RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 TMEM14CQ9P0S9 112 aa17.06■□□□□ 0.32
RNF39-202ENST00000376751 IGHV7-81A0A0B4J1V7 117 aa17.06■□□□□ 0.32
RNF39-202ENST00000376751 TOMM40O96008 361 aa17.06■□□□□ 0.32
RNF39-202ENST00000376751 SHANK2-AS3Q9BTD1 123 aa17.06■□□□□ 0.32
RNF39-202ENST00000376751 MRPL18Q9H0U6 180 aaKnown RBP17.06■□□□□ 0.32
RNF39-202ENST00000376751 SERTAD4Q9NUC0 356 aa17.06■□□□□ 0.32
RNF39-202ENST00000376751 KLF12Q9Y4X4 402 aa17.06■□□□□ 0.32
RNF39-202ENST00000376751 DOPEY1Q5JWR5 2465 aa17.05■□□□□ 0.32
RNF39-202ENST00000376751 SVEP1Q4LDE5 3571 aa17.05■□□□□ 0.32
RNF39-202ENST00000376751 SMIM27A0A1W2PRY6 76 aa17.05■□□□□ 0.32
RNF39-202ENST00000376751 TMEM8BA6NDV4 472 aa17.05■□□□□ 0.32
RNF39-202ENST00000376751 H3BRN7 92 aa17.05■□□□□ 0.32
RNF39-202ENST00000376751 SPINK4O60575 86 aa17.05■□□□□ 0.32
RNF39-202ENST00000376751 SLC35B1P78383 322 aa17.05■□□□□ 0.32
RNF39-202ENST00000376751 ZNF491Q8N8L2 437 aa17.05■□□□□ 0.32
RNF39-202ENST00000376751 C5orf17Q8NAS9 161 aa17.05■□□□□ 0.32
RNF39-202ENST00000376751 ZNF705GA8MUZ8 300 aaPredicted RBP17.04■□□□□ 0.32
RNF39-202ENST00000376751 BCL6BQ8N143 479 aaPredicted RBP17.04■□□□□ 0.32
RNF39-202ENST00000376751 MBD6Q96DN6 1003 aa17.04■□□□□ 0.32
RNF39-202ENST00000376751 ATG101Q9BSB4 218 aa17.04■□□□□ 0.32
RNF39-202ENST00000376751 CACNA1BQ00975 2339 aa17.04■□□□□ 0.32
RNF39-202ENST00000376751 LINC00587B1AMM8 73 aa17.04■□□□□ 0.32
RNF39-202ENST00000376751 NDUFB8O95169 186 aa17.04■□□□□ 0.32
RNF39-202ENST00000376751 UBE2G1P62253 170 aa17.04■□□□□ 0.32
RNF39-202ENST00000376751 FAM231DQ6ZW35 169 aa17.04■□□□□ 0.32
RNF39-202ENST00000376751 RNF125Q96EQ8 232 aa17.04■□□□□ 0.32
RNF39-202ENST00000376751 HSPB9Q9BQS6 159 aa17.04■□□□□ 0.32
RNF39-202ENST00000376751 WI2-2373I1.2A0A1W2PRP0 233 aa17.03■□□□□ 0.32
RNF39-202ENST00000376751 IL4P05112 153 aa17.03■□□□□ 0.32
RNF39-202ENST00000376751 HIST1H1EP10412 219 aaKnown RBP17.03■□□□□ 0.32
RNF39-202ENST00000376751 TMEM256Q8N2U0 113 aa17.03■□□□□ 0.32
RNF39-202ENST00000376751 PIP4P2Q8N4L2 257 aa17.03■□□□□ 0.32
RNF39-202ENST00000376751 GRIFINA4D1Z8 144 aa17.02■□□□□ 0.32
RNF39-202ENST00000376751 SNURFLB1AK76 121 aa17.02■□□□□ 0.32
RNF39-202ENST00000376751 IGHV3-23P01764 117 aa17.02■□□□□ 0.32
RNF39-202ENST00000376751 TCRAP04437 139 aa17.02■□□□□ 0.32
RNF39-202ENST00000376751 FAM106CPP0CH98 169 aa17.02■□□□□ 0.32
RNF39-202ENST00000376751 PRR27Q6MZM9 219 aa17.02■□□□□ 0.32
RNF39-202ENST00000376751 NUDT10Q8NFP7 164 aa17.02■□□□□ 0.32
RNF39-202ENST00000376751 NUDT11Q96G61 164 aa17.02■□□□□ 0.32
RNF39-202ENST00000376751 GNG7O60262 68 aa17.02■□□□□ 0.31
RNF39-202ENST00000376751 NUPR1O60356 82 aa17.02■□□□□ 0.31
RNF39-202ENST00000376751 RNF224P0DH78 156 aa17.02■□□□□ 0.31
RNF39-202ENST00000376751 MFAP4P55083 255 aa17.02■□□□□ 0.31
RNF39-202ENST00000376751 EXOC3-AS1Q8N2X6 119 aa17.02■□□□□ 0.31
RNF39-202ENST00000376751 GBGT1Q8N5D6 347 aa17.02■□□□□ 0.31
RNF39-202ENST00000376751 ZNF48Q96MX3 618 aaPredicted RBP17.02■□□□□ 0.31
RNF39-202ENST00000376751 OTORQ9NRC9 128 aa17.02■□□□□ 0.31
RNF39-202ENST00000376751 NPFFO15130 113 aa17.01■□□□□ 0.31
RNF39-202ENST00000376751 OR2J3O76001 311 aa17.01■□□□□ 0.31
RNF39-202ENST00000376751 USF2Q15853 346 aaPredicted RBP17.01■□□□□ 0.31
RNF39-202ENST00000376751 TMEM68Q96MH6 324 aa17.01■□□□□ 0.31
RNF39-202ENST00000376751 C17orf77Q96MU5 243 aa17.01■□□□□ 0.31
RNF39-202ENST00000376751 TP53TG3Q9ULZ0 132 aa17.01■□□□□ 0.31
RNF39-202ENST00000376751 GATCO43716 136 aaKnown RBP17■□□□□ 0.31
RNF39-202ENST00000376751 HLA-DRB1P01911 266 aa17■□□□□ 0.31
RNF39-202ENST00000376751 MRPL54Q6P161 138 aaKnown RBP17■□□□□ 0.31
RNF39-202ENST00000376751 TMEM136Q6ZRR5 245 aa17■□□□□ 0.31
RNF39-202ENST00000376751 MLST8Q9BVC4 326 aa17■□□□□ 0.31
RNF39-202ENST00000376751 GNB1LQ9BYB4 327 aa17■□□□□ 0.31
RNF39-202ENST00000376751 C21orf62Q9NYP8 219 aa17■□□□□ 0.31
RNF39-202ENST00000376751 MRPS12O15235 138 aaKnown RBP17■□□□□ 0.31
RNF39-202ENST00000376751 IGLC2P0DOY2 106 aa17■□□□□ 0.31
RNF39-202ENST00000376751 Q56UQ5 140 aa17■□□□□ 0.31
RNF39-202ENST00000376751 TRBV9A0A0B4J1U6 114 aa16.99■□□□□ 0.31
RNF39-202ENST00000376751 CENPVL3A0A0U1RRI6 287 aa16.99■□□□□ 0.31
RNF39-202ENST00000376751 LTAP01374 205 aa16.99■□□□□ 0.31
RNF39-202ENST00000376751 LINC00310P59036 64 aa16.99■□□□□ 0.31
RNF39-202ENST00000376751 LINC00322Q6ZN03 302 aaPredicted RBP16.99■□□□□ 0.31
RNF39-202ENST00000376751 Q71RC1 249 aaPredicted RBP16.99■□□□□ 0.31
RNF39-202ENST00000376751 FMC1Q96HJ9 113 aa16.99■□□□□ 0.31
RNF39-202ENST00000376751 GPR82Q96P67 336 aa16.99■□□□□ 0.31
RNF39-202ENST00000376751 POLR3KQ9Y2Y1 108 aaPredicted RBP16.99■□□□□ 0.31
RNF39-202ENST00000376751 TRBV19A0A075B6N1 114 aa16.98■□□□□ 0.31
RNF39-202ENST00000376751 TRAV30A0A087WSZ9 112 aa16.98■□□□□ 0.31
RNF39-202ENST00000376751 IGHV4-61A0A0C4DH41 118 aa16.98■□□□□ 0.31
RNF39-202ENST00000376751 IZUMO1RA6ND01 250 aa16.98■□□□□ 0.31
RNF39-202ENST00000376751 GRAMD2BQ96HH9 432 aa16.98■□□□□ 0.31
RNF39-202ENST00000376751 CCL19Q99731 98 aa16.98■□□□□ 0.31
RNF39-202ENST00000376751 C1RLQ9NZP8 487 aa16.98■□□□□ 0.31
RNF39-202ENST00000376751 USP24Q9UPU5 2620 aa16.98■□□□□ 0.31
RNF39-202ENST00000376751 SPG11Q96JI7 2443 aa16.98■□□□□ 0.31
RNF39-202ENST00000376751 VPS13CQ709C8 3753 aa16.98■□□□□ 0.31
RNF39-202ENST00000376751 BRS3P32247 399 aa16.98■□□□□ 0.31
RNF39-202ENST00000376751 BPIFA4PQ86YQ2 179 aa16.98■□□□□ 0.31
RNF39-202ENST00000376751 PRDM13Q9H4Q3 707 aa16.98■□□□□ 0.31
RNF39-202ENST00000376751 IGHV3OR16-10A0A075B7F0 116 aa16.97■□□□□ 0.31
RNF39-202ENST00000376751 TRAV8-1A0A0A6YYK1 113 aa16.97■□□□□ 0.31
RNF39-202ENST00000376751 SH2D7A6NKC9 451 aaPredicted RBP16.97■□□□□ 0.31
RNF39-202ENST00000376751 AMY1AP04745 511 aa16.97■□□□□ 0.31
RNF39-202ENST00000376751 FCGR2BP31994 310 aaPredicted RBP16.97■□□□□ 0.31
RNF39-202ENST00000376751 Q86TA4 180 aa16.97■□□□□ 0.31
RNF39-202ENST00000376751 OR2T8A6NH00 312 aa16.97■□□□□ 0.31
RNF39-202ENST00000376751 IGLV2-11P01706 119 aa16.97■□□□□ 0.31
RNF39-202ENST00000376751 PAX8Q06710 450 aa16.97■□□□□ 0.31
RNF39-202ENST00000376751 JOSD1Q15040 202 aaPredicted RBP16.97■□□□□ 0.31
RNF39-202ENST00000376751 DNLZQ5SXM8 178 aa16.97■□□□□ 0.31
RNF39-202ENST00000376751 TMEM18Q96B42 140 aa16.97■□□□□ 0.31
RNF39-202ENST00000376751 SMIM12Q96EX1 92 aa16.97■□□□□ 0.31
RNF39-202ENST00000376751 NAT8BQ9UHF3 227 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms