RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 RPL35AP18077 110 aaKnown RBP13.9□□□□□ -0.18
TMEM88B-201ENST00000378821 RPL11P62913 178 aaKnown RBP13.9□□□□□ -0.18
TMEM88B-201ENST00000378821 PAFAH1B2P68402 229 aa13.9□□□□□ -0.18
TMEM88B-201ENST00000378821 C16orf54Q6UWD8 224 aa13.9□□□□□ -0.18
TMEM88B-201ENST00000378821 OR10P1Q8NGE3 313 aa13.9□□□□□ -0.18
TMEM88B-201ENST00000378821 GRAMD2BQ96HH9 432 aa13.9□□□□□ -0.18
TMEM88B-201ENST00000378821 CSTL1Q9H114 145 aa13.9□□□□□ -0.18
TMEM88B-201ENST00000378821 AGRNO00468 2067 aa13.9□□□□□ -0.18
TMEM88B-201ENST00000378821 FAM24AA6NFZ4 105 aa13.89□□□□□ -0.19
TMEM88B-201ENST00000378821 GATA2P23769 480 aaPredicted RBP13.89□□□□□ -0.19
TMEM88B-201ENST00000378821 EIF2B2P49770 351 aaKnown RBP13.89□□□□□ -0.19
TMEM88B-201ENST00000378821 BCAP31P51572 246 aa13.89□□□□□ -0.19
TMEM88B-201ENST00000378821 CAV2P51636 162 aa13.89□□□□□ -0.19
TMEM88B-201ENST00000378821 ZNF124Q15973 351 aa13.89□□□□□ -0.19
TMEM88B-201ENST00000378821 TMEM182Q6ZP80 229 aaPredicted RBP13.89□□□□□ -0.19
TMEM88B-201ENST00000378821 PLECQ15149 4684 aaKnown RBP13.88□□□□□ -0.19
TMEM88B-201ENST00000378821 FNDC10F2Z333 226 aa13.88□□□□□ -0.19
TMEM88B-201ENST00000378821 BUB3O43684 328 aa13.88□□□□□ -0.19
TMEM88B-201ENST00000378821 SSNA1O43805 119 aa13.88□□□□□ -0.19
TMEM88B-201ENST00000378821 PVALBP20472 110 aaPredicted RBP13.88□□□□□ -0.19
TMEM88B-201ENST00000378821 H2BFSP57053 126 aa13.88□□□□□ -0.19
TMEM88B-201ENST00000378821 FAM24BQ8N5W8 94 aa13.88□□□□□ -0.19
TMEM88B-201ENST00000378821 STXBP6Q8NFX7 210 aa13.88□□□□□ -0.19
TMEM88B-201ENST00000378821 GATAD1Q8WUU5 269 aa13.88□□□□□ -0.19
TMEM88B-201ENST00000378821 NMES1Q9C002 83 aa13.88□□□□□ -0.19
TMEM88B-201ENST00000378821 MGAT4CQ9UBM8 478 aa13.88□□□□□ -0.19
TMEM88B-201ENST00000378821 IGSF23A1L1A6 192 aa13.87□□□□□ -0.19
TMEM88B-201ENST00000378821 DNASE2O00115 360 aaPredicted RBP13.87□□□□□ -0.19
TMEM88B-201ENST00000378821 CST7O76096 145 aa13.87□□□□□ -0.19
TMEM88B-201ENST00000378821 CYP2G1PQ6ZSU1 146 aa13.87□□□□□ -0.19
TMEM88B-201ENST00000378821 LYRM2Q9NU23 88 aaPredicted RBP13.87□□□□□ -0.19
TMEM88B-201ENST00000378821 ALG5Q9Y673 324 aa13.87□□□□□ -0.19
TMEM88B-201ENST00000378821 NUPR2A6NF83 97 aa13.86□□□□□ -0.19
TMEM88B-201ENST00000378821 DEDDO75618 318 aa13.86□□□□□ -0.19
TMEM88B-201ENST00000378821 SLC38A11Q08AI6 406 aa13.86□□□□□ -0.19
TMEM88B-201ENST00000378821 LRRC37A5PQ49AS3 106 aa13.86□□□□□ -0.19
TMEM88B-201ENST00000378821 BPIFCQ8NFQ6 507 aa13.86□□□□□ -0.19
TMEM88B-201ENST00000378821 GGACTQ9BVM4 153 aa13.86□□□□□ -0.19
TMEM88B-201ENST00000378821 NPVFQ9HCQ7 196 aa13.86□□□□□ -0.19
TMEM88B-201ENST00000378821 EPPK1P58107 5090 aaKnown RBP13.85□□□□□ -0.19
TMEM88B-201ENST00000378821 HELTA6NFD8 242 aa13.85□□□□□ -0.19
TMEM88B-201ENST00000378821 K7EQG2 157 aa13.85□□□□□ -0.19
TMEM88B-201ENST00000378821 CFDP00746 253 aaPredicted RBP13.85□□□□□ -0.19
TMEM88B-201ENST00000378821 NUP62P37198 522 aaPredicted RBP13.85□□□□□ -0.19
TMEM88B-201ENST00000378821 CEMP1Q6PRD7 247 aaPredicted RBP13.85□□□□□ -0.19
TMEM88B-201ENST00000378821 SIGLEC15Q6ZMC9 328 aa13.85□□□□□ -0.19
TMEM88B-201ENST00000378821 TMEM252Q8N6L7 170 aa13.85□□□□□ -0.19
TMEM88B-201ENST00000378821 TMEM217Q8N7C4 229 aa13.85□□□□□ -0.19
TMEM88B-201ENST00000378821 DCANP1Q8TF63 244 aa13.85□□□□□ -0.19
TMEM88B-201ENST00000378821 LINC00476Q8WZB0 136 aa13.85□□□□□ -0.19
TMEM88B-201ENST00000378821 OR5AC2Q9NZP5 309 aa13.85□□□□□ -0.19
TMEM88B-201ENST00000378821 ALMS1Q8TCU4 4167 aa13.84□□□□□ -0.19
TMEM88B-201ENST00000378821 CXorf65A6NEN9 183 aa13.84□□□□□ -0.19
TMEM88B-201ENST00000378821 H0YIZ8 118 aa13.84□□□□□ -0.19
TMEM88B-201ENST00000378821 SULT1A1P50225 295 aa13.84□□□□□ -0.19
TMEM88B-201ENST00000378821 TEPPQ6URK8 271 aa13.84□□□□□ -0.19
TMEM88B-201ENST00000378821 PPP1R14BQ96C90 147 aa13.84□□□□□ -0.19
TMEM88B-201ENST00000378821 ORM2P19652 201 aa13.83□□□□□ -0.2
TMEM88B-201ENST00000378821 DEFB131AP59861 70 aa13.83□□□□□ -0.2
TMEM88B-201ENST00000378821 CYCSP99999 105 aaKnown RBP13.83□□□□□ -0.2
TMEM88B-201ENST00000378821 STX12Q86Y82 276 aa13.83□□□□□ -0.2
TMEM88B-201ENST00000378821 OR1B1Q8NGR6 318 aa13.83□□□□□ -0.2
TMEM88B-201ENST00000378821 PFDN2Q9UHV9 154 aa13.83□□□□□ -0.2
TMEM88B-201ENST00000378821 ZNF688P0C7X2 276 aa13.82□□□□□ -0.2
TMEM88B-201ENST00000378821 LINC00869P0C866 280 aa13.82□□□□□ -0.2
TMEM88B-201ENST00000378821 AP2S1P53680 142 aaPredicted RBP13.82□□□□□ -0.2
TMEM88B-201ENST00000378821 SELENOTP62341 195 aa13.82□□□□□ -0.2
TMEM88B-201ENST00000378821 PMS2P11Q13670 270 aa13.82□□□□□ -0.2
TMEM88B-201ENST00000378821 LEMD1Q68G75 181 aa13.82□□□□□ -0.2
TMEM88B-201ENST00000378821 PPP1R1CQ8WVI7 109 aa13.82□□□□□ -0.2
TMEM88B-201ENST00000378821 MGST2Q99735 147 aa13.82□□□□□ -0.2
TMEM88B-201ENST00000378821 RARRES2Q99969 163 aa13.82□□□□□ -0.2
TMEM88B-201ENST00000378821 C11orf68Q9H3H3 251 aaKnown RBP13.82□□□□□ -0.2
TMEM88B-201ENST00000378821 DOK5Q9P104 306 aa13.82□□□□□ -0.2
TMEM88B-201ENST00000378821 SLC45A2Q9UMX9 530 aa13.82□□□□□ -0.2
TMEM88B-201ENST00000378821 E5RGE8 158 aa13.81□□□□□ -0.2
TMEM88B-201ENST00000378821 AGPAT2O15120 278 aa13.81□□□□□ -0.2
TMEM88B-201ENST00000378821 RLN2P04090 185 aa13.81□□□□□ -0.2
TMEM88B-201ENST00000378821 VWC2Q2TAL6 325 aa13.81□□□□□ -0.2
TMEM88B-201ENST00000378821 C1orf194Q5T5A4 169 aa13.81□□□□□ -0.2
TMEM88B-201ENST00000378821 TMEM147Q9BVK8 224 aa13.81□□□□□ -0.2
TMEM88B-201ENST00000378821 NRN1Q9NPD7 142 aa13.81□□□□□ -0.2
TMEM88B-201ENST00000378821 UQCC1Q9NVA1 299 aa13.81□□□□□ -0.2
TMEM88B-201ENST00000378821 UBE2L5PA0A1B0GUS4 154 aa13.8□□□□□ -0.2
TMEM88B-201ENST00000378821 ZNF98A6NK75 572 aa13.8□□□□□ -0.2
TMEM88B-201ENST00000378821 GIG44P09565 113 aaPredicted RBP13.8□□□□□ -0.2
TMEM88B-201ENST00000378821 CXCL3P19876 107 aa13.8□□□□□ -0.2
TMEM88B-201ENST00000378821 PLP1P60201 277 aa13.8□□□□□ -0.2
TMEM88B-201ENST00000378821 ZNF546Q86UE3 836 aa13.8□□□□□ -0.2
TMEM88B-201ENST00000378821 OR11H2Q8NH07 326 aa13.8□□□□□ -0.2
TMEM88B-201ENST00000378821 SLC25A32Q9H2D1 315 aa13.8□□□□□ -0.2
TMEM88B-201ENST00000378821 FBXL17Q9UF56 701 aa13.8□□□□□ -0.2
TMEM88B-201ENST00000378821 WDR83OSQ9Y284 106 aa13.8□□□□□ -0.2
TMEM88B-201ENST00000378821 H3BRN7 92 aa13.79□□□□□ -0.2
TMEM88B-201ENST00000378821 MPC2O95563 127 aa13.79□□□□□ -0.2
TMEM88B-201ENST00000378821 S100A11P31949 105 aa13.79□□□□□ -0.2
TMEM88B-201ENST00000378821 HBG1P69891 147 aa13.79□□□□□ -0.2
TMEM88B-201ENST00000378821 HBG2P69892 147 aa13.79□□□□□ -0.2
TMEM88B-201ENST00000378821 NHLH2Q02577 135 aa13.79□□□□□ -0.2
TMEM88B-201ENST00000378821 RGS21Q2M5E4 152 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms