RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 EXOC3-AS1Q8N2X6 119 aa14.39□□□□□ -0.11
GNE-201ENST00000377902 VAMP3Q15836 100 aa14.38□□□□□ -0.11
GNE-201ENST00000377902 VSTM2AQ8TAG5 236 aa14.38□□□□□ -0.11
GNE-201ENST00000377902 CRXO43186 299 aaPredicted RBP14.38□□□□□ -0.11
GNE-201ENST00000377902 DEFB123Q8N688 67 aa14.38□□□□□ -0.11
GNE-201ENST00000377902 DAZAP1Q96EP5 407 aaKnown RBP14.38□□□□□ -0.11
GNE-201ENST00000377902 OR4C5Q8NGB2 326 aa14.37□□□□□ -0.11
GNE-201ENST00000377902 IGHV2-70DA0A0C4DH43 119 aa14.37□□□□□ -0.11
GNE-201ENST00000377902 PRNTQ86SH4 94 aa14.37□□□□□ -0.11
GNE-201ENST00000377902 LOC102724200A0A096LPH7 203 aaPredicted RBP14.36□□□□□ -0.11
GNE-201ENST00000377902 MUC21A0A0G2JKD1 596 aa14.36□□□□□ -0.11
GNE-201ENST00000377902 MUC21A0A140T8X8 626 aa14.36□□□□□ -0.11
GNE-201ENST00000377902 CHEK1O14757 476 aa14.36□□□□□ -0.11
GNE-201ENST00000377902 MUC21Q5SSG8 566 aa14.36□□□□□ -0.11
GNE-201ENST00000377902 RBPMS2Q6ZRY4 209 aaKnown RBP14.36□□□□□ -0.11
GNE-201ENST00000377902 C5orf17Q8NAS9 161 aa14.36□□□□□ -0.11
GNE-201ENST00000377902 TMUB1Q9BVT8 246 aa14.36□□□□□ -0.11
GNE-201ENST00000377902 RNF24Q9Y225 148 aa14.36□□□□□ -0.11
GNE-201ENST00000377902 SNAI2O43623 268 aa14.36□□□□□ -0.11
GNE-201ENST00000377902 COL8A1P27658 744 aa14.36□□□□□ -0.11
GNE-201ENST00000377902 TMEM30BQ3MIR4 351 aa14.36□□□□□ -0.11
GNE-201ENST00000377902 OR4A5Q8NH83 315 aa14.36□□□□□ -0.11
GNE-201ENST00000377902 ZC2HC1AQ96GY0 325 aa14.36□□□□□ -0.11
GNE-201ENST00000377902 FMC1Q96HJ9 113 aa14.36□□□□□ -0.11
GNE-201ENST00000377902 CTSZQ9UBR2 303 aa14.36□□□□□ -0.11
GNE-201ENST00000377902 OR2T8A6NH00 312 aa14.35□□□□□ -0.11
GNE-201ENST00000377902 CBY3A6NI87 242 aa14.35□□□□□ -0.11
GNE-201ENST00000377902 MEF2CQ06413 473 aaPredicted RBP14.35□□□□□ -0.11
GNE-201ENST00000377902 RNF151Q2KHN1 245 aa14.35□□□□□ -0.11
GNE-201ENST00000377902 GOLT1AQ6ZVE7 132 aa14.35□□□□□ -0.11
GNE-201ENST00000377902 DEFB124Q8NES8 71 aa14.35□□□□□ -0.11
GNE-201ENST00000377902 STXBP6Q8NFX7 210 aa14.35□□□□□ -0.11
GNE-201ENST00000377902 ZNF785A8K8V0 405 aa14.35□□□□□ -0.11
GNE-201ENST00000377902 K7EM74 188 aa14.35□□□□□ -0.11
GNE-201ENST00000377902 M0R296 226 aa14.35□□□□□ -0.11
GNE-201ENST00000377902 TAX1BP3O14907 124 aa14.35□□□□□ -0.11
GNE-201ENST00000377902 CRYGCP07315 174 aa14.35□□□□□ -0.11
GNE-201ENST00000377902 LYZP61626 148 aa14.35□□□□□ -0.11
GNE-201ENST00000377902 ADIPOQQ15848 244 aa14.35□□□□□ -0.11
GNE-201ENST00000377902 VMA21Q3ZAQ7 101 aa14.35□□□□□ -0.11
GNE-201ENST00000377902 BVES-AS1Q5T3Y7 98 aa14.35□□□□□ -0.11
GNE-201ENST00000377902 WFDC8Q8IUA0 241 aa14.35□□□□□ -0.11
GNE-201ENST00000377902 C22orf15Q8WYQ4 148 aa14.35□□□□□ -0.11
GNE-201ENST00000377902 TMEM186Q96B77 213 aa14.35□□□□□ -0.11
GNE-201ENST00000377902 CHCHD1Q96BP2 118 aaKnown RBP14.35□□□□□ -0.11
GNE-201ENST00000377902 ST20Q9HBF5 79 aa14.35□□□□□ -0.11
GNE-201ENST00000377902 CACNA1HO95180 2353 aa14.35□□□□□ -0.11
GNE-201ENST00000377902 A0A087X0K7 114 aa14.34□□□□□ -0.11
GNE-201ENST00000377902 C17orf100A8MU93 164 aa14.34□□□□□ -0.11
GNE-201ENST00000377902 ZADH2Q8N4Q0 377 aa14.34□□□□□ -0.11
GNE-201ENST00000377902 C17orf77Q96MU5 243 aa14.34□□□□□ -0.11
GNE-201ENST00000377902 SVEP1Q4LDE5 3571 aa14.34□□□□□ -0.11
GNE-201ENST00000377902 TPRP12270 2363 aaKnown RBP14.34□□□□□ -0.11
GNE-201ENST00000377902 TRGV9Q99603 122 aa14.34□□□□□ -0.11
GNE-201ENST00000377902 POLEQ07864 2286 aa14.34□□□□□ -0.11
GNE-201ENST00000377902 PPIAL4EA0A075B759 164 aa14.33□□□□□ -0.11
GNE-201ENST00000377902 PPIAL4DF5H284 164 aa14.33□□□□□ -0.11
GNE-201ENST00000377902 OVOL3O00110 214 aa14.33□□□□□ -0.11
GNE-201ENST00000377902 IGLV2-11P01706 119 aa14.33□□□□□ -0.11
GNE-201ENST00000377902 APOHP02749 345 aaPredicted RBP14.33□□□□□ -0.11
GNE-201ENST00000377902 PPIAL4FP0DN26 164 aa14.33□□□□□ -0.11
GNE-201ENST00000377902 TNFRSF1AP19438 455 aa14.33□□□□□ -0.11
GNE-201ENST00000377902 C1orf185Q5T7R7 199 aa14.33□□□□□ -0.11
GNE-201ENST00000377902 SLC25A34Q6PIV7 304 aa14.33□□□□□ -0.11
GNE-201ENST00000377902 Q86TA4 180 aa14.33□□□□□ -0.11
GNE-201ENST00000377902 K7EP13 123 aa14.33□□□□□ -0.12
GNE-201ENST00000377902 KLK10O43240 276 aa14.33□□□□□ -0.12
GNE-201ENST00000377902 PSG1P11464 419 aa14.33□□□□□ -0.12
GNE-201ENST00000377902 LRRC10Q5BKY1 277 aa14.33□□□□□ -0.12
GNE-201ENST00000377902 C8orf46Q8TAG6 207 aa14.33□□□□□ -0.12
GNE-201ENST00000377902 MALRD1Q5VYJ5 2156 aa14.33□□□□□ -0.12
GNE-201ENST00000377902 TMEM178BH3BS89 294 aa14.32□□□□□ -0.12
GNE-201ENST00000377902 ARMS2P0C7Q2 107 aa14.32□□□□□ -0.12
GNE-201ENST00000377902 TMEM116Q8NCL8 245 aa14.32□□□□□ -0.12
GNE-201ENST00000377902 SCRT2Q9NQ03 307 aa14.32□□□□□ -0.12
GNE-201ENST00000377902 ZNF492Q9P255 531 aa14.32□□□□□ -0.12
GNE-201ENST00000377902 NDUFB3O43676 98 aa14.32□□□□□ -0.12
GNE-201ENST00000377902 CT83Q5H943 113 aa14.32□□□□□ -0.12
GNE-201ENST00000377902 TEX45Q8NA69 505 aa14.32□□□□□ -0.12
GNE-201ENST00000377902 PRSS33Q8NF86 280 aa14.32□□□□□ -0.12
GNE-201ENST00000377902 SMIM12Q96EX1 92 aa14.32□□□□□ -0.12
GNE-201ENST00000377902 NDFIP1Q9BT67 221 aa14.32□□□□□ -0.12
GNE-201ENST00000377902 TPPP3Q9BW30 176 aa14.32□□□□□ -0.12
GNE-201ENST00000377902 MAP1LC3CQ9BXW4 147 aa14.32□□□□□ -0.12
GNE-201ENST00000377902 AKAP13Q12802 2813 aa14.32□□□□□ -0.12
GNE-201ENST00000377902 NCR2O95944 276 aa14.31□□□□□ -0.12
GNE-201ENST00000377902 FAM106CPP0CH98 169 aa14.31□□□□□ -0.12
GNE-201ENST00000377902 HTR1DP28221 377 aa14.31□□□□□ -0.12
GNE-201ENST00000377902 LOXP28300 417 aaPredicted RBP14.31□□□□□ -0.12
GNE-201ENST00000377902 RPL27AP46776 148 aaKnown RBP14.31□□□□□ -0.12
GNE-201ENST00000377902 FAM106AQ4KMX7 169 aa14.31□□□□□ -0.12
GNE-201ENST00000377902 ETFRF1Q6IPR1 90 aa14.31□□□□□ -0.12
GNE-201ENST00000377902 SRSF12Q8WXF0 261 aaKnown RBP14.31□□□□□ -0.12
GNE-201ENST00000377902 TMEM191AQ9H0A3 160 aa14.31□□□□□ -0.12
GNE-201ENST00000377902 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.31□□□□□ -0.12
GNE-201ENST00000377902 FTH1P19P0C7X4 201 aa14.31□□□□□ -0.12
GNE-201ENST00000377902 TCTAP57738 103 aa14.31□□□□□ -0.12
GNE-201ENST00000377902 C3orf36Q3SXR2 165 aa14.31□□□□□ -0.12
GNE-201ENST00000377902 LRBAP50851 2863 aa14.31□□□□□ -0.12
GNE-201ENST00000377902 NPIPB6E9PJ23 425 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms