RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 KIAA2026Q5HYC2 2103 aa9.67□□□□□ -0.86
NPHP4-202ENST00000378161 FNDC1Q4ZHG4 1894 aaPredicted RBP9.67□□□□□ -0.86
NPHP4-202ENST00000378161 RALGAPA1Q6GYQ0 2036 aa9.67□□□□□ -0.86
NPHP4-202ENST00000378161 FCGR3BO75015 233 aa9.67□□□□□ -0.86
NPHP4-202ENST00000378161 HERVK_113P63121 156 aa9.67□□□□□ -0.86
NPHP4-202ENST00000378161 PSG7Q13046 419 aa9.67□□□□□ -0.86
NPHP4-202ENST00000378161 FHL1Q13642 323 aa9.67□□□□□ -0.86
NPHP4-202ENST00000378161 RNF166Q96A37 237 aaPredicted RBP9.67□□□□□ -0.86
NPHP4-202ENST00000378161 DUX3Q96PT4 197 aa9.67□□□□□ -0.86
NPHP4-202ENST00000378161 PLXND1Q9Y4D7 1925 aa9.67□□□□□ -0.86
NPHP4-202ENST00000378161 TCF20Q9UGU0 1960 aaKnown RBP9.67□□□□□ -0.86
NPHP4-202ENST00000378161 CLDN14O95500 239 aa9.67□□□□□ -0.86
NPHP4-202ENST00000378161 RNF144BQ7Z419 303 aa9.67□□□□□ -0.86
NPHP4-202ENST00000378161 IDI2-AS1Q9NZ38 188 aa9.67□□□□□ -0.86
NPHP4-202ENST00000378161 TTC28Q96AY4 2481 aa9.67□□□□□ -0.86
NPHP4-202ENST00000378161 TRGV5A0A0B4J1U4 118 aa9.66□□□□□ -0.86
NPHP4-202ENST00000378161 A0A1W2PR77 199 aa9.66□□□□□ -0.86
NPHP4-202ENST00000378161 PEX7O00628 323 aa9.66□□□□□ -0.86
NPHP4-202ENST00000378161 ORM1P02763 201 aa9.66□□□□□ -0.86
NPHP4-202ENST00000378161 DLX1P56177 255 aa9.66□□□□□ -0.86
NPHP4-202ENST00000378161 MED12LQ86YW9 2145 aa9.66□□□□□ -0.86
NPHP4-202ENST00000378161 IGKV1-9A0A0C4DH69 117 aa9.66□□□□□ -0.86
NPHP4-202ENST00000378161 PRR19A6NJB7 356 aa9.66□□□□□ -0.86
NPHP4-202ENST00000378161 SLC25A20O43772 301 aa9.66□□□□□ -0.86
NPHP4-202ENST00000378161 ERHP84090 104 aaKnown RBP9.66□□□□□ -0.86
NPHP4-202ENST00000378161 MIR17HGQ75NE6 70 aa9.66□□□□□ -0.86
NPHP4-202ENST00000378161 C8orf46Q8TAG6 207 aa9.66□□□□□ -0.86
NPHP4-202ENST00000378161 SRSF12Q8WXF0 261 aaKnown RBP9.66□□□□□ -0.86
NPHP4-202ENST00000378161 COQ2Q96H96 371 aa9.66□□□□□ -0.86
NPHP4-202ENST00000378161 SHANK1Q9Y566 2161 aa9.66□□□□□ -0.86
NPHP4-202ENST00000378161 TRBV20OR9-2A0A075B6H5 130 aa9.66□□□□□ -0.86
NPHP4-202ENST00000378161 CCL4P13236 92 aa9.66□□□□□ -0.86
NPHP4-202ENST00000378161 AMN1Q8IY45 258 aa9.66□□□□□ -0.86
NPHP4-202ENST00000378161 ORMDL3Q8N138 153 aa9.66□□□□□ -0.86
NPHP4-202ENST00000378161 SLC25A45Q8N413 288 aa9.66□□□□□ -0.86
NPHP4-202ENST00000378161 HIGD1BQ9P298 99 aa9.66□□□□□ -0.86
NPHP4-202ENST00000378161 SLC25A10Q9UBX3 287 aaPredicted RBP9.66□□□□□ -0.86
NPHP4-202ENST00000378161 LINC00312Q9Y6C7 94 aa9.66□□□□□ -0.86
NPHP4-202ENST00000378161 A0A0G2JRQ6 117 aa9.65□□□□□ -0.86
NPHP4-202ENST00000378161 CXorf67Q86X51 503 aaPredicted RBP9.65□□□□□ -0.86
NPHP4-202ENST00000378161 RAXQ9Y2V3 346 aa9.65□□□□□ -0.86
NPHP4-202ENST00000378161 EFNB3Q15768 340 aa9.65□□□□□ -0.86
NPHP4-202ENST00000378161 TMEM219Q86XT9 240 aa9.65□□□□□ -0.86
NPHP4-202ENST00000378161 GATD1Q8NB37 220 aa9.65□□□□□ -0.86
NPHP4-202ENST00000378161 FAM236AA0A1B0GUQ0 79 aa9.65□□□□□ -0.87
NPHP4-202ENST00000378161 FAM236BA0A1B0GV22 79 aa9.65□□□□□ -0.87
NPHP4-202ENST00000378161 CRXO43186 299 aaPredicted RBP9.65□□□□□ -0.87
NPHP4-202ENST00000378161 IGHV4-39P01824 125 aa9.65□□□□□ -0.87
NPHP4-202ENST00000378161 C11orf52Q96A22 123 aa9.65□□□□□ -0.87
NPHP4-202ENST00000378161 PGPA6NDG6 321 aa9.64□□□□□ -0.87
NPHP4-202ENST00000378161 NDUFA7O95182 113 aa9.64□□□□□ -0.87
NPHP4-202ENST00000378161 CCL1P22362 96 aa9.64□□□□□ -0.87
NPHP4-202ENST00000378161 CCL11P51671 97 aa9.64□□□□□ -0.87
NPHP4-202ENST00000378161 OR11H6Q8NGC7 330 aa9.64□□□□□ -0.87
NPHP4-202ENST00000378161 NTN5Q8WTR8 489 aaPredicted RBP9.64□□□□□ -0.87
NPHP4-202ENST00000378161 H3BMM0 161 aa9.64□□□□□ -0.87
NPHP4-202ENST00000378161 BRI3O95415 125 aa9.64□□□□□ -0.87
NPHP4-202ENST00000378161 IGLV3-19P01714 112 aa9.64□□□□□ -0.87
NPHP4-202ENST00000378161 UBE2WQ96B02 151 aa9.64□□□□□ -0.87
NPHP4-202ENST00000378161 PLPPR2Q96GM1 343 aa9.64□□□□□ -0.87
NPHP4-202ENST00000378161 DYNLRB1Q9NP97 96 aa9.64□□□□□ -0.87
NPHP4-202ENST00000378161 ATRXP46100 2492 aa9.64□□□□□ -0.87
NPHP4-202ENST00000378161 CACNA1HO95180 2353 aa9.64□□□□□ -0.87
NPHP4-202ENST00000378161 ARHGAP21Q5T5U3 1957 aa9.64□□□□□ -0.87
NPHP4-202ENST00000378161 ANAPC1Q9H1A4 1944 aa9.64□□□□□ -0.87
NPHP4-202ENST00000378161 SLC25A53Q5H9E4 307 aa9.64□□□□□ -0.87
NPHP4-202ENST00000378161 SPINK14Q6IE38 97 aa9.64□□□□□ -0.87
NPHP4-202ENST00000378161 SHISA5Q8N114 240 aa9.64□□□□□ -0.87
NPHP4-202ENST00000378161 DEFB108BQ8NET1 73 aa9.64□□□□□ -0.87
NPHP4-202ENST00000378161 FAM57AQ8TBR7 257 aa9.64□□□□□ -0.87
NPHP4-202ENST00000378161 FSCN3Q9NQT6 498 aa9.64□□□□□ -0.87
NPHP4-202ENST00000378161 DEFB108AA8MXU0 73 aa9.63□□□□□ -0.87
NPHP4-202ENST00000378161 TNFRSF1AP19438 455 aa9.63□□□□□ -0.87
NPHP4-202ENST00000378161 C2orf82Q6UX34 121 aa9.63□□□□□ -0.87
NPHP4-202ENST00000378161 COPS9Q8WXC6 57 aa9.63□□□□□ -0.87
NPHP4-202ENST00000378161 CHCHD5Q9BSY4 110 aa9.63□□□□□ -0.87
NPHP4-202ENST00000378161 PROCRQ9UNN8 238 aa9.63□□□□□ -0.87
NPHP4-202ENST00000378161 TMEM213A2RRL7 107 aa9.63□□□□□ -0.87
NPHP4-202ENST00000378161 CELA2AP08217 269 aa9.63□□□□□ -0.87
NPHP4-202ENST00000378161 Q6ZRM9 215 aa9.63□□□□□ -0.87
NPHP4-202ENST00000378161 ANKRD29Q8N6D5 301 aa9.63□□□□□ -0.87
NPHP4-202ENST00000378161 PRDM14Q9GZV8 571 aa9.63□□□□□ -0.87
NPHP4-202ENST00000378161 ARRDC1-AS1Q9H2J1 176 aa9.63□□□□□ -0.87
NPHP4-202ENST00000378161 TRBV25-1A0A075B6N4 114 aa9.63□□□□□ -0.87
NPHP4-202ENST00000378161 MYMXA0A1B0GTQ4 84 aa9.63□□□□□ -0.87
NPHP4-202ENST00000378161 UQCRQO14949 82 aa9.63□□□□□ -0.87
NPHP4-202ENST00000378161 SPINK2P20155 84 aa9.63□□□□□ -0.87
NPHP4-202ENST00000378161 C10orf113Q5VZT2 155 aa9.63□□□□□ -0.87
NPHP4-202ENST00000378161 DDB2Q92466 427 aa9.63□□□□□ -0.87
NPHP4-202ENST00000378161 C1orf147Q96MC9 270 aaPredicted RBP9.63□□□□□ -0.87
NPHP4-202ENST00000378161 FRMPD3Q5JV73 1810 aa9.63□□□□□ -0.87
NPHP4-202ENST00000378161 MEOX1P50221 254 aa9.63□□□□□ -0.87
NPHP4-202ENST00000378161 DLX6P56179 175 aa9.63□□□□□ -0.87
NPHP4-202ENST00000378161 TMEM78Q5T7P6 136 aa9.63□□□□□ -0.87
NPHP4-202ENST00000378161 ZNF488Q96MN9 340 aa9.63□□□□□ -0.87
NPHP4-202ENST00000378161 IGHV1-45A0A0A0MS14 117 aa9.62□□□□□ -0.87
NPHP4-202ENST00000378161 IGHV3-43A0A0B4J1X8 118 aa9.62□□□□□ -0.87
NPHP4-202ENST00000378161 K7ESF4 209 aa9.62□□□□□ -0.87
NPHP4-202ENST00000378161 NDUFA3O95167 84 aa9.62□□□□□ -0.87
NPHP4-202ENST00000378161 NPYP01303 97 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms