RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 CCSO14618 274 aa16.31■□□□□ 0.2
SRM-201ENST00000376957 BCAP31P51572 246 aa16.31■□□□□ 0.2
SRM-201ENST00000376957 ZNF124Q15973 351 aa16.31■□□□□ 0.2
SRM-201ENST00000376957 TMEM14EPQ6UXP3 125 aa16.31■□□□□ 0.2
SRM-201ENST00000376957 TMEM147Q9BVK8 224 aa16.31■□□□□ 0.2
SRM-201ENST00000376957 GGACTQ9BVM4 153 aa16.31■□□□□ 0.2
SRM-201ENST00000376957 RNF24Q9Y225 148 aa16.31■□□□□ 0.2
SRM-201ENST00000376957 LSM5Q9Y4Y9 91 aaKnown RBP16.31■□□□□ 0.2
SRM-201ENST00000376957 IGKV1OR2-108A0A075B7D4 117 aa16.3■□□□□ 0.2
SRM-201ENST00000376957 PRAF2O60831 178 aa16.3■□□□□ 0.2
SRM-201ENST00000376957 PAX9P55771 341 aa16.3■□□□□ 0.2
SRM-201ENST00000376957 PSMG4Q5JS54 123 aa16.3■□□□□ 0.2
SRM-201ENST00000376957 MORN3Q6PF18 240 aaPredicted RBP16.3■□□□□ 0.2
SRM-201ENST00000376957 FAM24BQ8N5W8 94 aa16.3■□□□□ 0.2
SRM-201ENST00000376957 GPR82Q96P67 336 aa16.3■□□□□ 0.2
SRM-201ENST00000376957 RCL1Q9Y2P8 373 aaKnown RBP16.3■□□□□ 0.2
SRM-201ENST00000376957 C7orf66A4D0T2 115 aa16.29■□□□□ 0.2
SRM-201ENST00000376957 CA1P00915 261 aaPredicted RBP16.29■□□□□ 0.2
SRM-201ENST00000376957 SPP1P10451 314 aa16.29■□□□□ 0.2
SRM-201ENST00000376957 ORM2P19652 201 aa16.29■□□□□ 0.2
SRM-201ENST00000376957 GALR1P47211 349 aa16.29■□□□□ 0.2
SRM-201ENST00000376957 CAV2P51636 162 aa16.29■□□□□ 0.2
SRM-201ENST00000376957 RAP2BP61225 183 aa16.29■□□□□ 0.2
SRM-201ENST00000376957 NUTF2P61970 127 aaKnown RBP16.29■□□□□ 0.2
SRM-201ENST00000376957 RRAS2P62070 204 aaPredicted RBP16.29■□□□□ 0.2
SRM-201ENST00000376957 TEPPQ6URK8 271 aa16.29■□□□□ 0.2
SRM-201ENST00000376957 CYP2G1PQ6ZSU1 146 aa16.29■□□□□ 0.2
SRM-201ENST00000376957 OR1B1Q8NGR6 318 aa16.29■□□□□ 0.2
SRM-201ENST00000376957 NBEAL2Q6ZNJ1 2754 aa16.29■□□□□ 0.2
SRM-201ENST00000376957 MEOX2P50222 304 aa16.28■□□□□ 0.2
SRM-201ENST00000376957 RAB31Q13636 194 aa16.28■□□□□ 0.2
SRM-201ENST00000376957 ZFAND6Q6FIF0 208 aa16.28■□□□□ 0.2
SRM-201ENST00000376957 PMS2P5A8MQ11 134 aa16.27■□□□□ 0.2
SRM-201ENST00000376957 S100A10P60903 97 aa16.27■□□□□ 0.2
SRM-201ENST00000376957 ACTL10Q5JWF8 245 aa16.27■□□□□ 0.2
SRM-201ENST00000376957 SLC25A22Q9H936 323 aa16.27■□□□□ 0.2
SRM-201ENST00000376957 K7EPK0 472 aa16.26■□□□□ 0.19
SRM-201ENST00000376957 GOSR2O14653 212 aa16.26■□□□□ 0.19
SRM-201ENST00000376957 RLN2P04090 185 aa16.26■□□□□ 0.19
SRM-201ENST00000376957 RARRES2Q99969 163 aa16.26■□□□□ 0.19
SRM-201ENST00000376957 INMT-MINDY4F8WBC2 141 aa16.25■□□□□ 0.19
SRM-201ENST00000376957 HYPMO75409 117 aa16.25■□□□□ 0.19
SRM-201ENST00000376957 DEDDO75618 318 aa16.25■□□□□ 0.19
SRM-201ENST00000376957 PSMB3P49720 205 aa16.25■□□□□ 0.19
SRM-201ENST00000376957 HBG1P69891 147 aa16.25■□□□□ 0.19
SRM-201ENST00000376957 HBG2P69892 147 aa16.25■□□□□ 0.19
SRM-201ENST00000376957 CYCSP99999 105 aaKnown RBP16.25■□□□□ 0.19
SRM-201ENST00000376957 PXDC1Q5TGL8 231 aa16.25■□□□□ 0.19
SRM-201ENST00000376957 TRPT1Q86TN4 253 aaKnown RBP16.25■□□□□ 0.19
SRM-201ENST00000376957 ZNF546Q86UE3 836 aa16.25■□□□□ 0.19
SRM-201ENST00000376957 STX12Q86Y82 276 aa16.25■□□□□ 0.19
SRM-201ENST00000376957 HIGD1AQ9Y241 93 aa16.25■□□□□ 0.19
SRM-201ENST00000376957 ZNF98A6NK75 572 aa16.24■□□□□ 0.19
SRM-201ENST00000376957 OR5G3P0C626 314 aa16.24■□□□□ 0.19
SRM-201ENST00000376957 LINC00869P0C866 280 aa16.24■□□□□ 0.19
SRM-201ENST00000376957 GATA2P23769 480 aaPredicted RBP16.24■□□□□ 0.19
SRM-201ENST00000376957 NRARPQ7Z6K4 114 aa16.24■□□□□ 0.19
SRM-201ENST00000376957 C1QTNF4Q9BXJ3 329 aa16.24■□□□□ 0.19
SRM-201ENST00000376957 A0A0J9YWU9 116 aa16.23■□□□□ 0.19
SRM-201ENST00000376957 KNCNA6PVL3 124 aa16.23■□□□□ 0.19
SRM-201ENST00000376957 ISLRO14498 428 aa16.23■□□□□ 0.19
SRM-201ENST00000376957 ATF4P18848 351 aaPredicted RBP16.23■□□□□ 0.19
SRM-201ENST00000376957 OR11H2Q8NH07 326 aa16.23■□□□□ 0.19
SRM-201ENST00000376957 LINC00052Q96N35 136 aa16.23■□□□□ 0.19
SRM-201ENST00000376957 CCNKO75909 580 aa16.22■□□□□ 0.19
SRM-201ENST00000376957 S100A11P31949 105 aa16.22■□□□□ 0.19
SRM-201ENST00000376957 PLP1P60201 277 aa16.22■□□□□ 0.19
SRM-201ENST00000376957 IFITM3Q01628 133 aa16.22■□□□□ 0.19
SRM-201ENST00000376957 SLC38A11Q08AI6 406 aa16.22■□□□□ 0.19
SRM-201ENST00000376957 SPATA31B1PQ5VZV4 182 aa16.22■□□□□ 0.19
SRM-201ENST00000376957 C16orf92Q96LL3 132 aa16.22■□□□□ 0.19
SRM-201ENST00000376957 LYRM2Q9NU23 88 aaPredicted RBP16.22■□□□□ 0.19
SRM-201ENST00000376957 HUWE1Q7Z6Z7 4374 aaKnown RBP16.22■□□□□ 0.19
SRM-201ENST00000376957 RPL7P18124 248 aaKnown RBP16.21■□□□□ 0.19
SRM-201ENST00000376957 SULT1A1P50225 295 aa16.21■□□□□ 0.19
SRM-201ENST00000376957 RAB32Q13637 225 aa16.21■□□□□ 0.19
SRM-201ENST00000376957 EBLN2Q6P2I7 272 aa16.21■□□□□ 0.19
SRM-201ENST00000376957 MARVELD1Q9BSK0 173 aa16.21■□□□□ 0.19
SRM-201ENST00000376957 SLC25A39Q9BZJ4 359 aaPredicted RBP16.21■□□□□ 0.19
SRM-201ENST00000376957 DOK5Q9P104 306 aa16.21■□□□□ 0.19
SRM-201ENST00000376957 TMEM182Q6ZP80 229 aaPredicted RBP16.2■□□□□ 0.18
SRM-201ENST00000376957 Q6ZRG5 221 aa16.2■□□□□ 0.18
SRM-201ENST00000376957 RSG1Q9BU20 258 aa16.2■□□□□ 0.18
SRM-201ENST00000376957 NMES1Q9C002 83 aa16.2■□□□□ 0.18
SRM-201ENST00000376957 ARL6Q9H0F7 186 aa16.2■□□□□ 0.18
SRM-201ENST00000376957 SLC25A32Q9H2D1 315 aa16.2■□□□□ 0.18
SRM-201ENST00000376957 RPRMQ9NS64 109 aa16.2■□□□□ 0.18
SRM-201ENST00000376957 UQCC1Q9NVA1 299 aa16.2■□□□□ 0.18
SRM-201ENST00000376957 FAM24AA6NFZ4 105 aa16.19■□□□□ 0.18
SRM-201ENST00000376957 AGPAT2O15120 278 aa16.19■□□□□ 0.18
SRM-201ENST00000376957 SSNA1O43805 119 aa16.19■□□□□ 0.18
SRM-201ENST00000376957 CST7O76096 145 aa16.19■□□□□ 0.18
SRM-201ENST00000376957 ATP6V1FQ16864 119 aa16.19■□□□□ 0.18
SRM-201ENST00000376957 FOXI2Q6ZQN5 318 aa16.19■□□□□ 0.18
SRM-201ENST00000376957 SHANK2-AS3Q9BTD1 123 aa16.19■□□□□ 0.18
SRM-201ENST00000376957 ELOA3CA0A087WX78 387 aaPredicted RBP16.18■□□□□ 0.18
SRM-201ENST00000376957 CXorf65A6NEN9 183 aa16.18■□□□□ 0.18
SRM-201ENST00000376957 H3BRN7 92 aa16.18■□□□□ 0.18
SRM-201ENST00000376957 HLA-DRB4P13762 266 aa16.18■□□□□ 0.18
SRM-201ENST00000376957 IL15RAQ13261 267 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms