RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 TRAV9-2A0A087WT02 112 aa10.56□□□□□ -0.72
ACTN1-202ENST00000376839 TRAV8-1A0A0A6YYK1 113 aa10.56□□□□□ -0.72
ACTN1-202ENST00000376839 C19orf71A6NCJ1 209 aa10.56□□□□□ -0.72
ACTN1-202ENST00000376839 TOMM40O96008 361 aa10.56□□□□□ -0.72
ACTN1-202ENST00000376839 LTAP01374 205 aa10.56□□□□□ -0.72
ACTN1-202ENST00000376839 TCRAP04437 139 aa10.56□□□□□ -0.72
ACTN1-202ENST00000376839 IGLL1P15814 213 aa10.56□□□□□ -0.72
ACTN1-202ENST00000376839 MC5RP33032 325 aa10.56□□□□□ -0.72
ACTN1-202ENST00000376839 HINT1P49773 126 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-202ENST00000376839 ETFRF1Q6IPR1 90 aa10.56□□□□□ -0.72
ACTN1-202ENST00000376839 Q6ZVH6 145 aa10.56□□□□□ -0.72
ACTN1-202ENST00000376839 C5orf17Q8NAS9 161 aa10.56□□□□□ -0.72
ACTN1-202ENST00000376839 PRSS33Q8NF86 280 aa10.56□□□□□ -0.72
ACTN1-202ENST00000376839 TP73-AS1Q9UF72 201 aa10.56□□□□□ -0.72
ACTN1-202ENST00000376839 MALRD1Q5VYJ5 2156 aa10.56□□□□□ -0.72
ACTN1-202ENST00000376839 SIAH2O43255 324 aa10.55□□□□□ -0.72
ACTN1-202ENST00000376839 TOX4O94842 621 aa10.55□□□□□ -0.72
ACTN1-202ENST00000376839 P01737 135 aa10.55□□□□□ -0.72
ACTN1-202ENST00000376839 LINC00173Q6ZV60 143 aa10.55□□□□□ -0.72
ACTN1-202ENST00000376839 TMEM116Q8NCL8 245 aa10.55□□□□□ -0.72
ACTN1-202ENST00000376839 LGALS7P47929 136 aa10.55□□□□□ -0.72
ACTN1-202ENST00000376839 SMIM12Q96EX1 92 aa10.55□□□□□ -0.72
ACTN1-202ENST00000376839 ZNF835Q9Y2P0 537 aa10.55□□□□□ -0.72
ACTN1-202ENST00000376839 A8MWL6 223 aa10.54□□□□□ -0.72
ACTN1-202ENST00000376839 PRB4P10163 310 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-202ENST00000376839 C22orf15Q8WYQ4 148 aa10.54□□□□□ -0.72
ACTN1-202ENST00000376839 RNASE6Q93091 150 aaKnown RBP10.54□□□□□ -0.72
ACTN1-202ENST00000376839 FMC1Q96HJ9 113 aa10.54□□□□□ -0.72
ACTN1-202ENST00000376839 TMEM133Q9H2Q1 129 aa10.54□□□□□ -0.72
ACTN1-202ENST00000376839 ACACAQ13085 2346 aa10.54□□□□□ -0.72
ACTN1-202ENST00000376839 CRYGBP07316 175 aa10.54□□□□□ -0.72
ACTN1-202ENST00000376839 CIARTQ8N365 385 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-202ENST00000376839 TEX45Q8NA69 505 aa10.54□□□□□ -0.72
ACTN1-202ENST00000376839 SIGLEC9Q9Y336 463 aa10.54□□□□□ -0.72
ACTN1-202ENST00000376839 ZNF292O60281 2723 aa10.54□□□□□ -0.72
ACTN1-202ENST00000376839 IGHV2-26A0A0B4J1V2 119 aa10.53□□□□□ -0.72
ACTN1-202ENST00000376839 TCF21O43680 179 aa10.53□□□□□ -0.72
ACTN1-202ENST00000376839 LYZP61626 148 aa10.53□□□□□ -0.72
ACTN1-202ENST00000376839 C8orf46Q8TAG6 207 aa10.53□□□□□ -0.72
ACTN1-202ENST00000376839 ZNF492Q9P255 531 aa10.53□□□□□ -0.72
ACTN1-202ENST00000376839 TPRP12270 2363 aaKnown RBP10.53□□□□□ -0.72
ACTN1-202ENST00000376839 APC2O95996 2303 aa10.53□□□□□ -0.72
ACTN1-202ENST00000376839 UNQ5815/PRO19632Q6UWF5 114 aa10.53□□□□□ -0.72
ACTN1-202ENST00000376839 EXOC3-AS1Q8N2X6 119 aa10.53□□□□□ -0.72
ACTN1-202ENST00000376839 TMEM70Q9BUB7 260 aa10.53□□□□□ -0.72
ACTN1-202ENST00000376839 MRPS16Q9Y3D3 137 aaKnown RBP10.53□□□□□ -0.72
ACTN1-202ENST00000376839 IGHV1-24A0A0C4DH33 117 aa10.53□□□□□ -0.72
ACTN1-202ENST00000376839 TEX22C9J3V5 150 aa10.53□□□□□ -0.72
ACTN1-202ENST00000376839 PSG1P11464 419 aa10.53□□□□□ -0.72
ACTN1-202ENST00000376839 CT83Q5H943 113 aa10.53□□□□□ -0.72
ACTN1-202ENST00000376839 Q86TA4 180 aa10.53□□□□□ -0.72
ACTN1-202ENST00000376839 OR4F17Q8NGA8 305 aa10.53□□□□□ -0.72
ACTN1-202ENST00000376839 DYNLRB1Q9NP97 96 aa10.53□□□□□ -0.72
ACTN1-202ENST00000376839 RBPMS2Q6ZRY4 209 aaKnown RBP10.52□□□□□ -0.73
ACTN1-202ENST00000376839 ASCL5Q7RTU5 278 aa10.52□□□□□ -0.73
ACTN1-202ENST00000376839 DAZAP1Q96EP5 407 aaKnown RBP10.52□□□□□ -0.73
ACTN1-202ENST00000376839 ASCL2Q99929 193 aa10.52□□□□□ -0.73
ACTN1-202ENST00000376839 KAAG1Q9UBP8 84 aa10.52□□□□□ -0.73
ACTN1-202ENST00000376839 HIGD1AQ9Y241 93 aa10.52□□□□□ -0.73
ACTN1-202ENST00000376839 F11RQ9Y624 299 aaKnown RBP10.52□□□□□ -0.73
ACTN1-202ENST00000376839 RIF1Q5UIP0 2472 aaKnown RBP10.52□□□□□ -0.73
ACTN1-202ENST00000376839 IGLC1P0CG04 106 aa10.52□□□□□ -0.73
ACTN1-202ENST00000376839 PLP1P60201 277 aa10.52□□□□□ -0.73
ACTN1-202ENST00000376839 PRRG2O14669 202 aa10.51□□□□□ -0.73
ACTN1-202ENST00000376839 KLK10O43240 276 aa10.51□□□□□ -0.73
ACTN1-202ENST00000376839 IGLV2-11P01706 119 aa10.51□□□□□ -0.73
ACTN1-202ENST00000376839 ZNF138P52744 262 aa10.51□□□□□ -0.73
ACTN1-202ENST00000376839 GOLT1AQ6ZVE7 132 aa10.51□□□□□ -0.73
ACTN1-202ENST00000376839 PRNTQ86SH4 94 aa10.51□□□□□ -0.73
ACTN1-202ENST00000376839 FBXL15Q9H469 300 aa10.51□□□□□ -0.73
ACTN1-202ENST00000376839 CSMD1Q96PZ7 3565 aa10.51□□□□□ -0.73
ACTN1-202ENST00000376839 IGHV1-3A0A0C4DH29 117 aa10.51□□□□□ -0.73
ACTN1-202ENST00000376839 OR4C46A6NHA9 309 aa10.51□□□□□ -0.73
ACTN1-202ENST00000376839 E7EQL1 145 aa10.51□□□□□ -0.73
ACTN1-202ENST00000376839 IGLV1-47P01700 117 aa10.51□□□□□ -0.73
ACTN1-202ENST00000376839 COL8A1P27658 744 aa10.51□□□□□ -0.73
ACTN1-202ENST00000376839 PPP1R27Q86WC6 154 aa10.51□□□□□ -0.73
ACTN1-202ENST00000376839 SLC25A39Q9BZJ4 359 aaPredicted RBP10.51□□□□□ -0.73
ACTN1-202ENST00000376839 SOX21Q9Y651 276 aaPredicted RBP10.51□□□□□ -0.73
ACTN1-202ENST00000376839 POLEQ07864 2286 aa10.5□□□□□ -0.73
ACTN1-202ENST00000376839 ZNF785A8K8V0 405 aa10.5□□□□□ -0.73
ACTN1-202ENST00000376839 NPIPB6E9PJ23 425 aa10.5□□□□□ -0.73
ACTN1-202ENST00000376839 LYNX1G3V0Z9 82 aa10.5□□□□□ -0.73
ACTN1-202ENST00000376839 LYNX1P0DP58 116 aa10.5□□□□□ -0.73
ACTN1-202ENST00000376839 OTORQ9NRC9 128 aa10.5□□□□□ -0.73
ACTN1-202ENST00000376839 INSIG2Q9Y5U4 225 aa10.5□□□□□ -0.73
ACTN1-202ENST00000376839 LOC102724200A0A096LPH7 203 aaPredicted RBP10.5□□□□□ -0.73
ACTN1-202ENST00000376839 C20orf202A1L168 122 aa10.5□□□□□ -0.73
ACTN1-202ENST00000376839 SHISA9B4DS77 424 aa10.5□□□□□ -0.73
ACTN1-202ENST00000376839 OVOL3O00110 214 aa10.5□□□□□ -0.73
ACTN1-202ENST00000376839 APOHP02749 345 aaPredicted RBP10.5□□□□□ -0.73
ACTN1-202ENST00000376839 GFRA4Q9GZZ7 299 aa10.5□□□□□ -0.73
ACTN1-202ENST00000376839 IGHV1-69-2A0A0G2JMI3 117 aa10.49□□□□□ -0.73
ACTN1-202ENST00000376839 hDV102S1A0JD36 115 aa10.49□□□□□ -0.73
ACTN1-202ENST00000376839 SYS1-DBNDD2H3BUS1 97 aa10.49□□□□□ -0.73
ACTN1-202ENST00000376839 CHEK1O14757 476 aa10.49□□□□□ -0.73
ACTN1-202ENST00000376839 COX7A1P24310 79 aa10.49□□□□□ -0.73
ACTN1-202ENST00000376839 CHCHD1Q96BP2 118 aaKnown RBP10.49□□□□□ -0.73
ACTN1-202ENST00000376839 C17orf77Q96MU5 243 aa10.49□□□□□ -0.73
ACTN1-202ENST00000376839 MCRIP2Q9BUT9 160 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms