.15
SNX1-202ENST00000380285 RFNGQ9Y644 331 aa7.87□□□□□ -1.15
SNX1-202ENST00000380285 ARFGEF3Q5TH69 2177 aa7.87□□□□□ -1.15
SNX1-202ENST00000380285 C15orf62A8K5M9 175 aa7.87□□□□□ -1.15
SNX1-202ENST00000380285 STHQ8IWL8 128 aa7.87□□□□□ -1.15
SNX1-202ENST00000380285 CHAC1Q9BUX1 264 aa7.87□□□□□ -1.15
SNX1-202ENST00000380285 IGHV3-49A0A0A0MS15 119 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 MYMXA0A1B0GTQ4 84 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 ADARB2-AS1A8MUL3 147 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 MLNRO43193 412 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 IGHV2-5P01817 119 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 SPINK8P0C7L1 97 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 CCL3L1P16619 93 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 CD300EQ496F6 205 aaPredicted RBP7.86□□□□□ -1.15
SNX1-202ENST00000380285 LHFPL4Q7Z7J7 247 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 GGNQ86UU5 652 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 POLR3KQ9Y2Y1 108 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms