RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 GRNP28799 593 aaKnown RBP10.72□□□□□ -0.69
NPHP4-203ENST00000378169 RPL15P61313 204 aaKnown RBP10.72□□□□□ -0.69
NPHP4-203ENST00000378169 DIAPH2-AS1Q14236 149 aa10.72□□□□□ -0.69
NPHP4-203ENST00000378169 PVRIGQ6DKI7 326 aa10.72□□□□□ -0.69
NPHP4-203ENST00000378169 TMEM170AQ8WVE7 144 aa10.72□□□□□ -0.69
NPHP4-203ENST00000378169 CDC42EP3Q9UKI2 254 aa10.72□□□□□ -0.69
NPHP4-203ENST00000378169 C5orf64Q2M2E5 130 aa10.72□□□□□ -0.69
NPHP4-203ENST00000378169 C8orf46Q8TAG6 207 aa10.72□□□□□ -0.69
NPHP4-203ENST00000378169 ZNF502Q8TBZ5 544 aa10.72□□□□□ -0.69
NPHP4-203ENST00000378169 FMC1Q96HJ9 113 aa10.72□□□□□ -0.69
NPHP4-203ENST00000378169 MAP1LC3AQ9H492 121 aa10.72□□□□□ -0.69
NPHP4-203ENST00000378169 C9JCJ5 164 aa10.72□□□□□ -0.69
NPHP4-203ENST00000378169 GZMBP10144 247 aa10.72□□□□□ -0.69
NPHP4-203ENST00000378169 NBL1P41271 181 aa10.72□□□□□ -0.69
NPHP4-203ENST00000378169 RPS20P60866 119 aaKnown RBP10.72□□□□□ -0.69
NPHP4-203ENST00000378169 OR10AG1Q8NH19 301 aa10.72□□□□□ -0.69
NPHP4-203ENST00000378169 COL25A1Q9BXS0 654 aaPredicted RBP10.72□□□□□ -0.69
NPHP4-203ENST00000378169 OTORQ9NRC9 128 aa10.72□□□□□ -0.69
NPHP4-203ENST00000378169 OSTCQ9NRP0 149 aa10.72□□□□□ -0.69
NPHP4-203ENST00000378169 A0A1B0GW64 132 aa10.71□□□□□ -0.69
NPHP4-203ENST00000378169 LOXP28300 417 aaPredicted RBP10.71□□□□□ -0.69
NPHP4-203ENST00000378169 TMEM155Q4W5P6 130 aa10.71□□□□□ -0.69
NPHP4-203ENST00000378169 HAPLN4Q86UW8 402 aa10.71□□□□□ -0.69
NPHP4-203ENST00000378169 PMCHL1Q16048 86 aa10.71□□□□□ -0.69
NPHP4-203ENST00000378169 PSG8Q9UQ74 426 aa10.71□□□□□ -0.69
NPHP4-203ENST00000378169 A0A0G2JLM5 398 aa10.71□□□□□ -0.7
NPHP4-203ENST00000378169 IZUMO1RA6ND01 250 aa10.71□□□□□ -0.7
NPHP4-203ENST00000378169 CFHR2P36980 270 aa10.71□□□□□ -0.7
NPHP4-203ENST00000378169 F11RQ9Y624 299 aaKnown RBP10.71□□□□□ -0.7
NPHP4-203ENST00000378169 A0A1B0GWJ7 208 aa10.7□□□□□ -0.7
NPHP4-203ENST00000378169 LINC00587B1AMM8 73 aa10.7□□□□□ -0.7
NPHP4-203ENST00000378169 SCGB1C2P0DMR2 95 aa10.7□□□□□ -0.7
NPHP4-203ENST00000378169 C14orf144Q96I85 54 aa10.7□□□□□ -0.7
NPHP4-203ENST00000378169 DUX5Q96PT3 197 aa10.7□□□□□ -0.7
NPHP4-203ENST00000378169 FOSL1P15407 271 aa10.7□□□□□ -0.7
NPHP4-203ENST00000378169 SRD5A1P18405 259 aa10.7□□□□□ -0.7
NPHP4-203ENST00000378169 FAM159AQ6UWV7 190 aa10.7□□□□□ -0.7
NPHP4-203ENST00000378169 CIARTQ8N365 385 aaPredicted RBP10.7□□□□□ -0.7
NPHP4-203ENST00000378169 SLC25A39Q9BZJ4 359 aaPredicted RBP10.7□□□□□ -0.7
NPHP4-203ENST00000378169 C5orf52A6NGY3 159 aa10.7□□□□□ -0.7
NPHP4-203ENST00000378169 NPIPB5A8MRT5 1133 aa10.7□□□□□ -0.7
NPHP4-203ENST00000378169 M0R3E3 92 aa10.7□□□□□ -0.7
NPHP4-203ENST00000378169 APOHP02749 345 aaPredicted RBP10.7□□□□□ -0.7
NPHP4-203ENST00000378169 SRSF9Q13242 221 aaKnown RBP eCLIP10.7□□□□□ -0.7
NPHP4-203ENST00000378169 ZNF726P1Q15940 193 aa10.7□□□□□ -0.7
NPHP4-203ENST00000378169 C11orf44Q8N8P7 122 aa10.7□□□□□ -0.7
NPHP4-203ENST00000378169 TMEM14BQ9NUH8 114 aa10.7□□□□□ -0.7
NPHP4-203ENST00000378169 ZFP30Q9Y2G7 519 aa10.7□□□□□ -0.7
NPHP4-203ENST00000378169 NUDT3O95989 172 aa10.69□□□□□ -0.7
NPHP4-203ENST00000378169 DDB2Q92466 427 aa10.69□□□□□ -0.7
NPHP4-203ENST00000378169 HIST1H2BLQ99880 126 aa10.69□□□□□ -0.7
NPHP4-203ENST00000378169 PMCHL2Q9BQD1 86 aa10.69□□□□□ -0.7
NPHP4-203ENST00000378169 TMEM242Q9NWH2 141 aa10.69□□□□□ -0.7
NPHP4-203ENST00000378169 IGFL4Q6B9Z1 124 aa10.69□□□□□ -0.7
NPHP4-203ENST00000378169 IGFL2Q6UWQ7 119 aa10.69□□□□□ -0.7
NPHP4-203ENST00000378169 PRELID3AQ96N28 172 aa10.69□□□□□ -0.7
NPHP4-203ENST00000378169 ASCL2Q99929 193 aa10.69□□□□□ -0.7
NPHP4-203ENST00000378169 TPSG1Q9NRR2 321 aa10.69□□□□□ -0.7
NPHP4-203ENST00000378169 SRRM4A7MD48 611 aaKnown RBP10.69□□□□□ -0.7
NPHP4-203ENST00000378169 UQCRFS1P47985 274 aa10.69□□□□□ -0.7
NPHP4-203ENST00000378169 NUDT10Q8NFP7 164 aa10.69□□□□□ -0.7
NPHP4-203ENST00000378169 NUDT11Q96G61 164 aa10.69□□□□□ -0.7
NPHP4-203ENST00000378169 UQCR10Q9UDW1 63 aa10.69□□□□□ -0.7
NPHP4-203ENST00000378169 RPLP1P05386 114 aaKnown RBP10.69□□□□□ -0.7
NPHP4-203ENST00000378169 CD33P20138 364 aa10.69□□□□□ -0.7
NPHP4-203ENST00000378169 SNRPD3P62318 126 aaKnown RBP10.69□□□□□ -0.7
NPHP4-203ENST00000378169 ST6GALNAC6Q969X2 333 aa10.69□□□□□ -0.7
NPHP4-203ENST00000378169 H3BUX3 64 aa10.68□□□□□ -0.7
NPHP4-203ENST00000378169 M0QZK8 103 aa10.68□□□□□ -0.7
NPHP4-203ENST00000378169 UBE2CO00762 179 aa10.68□□□□□ -0.7
NPHP4-203ENST00000378169 NDUFS7O75251 213 aa10.68□□□□□ -0.7
NPHP4-203ENST00000378169 VDAC2P45880 294 aaPredicted RBP10.68□□□□□ -0.7
NPHP4-203ENST00000378169 FER1L6-AS1Q8NA97 138 aa10.68□□□□□ -0.7
NPHP4-203ENST00000378169 ITGB1BP1O14713 200 aa10.68□□□□□ -0.7
NPHP4-203ENST00000378169 SNAI2O43623 268 aa10.68□□□□□ -0.7
NPHP4-203ENST00000378169 PRTN3P24158 256 aa10.68□□□□□ -0.7
NPHP4-203ENST00000378169 Q8TCH9 128 aa10.68□□□□□ -0.7
NPHP4-203ENST00000378169 TMEM70Q9BUB7 260 aa10.68□□□□□ -0.7
NPHP4-203ENST00000378169 NRN1Q9NPD7 142 aa10.68□□□□□ -0.7
NPHP4-203ENST00000378169 TMEM131Q92545 1883 aa10.68□□□□□ -0.7
NPHP4-203ENST00000378169 SAA4P35542 130 aa10.68□□□□□ -0.7
NPHP4-203ENST00000378169 WFDC12Q8WWY7 111 aa10.68□□□□□ -0.7
NPHP4-203ENST00000378169 IGKV2-40A0A087WW87 121 aaPredicted RBP10.67□□□□□ -0.7
NPHP4-203ENST00000378169 IGKV2D-40P01614 121 aaPredicted RBP10.67□□□□□ -0.7
NPHP4-203ENST00000378169 COL5A1-AS1Q5SY13 56 aa10.67□□□□□ -0.7
NPHP4-203ENST00000378169 ZFYVE26Q68DK2 2539 aa10.67□□□□□ -0.7
NPHP4-203ENST00000378169 FBLN7Q53RD9 439 aa10.67□□□□□ -0.7
NPHP4-203ENST00000378169 Q6ZSR3 168 aa10.67□□□□□ -0.7
NPHP4-203ENST00000378169 TMEM256Q8N2U0 113 aa10.67□□□□□ -0.7
NPHP4-203ENST00000378169 OR5AN1Q8NGI8 311 aa10.67□□□□□ -0.7
NPHP4-203ENST00000378169 CTAG1AP78358 180 aa10.67□□□□□ -0.7
NPHP4-203ENST00000378169 WT1-ASQ06250 92 aa10.67□□□□□ -0.7
NPHP4-203ENST00000378169 FAM71F2Q6NXP2 309 aa10.67□□□□□ -0.7
NPHP4-203ENST00000378169 SEM1Q6ZVN7 128 aa10.67□□□□□ -0.7
NPHP4-203ENST00000378169 ZNF329Q86UD4 541 aa10.67□□□□□ -0.7
NPHP4-203ENST00000378169 TRGV9Q99603 122 aa10.67□□□□□ -0.7
NPHP4-203ENST00000378169 A0A1W2PRX2 142 aa10.66□□□□□ -0.7
NPHP4-203ENST00000378169 C7orf71A4D174 169 aa10.66□□□□□ -0.7
NPHP4-203ENST00000378169 FABP5P3A8MUU1 101 aa10.66□□□□□ -0.7
NPHP4-203ENST00000378169 NDPQ00604 133 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms