RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 SMCO3A2RU48 225 aa11.22□□□□□ -0.61
RAB4B-202ENST00000378307 FAM25EA8MYX2 175 aa11.22□□□□□ -0.61
RAB4B-202ENST00000378307 FABP1P07148 127 aa11.22□□□□□ -0.61
RAB4B-202ENST00000378307 C12orf45Q8N5I9 185 aaPredicted RBP11.22□□□□□ -0.61
RAB4B-202ENST00000378307 OR11H2Q8NH07 326 aa11.22□□□□□ -0.61
RAB4B-202ENST00000378307 RARRES2Q99969 163 aa11.22□□□□□ -0.61
RAB4B-202ENST00000378307 PTTG2Q9NZH5 202 aa11.22□□□□□ -0.61
RAB4B-202ENST00000378307 LCE6AA0A183 80 aa11.21□□□□□ -0.61
RAB4B-202ENST00000378307 SOCS3O14543 225 aa11.21□□□□□ -0.61
RAB4B-202ENST00000378307 ORM2P19652 201 aa11.21□□□□□ -0.61
RAB4B-202ENST00000378307 GDF5OSQ5U4N7 250 aa11.21□□□□□ -0.61
RAB4B-202ENST00000378307 GATAD1Q8WUU5 269 aa11.21□□□□□ -0.61
RAB4B-202ENST00000378307 SLC25A32Q9H2D1 315 aa11.21□□□□□ -0.61
RAB4B-202ENST00000378307 C11orf1Q9H5F2 150 aa11.21□□□□□ -0.61
RAB4B-202ENST00000378307 ZNF98A6NK75 572 aa11.2□□□□□ -0.62
RAB4B-202ENST00000378307 K7EPK0 472 aa11.2□□□□□ -0.62
RAB4B-202ENST00000378307 TSC22D2O75157 780 aa11.2□□□□□ -0.62
RAB4B-202ENST00000378307 UPK1BO75841 260 aa11.2□□□□□ -0.62
RAB4B-202ENST00000378307 TAS2R30P59541 319 aa11.2□□□□□ -0.62
RAB4B-202ENST00000378307 DLK1P80370 383 aa11.2□□□□□ -0.62
RAB4B-202ENST00000378307 IL15RAQ13261 267 aa11.2□□□□□ -0.62
RAB4B-202ENST00000378307 PMS2P11Q13670 270 aa11.2□□□□□ -0.62
RAB4B-202ENST00000378307 ZNF846Q147U1 533 aa11.2□□□□□ -0.62
RAB4B-202ENST00000378307 C1orf194Q5T5A4 169 aa11.2□□□□□ -0.62
RAB4B-202ENST00000378307 CYP2G1PQ6ZSU1 146 aa11.2□□□□□ -0.62
RAB4B-202ENST00000378307 BPIFCQ8NFQ6 507 aa11.2□□□□□ -0.62
RAB4B-202ENST00000378307 PPP1R14BQ96C90 147 aa11.2□□□□□ -0.62
RAB4B-202ENST00000378307 SEPSECSQ9HD40 501 aaKnown RBP11.2□□□□□ -0.62
RAB4B-202ENST00000378307 CLEC5AQ9NY25 188 aa11.2□□□□□ -0.62
RAB4B-202ENST00000378307 DOK5Q9P104 306 aa11.2□□□□□ -0.62
RAB4B-202ENST00000378307 C5orf51A6NDU8 294 aa11.19□□□□□ -0.62
RAB4B-202ENST00000378307 DEFB4AO15263 64 aa11.19□□□□□ -0.62
RAB4B-202ENST00000378307 CFDP00746 253 aaPredicted RBP11.19□□□□□ -0.62
RAB4B-202ENST00000378307 SNRPD3P62318 126 aaKnown RBP11.19□□□□□ -0.62
RAB4B-202ENST00000378307 MZT2BQ6NZ67 158 aa11.19□□□□□ -0.62
RAB4B-202ENST00000378307 OR8I2Q8N0Y5 310 aa11.19□□□□□ -0.62
RAB4B-202ENST00000378307 CSNK1G2-AS1Q8NCQ2 148 aa11.19□□□□□ -0.62
RAB4B-202ENST00000378307 OR10P1Q8NGE3 313 aa11.19□□□□□ -0.62
RAB4B-202ENST00000378307 OR1B1Q8NGR6 318 aa11.19□□□□□ -0.62
RAB4B-202ENST00000378307 SLC25A22Q9H936 323 aa11.19□□□□□ -0.62
RAB4B-202ENST00000378307 LSM5Q9Y4Y9 91 aaKnown RBP11.19□□□□□ -0.62
RAB4B-202ENST00000378307 H3BMM0 161 aa11.18□□□□□ -0.62
RAB4B-202ENST00000378307 IL5P05113 134 aa11.18□□□□□ -0.62
RAB4B-202ENST00000378307 NUP62P37198 522 aaPredicted RBP11.18□□□□□ -0.62
RAB4B-202ENST00000378307 SLC38A11Q08AI6 406 aa11.18□□□□□ -0.62
RAB4B-202ENST00000378307 PATE2Q6UY27 113 aa11.18□□□□□ -0.62
RAB4B-202ENST00000378307 NRARPQ7Z6K4 114 aa11.18□□□□□ -0.62
RAB4B-202ENST00000378307 C20orf173Q96LM9 149 aa11.18□□□□□ -0.62
RAB4B-202ENST00000378307 C2orf50Q96LR7 162 aa11.18□□□□□ -0.62
RAB4B-202ENST00000378307 LINC00052Q96N35 136 aa11.18□□□□□ -0.62
RAB4B-202ENST00000378307 SCRT1Q9BWW7 348 aa11.18□□□□□ -0.62
RAB4B-202ENST00000378307 NPVFQ9HCQ7 196 aa11.18□□□□□ -0.62
RAB4B-202ENST00000378307 FBXL17Q9UF56 701 aa11.18□□□□□ -0.62
RAB4B-202ENST00000378307 PFDN2Q9UHV9 154 aa11.18□□□□□ -0.62
RAB4B-202ENST00000378307 SLC45A2Q9UMX9 530 aa11.18□□□□□ -0.62
RAB4B-202ENST00000378307 FAM24AA6NFZ4 105 aa11.17□□□□□ -0.62
RAB4B-202ENST00000378307 SPP1P10451 314 aa11.17□□□□□ -0.62
RAB4B-202ENST00000378307 MORN3Q6PF18 240 aaPredicted RBP11.17□□□□□ -0.62
RAB4B-202ENST00000378307 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.17□□□□□ -0.62
RAB4B-202ENST00000378307 RSG1Q9BU20 258 aa11.17□□□□□ -0.62
RAB4B-202ENST00000378307 SLC25A39Q9BZJ4 359 aaPredicted RBP11.17□□□□□ -0.62
RAB4B-202ENST00000378307 X6R8D5 127 aa11.17□□□□□ -0.62
RAB4B-202ENST00000378307 CXorf65A6NEN9 183 aa11.16□□□□□ -0.62
RAB4B-202ENST00000378307 FNDC10F2Z333 226 aa11.16□□□□□ -0.62
RAB4B-202ENST00000378307 F6UB75 175 aa11.16□□□□□ -0.62
RAB4B-202ENST00000378307 H3BRN7 92 aa11.16□□□□□ -0.62
RAB4B-202ENST00000378307 LINC00869P0C866 280 aa11.16□□□□□ -0.62
RAB4B-202ENST00000378307 HLA-DRB4P13762 266 aa11.16□□□□□ -0.62
RAB4B-202ENST00000378307 ATF4P18848 351 aaPredicted RBP11.16□□□□□ -0.62
RAB4B-202ENST00000378307 PSMB3P49720 205 aa11.16□□□□□ -0.62
RAB4B-202ENST00000378307 PLP1P60201 277 aa11.16□□□□□ -0.62
RAB4B-202ENST00000378307 RAB32Q13637 225 aa11.16□□□□□ -0.62
RAB4B-202ENST00000378307 Q8NAQ8 132 aa11.16□□□□□ -0.62
RAB4B-202ENST00000378307 ENKURQ8TC29 256 aa11.16□□□□□ -0.62
RAB4B-202ENST00000378307 UHRF2Q96PU4 802 aa11.16□□□□□ -0.62
RAB4B-202ENST00000378307 TMEM147Q9BVK8 224 aa11.16□□□□□ -0.62
RAB4B-202ENST00000378307 HLA-DRB4X5D2U9 266 aa11.16□□□□□ -0.62
RAB4B-202ENST00000378307 VPS13DQ5THJ4 4388 aa11.16□□□□□ -0.62
RAB4B-202ENST00000378307 ZNF705EA8MWA4 302 aaPredicted RBP11.15□□□□□ -0.62
RAB4B-202ENST00000378307 L7N2F9 121 aa11.15□□□□□ -0.62
RAB4B-202ENST00000378307 DEDDO75618 318 aa11.15□□□□□ -0.62
RAB4B-202ENST00000378307 CST7O76096 145 aa11.15□□□□□ -0.62
RAB4B-202ENST00000378307 SIX6O95475 246 aa11.15□□□□□ -0.62
RAB4B-202ENST00000378307 IGKV3-20P01619 116 aa11.15□□□□□ -0.62
RAB4B-202ENST00000378307 RBMY1A1P0DJD3 496 aaKnown RBP11.15□□□□□ -0.62
RAB4B-202ENST00000378307 RBMY1CP0DJD4 496 aa11.15□□□□□ -0.62
RAB4B-202ENST00000378307 NANOS2P60321 138 aaKnown RBP11.15□□□□□ -0.62
RAB4B-202ENST00000378307 VAMP2P63027 116 aa11.15□□□□□ -0.62
RAB4B-202ENST00000378307 RBMY1FQ15415 496 aaKnown RBP11.15□□□□□ -0.62
RAB4B-202ENST00000378307 IGFL4Q6B9Z1 124 aa11.15□□□□□ -0.62
RAB4B-202ENST00000378307 TEPPQ6URK8 271 aa11.15□□□□□ -0.62
RAB4B-202ENST00000378307 MGST2Q99735 147 aa11.15□□□□□ -0.62
RAB4B-202ENST00000378307 SHANK2-AS3Q9BTD1 123 aa11.15□□□□□ -0.62
RAB4B-202ENST00000378307 C11orf68Q9H3H3 251 aaKnown RBP11.15□□□□□ -0.62
RAB4B-202ENST00000378307 SAV1Q9H4B6 383 aaPredicted RBP11.15□□□□□ -0.62
RAB4B-202ENST00000378307 MGAT4CQ9UBM8 478 aa11.15□□□□□ -0.62
RAB4B-202ENST00000378307 HIGD1AQ9Y241 93 aa11.15□□□□□ -0.62
RAB4B-202ENST00000378307 TRAV8-2A0A0B4J237 113 aa11.14□□□□□ -0.63
RAB4B-202ENST00000378307 IGSF23A1L1A6 192 aa11.14□□□□□ -0.63
RAB4B-202ENST00000378307 ISLRO14498 428 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms